EY729956

Overview
NameEY729956
Unique NameEY729956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY729956 vs. ExPASy Swiss-Prot
Match: OPD22_ARATH (Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At3g13930 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.406e-17
Identity = 61/136 (44.85%), Postives = 74/136 (54.41%), Query Frame = 1 
Query:  190 ASHIINHSKKLKNVSNLLWHENAVLVRWFSNDAVSS---RDDLLKIHRHVYVPVESERXXXXXXXXXXXXXXXXXXXXXXXARKAGSPIAGSFLNRGFACSKVHLKRGFSSDSGLPPHQEIGMASLSPTVQEGNVA 588
            AS IINHSKKLK+VS LL  ++AV VR FSN    S   R+D+ K   + Y  VE                          + K  SP+AG  L + F  S++   RGFSS S LPPHQEIGM SLSPT+ EGN+A
Sbjct:    2 ASRIINHSKKLKHVSALLRRDHAVAVRCFSNSTHPSLVGREDIFKARLN-YSSVER-------ISKCGTGNVTMLSGISTTSTKLSSPMAGPKLFKEFISSQMRSVRGFSSSSDLPPHQEIGMPSLSPTMTEGNIA 129
[Close]
BLAST of EY729956 vs. ExPASy Swiss-Prot
Match: OPD23_ARATH (Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.560e-16
Identity = 61/138 (44.20%), Postives = 74/138 (53.62%), Query Frame = 1 
Query:  181 MAYASHIINHSKKLKNVSNLLWHENAVLVRWFSND--AVSSRDDLLKIHRHVYVPVESERXXXXXXXXXXXXXXXXXXXXXXXARKAGSPIAGSFLNRGFACSKVHLKRGFSSDSGLPPHQEIGMASLSPTVQEGNVA 588
            MAYAS IINHSKKLK+VS LL  ENA  +R++SN   A  +R+D     R  Y P+E                          +   G PI G    + F+C  +   RGFSS S LPPHQEIGM SLSPT+ EGN+A
Sbjct:    1 MAYASRIINHSKKLKDVSTLLRRENAATIRYYSNTNRAPLNREDTFN-SRLGYPPLER---ISICSTSTLPVSIIFSTTRSNLSSAMGRPIFG----KEFSCL-MQSARGFSSGSDLPPHQEIGMPSLSPTMTEGNIA 129
The following BLAST results are available for this feature:
BLAST of EY729956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
OPD22_ARATH2.406e-1744.85Dihydrolipoyllysine-residue acetyltransferase comp... [more]
OPD23_ARATH1.560e-1644.20Dihydrolipoyllysine-residue acetyltransferase comp... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-023-E12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729956 ID=EY729956; Name=EY729956; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGAATAAATTCACGTTTTTAACCAAACTAAATCAGACCCTC
TTTGATTCCTACTCTGTTCGTTCATCTCTCACTAAAAAAGCAATTTAAAA
AAAAAAAAACTATTTTTCTTGCTGAATTTTCATTGCTCTTTTTCTGTTGA
TTTTTTTAGTGGTTTTTGGAAATATTAGTCATGGCGTATGCATCTCACAT
CATCAATCACTCTAAAAAGTTGAAGAATGTTTCAAATTTGCTGTGGCATG
AGAATGCTGTTTTGGTTCGTTGGTTTTCAAATGATGCTGTTAGTAGCAGG
GATGATCTTCTAAAGATTCATCGCCATGTATATGTGCCTGTGGAGAGTGA
AAGAGTCATTAATTCATCCGCCATTAGCTCTGTATCATCAGTAGGTGTAT
TTAAGAAAAAATTTTGTAGTGTGGCAAGAAAAGCCGGAAGTCCCATTGCT
GGATCTTTCCTCAACAGAGGATTTGCATGTTCAAAAGTACACTTGAAGAG
AGGATTTTCGTCAGATTCAGGTCTTCCTCCACACCAGGAGATTGGAATGG
CCTCCCTTTCACCCACAGTGCAAGAGGGTAATGTTGCTCGGGTGGTTGAG
AAAAGAGGGCGAAACAGGGGTGGCCGGGTGAATTCTCGGTGGAAGTTGAA
GGGGAGGGAGGAGGTGTGGGGATCGGGTGGTAGGGAGGGAGGTGGTGGGG
CGCGGAGGTGGAGGGGGAAGGGTTACGGGAAGGGGAGGTGGGGGGGGGTG
GGGGTGAGTGGCTGGGAGGACCGGTGACATGTGGTGGGCGAGGAGGGGGC
TGGGGGGGGGGGGGCGGTCGCGGGGGGGGGGAGGGATGGAACGCGAGCAC
CGCCCCGCGGCTTATGGTCGTGGGTGGAGTGGGTTCACGTAGTTGCTTGT
T
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