EY728906

Overview
NameEY728906
Unique NameEY728906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11791 contig Csv1_Contig11791:1..887. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 7.817e-98
Identity = 166/218 (76.15%), Postives = 184/218 (84.40%), Query Frame = 2
Query:   83 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQF 733
            G WINAHATFY              YGNLYSQGYG  TAALSTALF+ GLSCGACF++MC NDPQWC++G SI+VTATNFCPPGG CDPPNHHFDLSQP+++ IA Y++GI+PV+YRRVRCKR+GGIRFTINGHSYFNLVL+TNVGGAGDV +VS+KGSRTKWQ MSRNWG    SNSYLNGQSLSFVVTTS   SVVS+NVAPP WSFGQTYTG QF
Sbjct:   36 GPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPPGGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQF 253          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 350.903 bits (899), Expect = 5.602e-96
Identity = 170/248 (68.55%), Postives = 189/248 (76.21%), Query Frame = 2
Query:   17 KMALWVILCVGFLSLVSSVQGY-GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQF 733
            KM L  I    F ++V SV GY  GW+NAHATFY              YGNLYSQGYGTNTAALSTALFNNGLSCGACF+I C +D  WCL G+IIVTATNFCPP        GGWC+PP HHFDLSQPVFQ IAQY+AG+VPV YRRV C R GGIRFTINGHSYFNLVL+TNVGGAGDV +V++KGSRT+WQ MSRNWG    SN+ LNGQ+LSF VT S G +VVS N+AP  WSFGQT+TGRQF
Sbjct:    5 KMGLLGIALFCFAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQF 252          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 8.089e-95
Identity = 170/243 (69.96%), Postives = 189/243 (77.78%), Query Frame = 2
Query:   32 VILCVGFLSLVSSVQGYGG-WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQF 733
            V++ VG ++  SSV GYGG WINAHATFY              YGNLYSQGYGT+TAALSTALFNNGLSCG+CF+I C ND +WCL GSI+VTATNFCPP        GGWC+PP  HFDL+QPVFQ IAQYRAGIVPV YRRV C+R GGIRFTINGHSYFNLVLITNVGGAGDV + +IKGSRT WQ MSRNWG    SNSYLNGQ+LSF VTTS G +VVS+N AP  WS+GQT+ G QF
Sbjct:    8 VMIMVGVMA--SSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQF 248          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 1.056e-94
Identity = 173/248 (69.76%), Postives = 186/248 (75.00%), Query Frame = 2
Query:   20 MALWVILCVGFL-SLVSSVQGY--GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQ 730
            MAL   L +  L ++ S V GY  GGW+NAHATFY              YGNLYSQGYGTNTAALSTALFNNGLSCGACF+I C ND +WCL GSI+VTATNFCPP        GGWC+PP  HFDLSQPVFQ IAQYRAGIVPV YRRV C R GGIRFTINGHSYFNLVLITNVGGAGDV +  +KGSRT WQ MSRNWG    SNSYLNGQSLSF VTTS G ++VS NVA   WSFGQT+TG Q
Sbjct:    1 MALVTFLFIATLGAMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTGAQ 248          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.889e-89
Identity = 156/243 (64.20%), Postives = 180/243 (74.07%), Query Frame = 2
Query:   32 VILCVGFLSLVSSVQGYG-GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQF 733
            + L +  + +  SV GY  GW+NA ATFY              YGNLYSQGYGTNTAALSTALFN G SCGACFQI C +DP+WC+ G+I VT TNFCPP        GGWC+PP HHFDL+QP+F  IAQY+AG+VPV YRRV C+R GGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ T+WQ MSRNWG    SN+ L+GQ+LSF VTTS G +V+S N  P  WSFGQTYTG+QF
Sbjct:    9 ISLSLMMMIMWKSVDGYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQF 251          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 8.108e-87
Identity = 154/246 (62.60%), Postives = 181/246 (73.58%), Query Frame = 2
Query:   20 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQF 733
            MA+  +L + FL+  +S  GYGGW +AHATFY              YGNLYSQGYGTNTAALSTALFN+G +CG+C+++ C N    CL GSI VTATNFCPP        GGWC+PP  HFD+++P F HIAQYRAGIVPV +RRV C + GG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKGSRT WQPMSRNWG    SN++L+GQSLSF VT S G +V S NVA P W FGQT+ G QF
Sbjct:    1 MAIAGVLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 8.108e-87
Identity = 154/246 (62.60%), Postives = 181/246 (73.58%), Query Frame = 2
Query:   20 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQF 733
