EY728869

Overview
NameEY728869
Unique NameEY728869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length675
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728869 vs. ExPASy Swiss-Prot
Match: YGBK_ECOLI (Uncharacterized protein ygbK OS=Escherichia coli (strain K12) GN=ygbK PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.567e-31
Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = 3
Query:  204 LGCIADDFTGATDLANMLVRGGMRTVQSIGIPSDEVAAGLDADAIVIALKSRTLPVADAIADSLAALEWLRAQGCEQ 434
            +G IADDFTGATD+A+ LV  G+ TVQ  G+P+ ++   +  DA+VI+LK+R+ PV +A   SLAAL WL+ QGC+Q
Sbjct:    4 IGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAI--DALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQ 78          

HSP 2 Score: 56.225 bits (134), Expect = 1.567e-31
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 2
Query:  422 GLRADFFKYCSTFDSTSAGNIGQVSEALLKALGSDFTLACPAFP 553
            G +  +FKYCSTFDST+ GNIG V++AL+ AL + FT+  PA P
Sbjct:   75 GCKQIYFKYCSTFDSTAKGNIGPVTDALMDALDTPFTVFSPALP 118          

HSP 3 Score: 38.1206 bits (87), Expect = 1.567e-31
Identity = 15/29 (51.72%), Postives = 22/29 (75.86%), Query Frame = 1
Query:  541 PGISGNGRTIFRGHLFVQEPVLNESGMQH 627
            P +  NGRT+++G+LFV   +L ESGM+H
Sbjct:  115 PALPVNGRTVYQGYLFVMNQLLAESGMRH 143          
BLAST of EY728869 vs. ExPASy Swiss-Prot
Match: Y1011_HAEIN (Uncharacterized protein HI1011 OS=Haemophilus influenzae GN=HI1011 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.266e-30
Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 3
Query:  201 LLGCIADDFTGATDLANMLVRGGMRTVQSIGIPSDEVAAGLDADAIVIALKSRTLPVADAIADSLAALEWLRAQGCEQ 434
            +LG IADDFTGA+D+A+ LV  G+ TVQ  G+P+  + +    DAIVI+LKSR+ PV +AI  SL A +WL+  GC Q
Sbjct:    1 MLGVIADDFTGASDIASFLVENGLSTVQMNGVPTQSLNS--KVDAIVISLKSRSNPVNEAIEQSLRAYQWLKENGCTQ 76          

HSP 2 Score: 56.9954 bits (136), Expect = 1.266e-30
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 2
Query:  437 FFKYCSTFDSTSAGNIGQVSEALLKALGSDFTLACPAFP 553
            +FKYCSTFDST+ GNIG V++ALL  L  DFT+  PA P
Sbjct:   78 YFKYCSTFDSTAKGNIGPVTDALLDELNEDFTVITPALP 116          

HSP 3 Score: 37.3502 bits (85), Expect = 1.266e-30
Identity = 16/29 (55.17%), Postives = 23/29 (79.31%), Query Frame = 1
Query:  541 PGISGNGRTIFRGHLFVQEPVLNESGMQH 627
            P +  NGRTIF G+LFV + +L+ESGM++
Sbjct:  113 PALPVNGRTIFNGYLFVGDVLLSESGMKN 141          
BLAST of EY728869 vs. ExPASy Swiss-Prot
Match: YGBJ_ECOLI (Uncharacterized oxidoreductase ygbJ OS=Escherichia coli (strain K12) GN=ygbJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 2
Query:    5 DTARASKFPLPLSATAHQMFMQASSAGFGREDDSAVIKIFPGIELPTAK 151
            DTA+A  FPLPL++TA  MF  AS+AG+G+EDDSAVIKIF GI LP AK
Sbjct:  253 DTAKALHFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGITLPGAK 301          
The following BLAST results are available for this feature:
BLAST of EY728869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
YGBK_ECOLI1.567e-3153.25Uncharacterized protein ygbK OS=Escherichia coli (... [more]
Y1011_HAEIN1.266e-3052.56Uncharacterized protein HI1011 OS=Haemophilus infl... [more]
YGBJ_ECOLI2.056e-1169.39Uncharacterized oxidoreductase ygbJ OS=Escherichia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-F08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728869 ID=EY728869; Name=EY728869; organism=Citrus sinensis; type=EST; length=675bp
GCTGGATACCGCACGGGCCAGCAAGTTTCCGCTGCCGCTGTCGGCCACCG
CGCACCAGATGTTCATGCAGGCCTCCAGCGCCGGTTTCGGGCGTGAGGAC
GATTCGGCGGTGATCAAGATTTTCCCGGGCATCGAACTGCCGACCGCCAA
ACCTGACTCCGTATAAGGACCGCGCCATGAACCGACCTGCCGCACGCCCA
TTGCTGGGCTGCATCGCCGACGATTTCACCGGTGCCACCGACCTCGCCAA
TATGCTGGTGCGCGGCGGAATGCGTACGGTGCAGAGCATTGGCATTCCGA
GCGACGAAGTCGCGGCCGGGCTGGACGCAGACGCAATCGTCATTGCCCTG
AAATCCCGCACCCTGCCGGTTGCCGACGCCATCGCCGACTCCCTGGCCGC
CCTGGAATGGCTGCGCGCACAGGGTTGCGAGCAGATTTCTTCAAGTACTG
CTCCACGTTCGACTCGACGTCCGCCGGCAATATCGGCCAGGTCAGCGAAG
CGCTGCTCAAGGCGCTGGGCAGTGACTTCACCCTCGCCTGCCCGGCATTT
CCGGAAACGGCCGGACGATCTTCCGTGGCCATTTGTTCGTGCAAGAACCA
GTACTCAACGAGTCGGGCATGCAGCACATCCGCTGACCCCCATAACGATG
CACTGTCGGTGCTGATCCACTCGCA
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