EY728915

Overview
NameEY728915
Unique NameEY728915
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728915_ssr761 microsatellite EY728915_ssr761:761..772. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2694 contig Csv1_Contig2694:103..925. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA1B_ORYSJ (Importin subunit alpha-1b OS=Oryza sativa subsp. japonica GN=Os05g0155500 PE=1 SV=2)

HSP 1 Score: 298.901 bits (764), Expect = 2.252e-80
Identity = 143/171 (83.63%), Postives = 158/171 (92.40%), Query Frame = 3
Query:   24 LSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETMPPGD 536
            L+ N+KKSIKKEACWT+SNITAGNREQIQAVI ANII PLV LL+ AEFDIKKEAAWAISNATSGGTH+QIK+LV QGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLG  DVN + QMIDDAEGLEKIE+LQ+HDN EIYEK+VK+LE+YWL++ED+ MP GD
Sbjct:  341 LTNNHKKSIKKEACWTISNITAGNREQIQAVINANIIAPLVHLLQTAEFDIKKEAAWAISNATSGGTHDQIKYLVAQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGAGDVNSYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKMLESYWLEEEDDAMPSGD 511          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA1_ARATH (Importin subunit alpha-1 OS=Arabidopsis thaliana GN=KAP1 PE=2 SV=2)

HSP 1 Score: 287.345 bits (734), Expect = 6.781e-77
Identity = 137/173 (79.19%), Postives = 161/173 (93.06%), Query Frame = 3
Query:   24 LSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNT-DVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDE--TMPPG 533
            L+ N+KKSIKKEACWT+SNITAGN++QIQ V+EAN+I PLV+LL+NAEFDIKKEAAWAISNATSGG+H+QIK+LV QGCIKPLCDLLVCPDPRI+TVCLEGLENILKVGEAEKNLG+T D+N + Q+IDDAEGLEKIE+LQ+HDN EIYEK+VK+LETYWL++ED+    PPG
Sbjct:  335 LTQNHKKSIKKEACWTISNITAGNKDQIQTVVEANLISPLVSLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVEQGCIKPLCDLLVCPDPRIITVCLEGLENILKVGEAEKNLGHTGDMNYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEEDDETQQPPG 507          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA_SOLLC (Importin subunit alpha OS=Solanum lycopersicum PE=2 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 1.279e-75
Identity = 136/165 (82.42%), Postives = 154/165 (93.33%), Query Frame = 3
Query:   24 LSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTD-VNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDED 515
            L+ NYKKSIKKEACWT+SNITAGNR QIQ VIEA II PLV LL+NAEF+IKKEAAWAISNATSGG H+QIKFLV QGCIKPLCDLLVCPDPRIVTVCLEGLENILK+GEA+K+LGNT+ VNV+ Q+ID+AEGLEKIE+LQ+HDN EIYEK+VK+LETYWL++ED
Sbjct:  336 LTQNYKKSIKKEACWTISNITAGNRNQIQIVIEAGIIAPLVYLLQNAEFEIKKEAAWAISNATSGGNHDQIKFLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKIGEADKDLGNTEGVNVYAQLIDEAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEED 500          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA1A_ORYSJ (Importin subunit alpha-1a OS=Oryza sativa subsp. japonica GN=Os01g0253300 PE=1 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 5.373e-74
Identity = 132/167 (79.04%), Postives = 152/167 (91.02%), Query Frame = 3
Query:   24 LSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDETM 524
            L+ N KKSIKKEACWT+SNITAGN++QIQAVI A IIGPLV LL+ AEFDIKKEAAWAISNATSGG+H+QIK+LV +GCIKPLCDLL+CPD RIVTVCLEGLENILKVGE +K L   DVNVF+QMID+AEGLEKIE+LQ+HDN EIYEK+VK+LE YW+D+ED+TM