            MA+  +L + FL+  +S  GYGGW +AHATFY              YGNLYSQGYGTNTAALSTALFN+G +CG+C+++ C N    CL GSI VTATNFCPP        GGWC+PP  HFD+++P F HIAQYRAGIVPV +RRV C + GG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKGSRT WQPMSRNWG    SN++L+GQSLSF VT S G +V S NVA P W FGQT+ G QF
Sbjct:    1 MAIAGVLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.691e-84
Identity = 153/243 (62.96%), Postives = 175/243 (72.02%), Query Frame = 2
Query:   32 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTK-WQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQF 733
            +I  +  L L  +    GGW   HATFY              YGNLY QGYGTNTAALSTALFNNGL+CGAC+++ C +DP+WCL  +I VTATNFCPP        GGWC+PP  HFDL++P F  IAQYRAGIVPV +RRV C + GGIRFTINGHSYFNLVLI+NVGGAGDV AVSIKGS+T+ WQ MSRNWG    SNSY+N QSLSF VTTS G ++VS +VAP  W FGQTY G QF
Sbjct:   11 IISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQF 253          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 1.026e-81
Identity = 147/250 (58.80%), Postives = 173/250 (69.20%), Query Frame = 2
Query:   20 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQFDI 739
            MA+ V+      + +  V   G WINAHATFY              YGNLYSQGYG NTAALSTALFNNGLSCG+CF++ C NDP WCL G  SI++TATNFCPP        GGWC+PP  HFDL+ P+F  IA+Y+AGIVPV YRR+ C++ GGIRFTING  YFNLVL+TNV GAGDV  VS+KGS T+W  +SRNWG    SN+ L GQSLSF V TS G S  S N+AP  W FGQTY+G+ F +
Sbjct:    9 MAVMVVTAFTANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNFRV 258          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.340e-81
Identity = 144/236 (61.02%), Postives = 166/236 (70.34%), Query Frame = 2
Query:   62 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQFDI 739
            +  +   G W NAHATFY              YGNLYSQGYGTNTAALSTALFNNG+SCGACF++ CANDPQWC  GS  I++TATNFCPP        GGWC+PP  HFDL+ PVF  IAQYRAGIVPV YRRV C++ GGIRFTINGH YFNLVLITNV GAGD+   S+KGSRT W  +SRNWG    SN+ L GQ+LSF VT S   +  S+N+ P  W FGQT+ G+ F +
Sbjct:   22 IPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNFRV 257          
The following BLAST results are available for this feature:
BLAST of EY728906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
EXPA5_ARATH7.817e-9876.15Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXP15_ARATH5.602e-9668.55Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXP10_ARATH8.089e-9569.96Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXPA1_ARATH1.056e-9469.76Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP14_ARATH3.889e-8964.20Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA4_ORYSJ8.108e-8762.60Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI8.108e-8762.60Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA8_ARATH1.691e-8462.96Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXPA9_ARATH1.026e-8158.80Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]
EXPA4_ARATH1.340e-8161.02Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728906 ID=EY728906; Name=EY728906; organism=Citrus sinensis; type=EST; length=883bp
CACGCGTCCGGAAAAAAAAATGGCTCTTTGGGTGATTCTTTGTGTTGGGT
TTCTCTCATTGGTCTCATCCGTTCAAGGTTATGGAGGTTGGATTAATGCT
CATGCAACTTTCTATGGAGGTGGTGATGCTTCTGGCACAATGGGGGGCGC
TTGTGGGTACGGCAATTTGTACAGCCAAGGTTATGGTACTAATACCGCAG
CACTTAGCACTGCTTTGTTCAACAATGGCCTAAGTTGTGGAGCTTGCTTT
CAAATTATGTGCGCTAATGACCCGCAATGGTGCCTGCGTGGCTCCATCAT
TGTCACTGCCACTAACTTTTGCCCTCCTGGAGGCTGGTGTGATCCTCCTA
ACCACCACTTTGATCTCTCTCAGCCTGTCTTCCAACACATTGCCCAGTAT
AGAGCTGGTATTGTTCCTGTAATCTACAGAAGGGTGAGATGCAAGAGAAA
TGGGGGCATAAGGTTCACAATCAATGGCCATTCTTACTTCAATTTAGTTC
TAATAACAAACGTGGGTGGAGCTGGTGACGTGCGTGCTGTATCCATCAAA
GGTTCAAGGACTAAATGGCAACCGATGTCGAGAAACTGGGGCCCAAAACT
GGCAAGCAACTCGTATCTTAATGGACAAAGCCTCTCTTTTGTTGTGACCA
CAAGTTATGGCCACAGTGTTGTTTCTTACAATGTTGCCCCTCCTAAGTGG
TCATTTGGGCAGACTTATACCGGCAGACAATTCGATATTAGGCTTATTTA
AGTTAAAATCAGCAACCCTTTTAGTATTTTAATTAGCTCTAGCGATATGG
GTGCGTACAAATAATTCTGAATTGGCCCTATGTGCTTTATACCTTTTGAA
AGTGTTGCTGCGTTTTCATCTTTACTGAATGTG
back to top