Sbjct:  335 LTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHDNNEIYEKAVKILEAYWMDEEDDTM 501          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA2_ARATH (Importin subunit alpha-2 OS=Arabidopsis thaliana GN=KAP2 PE=1 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 2.855e-67
Identity = 121/166 (72.89%), Postives = 147/166 (88.55%), Query Frame = 3
Query:   24 LSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNT-DVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYWLDDEDE 518
            L  NYKKSIKKEACWT+SNITAGN +QIQAVI+A II  LV +L++AEF++KKEAAW ISNATSGGTH+QIKF+V QGCIKPLCDLL CPD ++VTVCLE LENIL VGEAEKNLG+T + N++ QMID+AEGLEKIE+LQ+HDN +IY+K+VK+LET+W +D +E
Sbjct:  338 LKNNYKKSIKKEACWTISNITAGNADQIQAVIDAGIIQSLVWVLQSAEFEVKKEAAWGISNATSGGTHDQIKFMVSQGCIKPLCDLLTCPDLKVVTVCLEALENILVVGEAEKNLGHTGEDNLYAQMIDEAEGLEKIENLQSHDNNDIYDKAVKILETFWTEDNEE 503          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA1_PONAB (Importin subunit alpha-1 OS=Pongo abelii GN=KPNA1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.428e-50
Identity = 98/165 (59.39%), Postives = 127/165 (76.97%), Query Frame = 3
Query:   39 KKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYW-LDDEDETMPP 530
            K+SIKKEACWT+SNITAGNR QIQ VI+ANI   L+++L+ AEF  +KEAAWAI+NATSGG+ EQIK+LV  GCIKPLCDLL   D +IV V L GLENIL++GE E     T +N +  +I++A GL+KIE LQ+H+N EIY+K+  L+E Y+  +DED ++ P
Sbjct:  351 KESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTEDEDSSIAP 515          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA1_HUMAN (Importin subunit alpha-1 OS=Homo sapiens GN=KPNA1 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.428e-50
Identity = 98/165 (59.39%), Postives = 127/165 (76.97%), Query Frame = 3
Query:   39 KKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYW-LDDEDETMPP 530
            K+SIKKEACWT+SNITAGNR QIQ VI+ANI   L+++L+ AEF  +KEAAWAI+NATSGG+ EQIK+LV  GCIKPLCDLL   D +IV V L GLENIL++GE E     T +N +  +I++A GL+KIE LQ+H+N EIY+K+  L+E Y+  +DED ++ P
Sbjct:  351 KESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTEDEDSSIAP 515          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA1_BOVIN (Importin subunit alpha-1 OS=Bos taurus GN=KPNA1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.428e-50
Identity = 98/165 (59.39%), Postives = 127/165 (76.97%), Query Frame = 3
Query:   39 KKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYW-LDDEDETMPP 530
            K+SIKKEACWT+SNITAGNR QIQ VI+ANI   L+++L+ AEF  +KEAAWAI+NATSGG+ EQIK+LV  GCIKPLCDLL   D +IV V L GLENIL++GE E     T +N +  +I++A GL+KIE LQ+H+N EIY+K+  L+E Y+  +DED ++ P
Sbjct:  351 KESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTEDEDSSIAP 515          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA7_MOUSE (Importin subunit alpha-7 OS=Mus musculus GN=Kpna6 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.142e-50
Identity = 98/170 (57.65%), Postives = 130/170 (76.47%), Query Frame = 3
Query:   24 LSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYW-LDDEDETMPP 530
            L  + K+SI+KEACWT+SNITAGNR QIQAVI+ANI   L+ +L+ AEF  +KEAAWAI+NATSGGT EQI++LV  GCIKPLCDLL   D +IV V L GLENIL++GE E     + VN +  +I++A GL+KIE LQ+H+N EIY+K+  L+E Y+ ++D+D ++ P
Sbjct:  344 LLSSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQESKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAP 513          
BLAST of EY728915 vs. ExPASy Swiss-Prot
Match: IMA7_BOVIN (Importin subunit alpha-7 OS=Bos taurus GN=KPNA6 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.066e-50
Identity = 98/170 (57.65%), Postives = 130/170 (76.47%), Query Frame = 3
Query:   24 LSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVTLLENAEFDIKKEAAWAISNATSGGTHEQIKFLVIQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGNTDVNVFTQMIDDAEGLEKIESLQTHDNAEIYEKSVKLLETYW-LDDEDETMPP 530
            L  + K+SI+KEACWT+SNITAGNR QIQAVI+ANI   L+ +L+ AEF  +KEAAWAI+NATSGGT EQI++LV  GCIKPLCDLL   D +IV V L GLENIL++GE E     + VN +  +I++A GL+KIE LQ+H+N EIY+K+  L+E Y+ ++D+D ++ P
Sbjct:  344 LLSSSKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDDDSSLAP 513          
The following BLAST results are available for this feature:
BLAST of EY728915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
IMA1B_ORYSJ2.252e-8083.63Importin subunit alpha-1b OS=Oryza sativa subsp. j... [more]
IMA1_ARATH6.781e-7779.19Importin subunit alpha-1 OS=Arabidopsis thaliana G... [more]
IMA_SOLLC1.279e-7582.42Importin subunit alpha OS=Solanum lycopersicum PE=... [more]
IMA1A_ORYSJ5.373e-7479.04Importin subunit alpha-1a OS=Oryza sativa subsp. j... [more]
IMA2_ARATH2.855e-6772.89Importin subunit alpha-2 OS=Arabidopsis thaliana G... [more]
IMA1_PONAB2.428e-5059.39Importin subunit alpha-1 OS=Pongo abelii GN=KPNA1 ... [more]
IMA1_HUMAN2.428e-5059.39Importin subunit alpha-1 OS=Homo sapiens GN=KPNA1 ... [more]
IMA1_BOVIN2.428e-5059.39Importin subunit alpha-1 OS=Bos taurus GN=KPNA1 PE... [more]
IMA7_MOUSE4.142e-5057.65Importin subunit alpha-7 OS=Mus musculus GN=Kpna6 ... [more]
IMA7_BOVIN7.066e-5057.65Importin subunit alpha-7 OS=Bos taurus GN=KPNA6 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-C09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728915 ID=EY728915; Name=EY728915; organism=Citrus sinensis; type=EST; length=823bp
CCACGCGTCCGCGGACGCGTGGGTTGTCGGGCAATTATAAAAAGAGCATT
AAAAAGGAAGCTTGTTGGACTGTCTCGAATATCACCGCTGGCAACAGGGA
GCAAATTCAGGCTGTGATTGAGGCTAACATAATTGGCCCCCTTGTTACTC
TACTTGAAAATGCTGAGTTTGACATAAAGAAAGAGGCCGCATGGGCTATC
TCAAACGCCACATCTGGTGGTACTCATGAGCAAATCAAATTCCTTGTGAT
TCAAGGGTGCATCAAGCCCTTGTGTGATCTTCTTGTATGTCCCGATCCAA
GAATTGTTACCGTCTGTTTGGAAGGGCTTGAGAACATATTGAAGGTGGGA
GAAGCCGAAAAGAATTTGGGCAACACAGATGTAAATGTCTTTACTCAAAT
GATTGATGATGCTGAGGGGTTAGAGAAAATTGAGAGTTTACAAACTCACG
ACAATGCTGAGATTTATGAGAAGTCTGTAAAGCTTCTGGAAACATATTGG
TTGGATGACGAGGATGAGACAATGCCACCAGGGGATGCTTCTCAACCTGG
TTTCGGATTTGGAGGCAATGGGAATCCTCCTGCTCCATCCGGTGGNCTTC
ATTTCAGCTAGAGGAGTTTTAGCTGCTTTCATGTTGAAGTCCATGTGACA
AATTAATTCAGGAGTTTTAGCTGCTTTCATGTTGAAGTCCTGTGGAGTAT
GATGGTGTTGGATCTTGTTAGGTGGTGGTTGTGTCATATTTGGTCCATTC
AGTCCATCTCTGTGTGTGTGTGAGTTTGGAGGATGATANCTCAATTCGAA
CATGCTGCTGCGATCAAAATACT
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