EY728861

Overview
NameEY728861
Unique NameEY728861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728861 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.541e-22
Identity = 92/299 (30.77%), Postives = 131/299 (43.81%), Query Frame = 2
Query:   23 NGSENDSSSGDELENGSNGLSI----RDGSDNGSGTQSSWTKKAAEVDSPQPISPRYQS-ADDSICAQVIHTKPESFSNGWVHLNEPKDGLEHDEQPDGVAMHKGLEMQVSENADLKCDCR-HEXXXXXXXXXXXIKLP------EVDSKPFDNKQLEVDYENICGKRRDQXXXXXXXXXXXXXXXXEIRDFDTPSGPSDISXCQETPCLELTLKRMXGVEDDQXAANEDCNVLRHSHFFWFPKLQYCVFSNQGLLGM*GTVSSK-YTSVAMKT-KQCQISISFDGTLFIGGLWGQHNN 877
            +GS ND+   D+ +   + LS+    RDGSDNGSGTQSSWTK+A E+DSPQ +SP   S   DS CAQVIH   E  SN W+     + G +H E  D  +M K LE+    N+ ++      E             +P      E DS+   N+      + I    R                  ++ D +  +  S I    E    EL LKR+          +++ N+L+ S    F +    V SNQG  G  G+ S +  +S A+KT   C++  + D      G  G  NN
Sbjct:  233 SGSNNDNEDDDDNDEDDDDLSVGHNARDGSDNGSGTQSSWTKRAVEIDSPQQMSPDQPSDLPDSTCAQVIHPTSEICSNRWLPTANKRSGKKHKENNDD-SMGKYLEIGAPRNSSMEYQSSPREMSVNPTEKQHETLMPQSKTTRETDSRNTQNEPTTQTVDLISSIARSTDDKQVVRINNAPDCSSKVPDGNDKNRDSLIDMTSE----ELGLKRLK-TTGSATEIHDERNILKRSDLSAFTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNN 525          
BLAST of EY728861 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.541e-22
Identity = 92/299 (30.77%), Postives = 131/299 (43.81%), Query Frame = 2
Query:   23 NGSENDSSSGDELENGSNGLSI----RDGSDNGSGTQSSWTKKAAEVDSPQPISPRYQS-ADDSICAQVIHTKPESFSNGWVHLNEPKDGLEHDEQPDGVAMHKGLEMQVSENADLKCDCR-HEXXXXXXXXXXXIKLP------EVDSKPFDNKQLEVDYENICGKRRDQXXXXXXXXXXXXXXXXEIRDFDTPSGPSDISXCQETPCLELTLKRMXGVEDDQXAANEDCNVLRHSHFFWFPKLQYCVFSNQGLLGM*GTVSSK-YTSVAMKT-KQCQISISFDGTLFIGGLWGQHNN 877
            +GS ND+   D+ +   + LS+    RDGSDNGSGTQSSWTK+A E+DSPQ +SP   S   DS CAQVIH   E  SN W+     + G +H E  D  +M K LE+    N+ ++      E             +P      E DS+   N+      + I    R                  ++ D +  +  S I    E    EL LKR+          +++ N+L+ S    F +    V SNQG  G  G+ S +  +S A+KT   C++  + D      G  G  NN
Sbjct:  233 SGSNNDNEDDDDNDEDDDDLSVGHNARDGSDNGSGTQSSWTKRAVEIDSPQQMSPDQPSDLPDSTCAQVIHPTSEICSNRWLPTANKRSGKKHKENNDD-SMGKYLEIGAPRNSSMEYQSSPREMSVNPTEKQHETLMPQSKTTRETDSRNTQNEPTTQTVDLISSIARSTDDKQVVRINNAPDCSSKVPDGNDKNRDSLIDMTSE----ELGLKRLK-TTGSATEIHDERNILKRSDLSAFTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNN 525          
BLAST of EY728861 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.174e-21
Identity = 78/244 (31.97%), Postives = 110/244 (45.08%), Query Frame = 2
Query:   14 KKYNGSENDSSSGDELENGSNGLSIRDGSDNGSGTQSSWTKKAAEV-DSPQPISPRYQSADDSICAQVIHTKPESFSNGWVHLNEPKDGLEHDEQPDGVAMHKGLEMQVSENADLKCDCRHEXXXXXXXXXXXIKLPEVDSKPFDNK----QLEVDYENICGKRRDQXXXXXXXXXXXXXXXXEIRDFDTPSGP-----------SDISXCQETPCLELTLKRMXGVEDDQXAANEDCNVLRHS 697
            K    S+ DS S DE ENGS GL+  DGS +GSG QSSWTKKA +V DSP+ +S       DS CAQV+H+ PE  SN  V     K+  EHD++ + V M + LE+ +  N DL  + + E               E  S  +  K     L++  E+   K+  +                 ++D   P  P           + +   +E   +E + KR  G +DD     +D NVLR S
Sbjct:  222 KSIKKSDQDSGSSDENENGSIGLNASDGSSDGSGAQSSWTKKAVDVDDSPRAVS--LWDRVDSTCAQVVHSNPEFPSNQLVAPPAEKETQEHDDKFEDVTMGRDLEISIRRNCDLALEPKDEPLSKTTGIMRQDNSFEKSSSKWKMKVGKGPLDLSSESPSSKQMHE-----DGGSSFKAMSSHLQDNREPEAPNTHLKTLDTNEASVKISEELMHVEHSSKRHRGTKDDGTLVRDDRNVLRRS 458          
BLAST of EY728861 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.180e-19
Identity = 90/280 (32.14%), Postives = 125/280 (44.64%), Query Frame = 2
Query:   14 KKYNGSENDSSSGDELENGSNG----LSIRDGSDNGSGTQ--SSWTKKAAEVDSPQPISPRYQSAD--DSICAQVIHTKPESFSNGWVHLNEPKDGLEHDEQPDGVAMHKGLEMQVSENADLKCDCRHEXXXXXXXXXXXIKLPEVDSKPFDNKQLEVDYENICGKRRDQXXXXXXXXXXXXXXXXEIRDFDTPSGPSDISXCQE------TPCLELTLKRMXGVEDDQXAANED-CNVLRHSHFFWFPKLQYCVFSNQGLLGM*GTVS-SKYTSVAMKT 805
            K  +G E++++SG   ++  +G    L+ RDGSDNGSGTQ  SSWTK+A E+DSPQ +SP  Q AD  DS CAQVIH K +  SN W+     K+  +  E  D     KG ++++    +L    +                   +  P  N   E   EN+  +   +                  R  + P+  S +   ++       P LEL+LKR     DD  A  E+  NVLR S    F +    V SNQG  G  G+ S     S AMKT
Sbjct:  203 KSKSGDESNNNSGSNDDDDDDGVIMGLNARDGSDNGSGTQAQSSWTKRAVEIDSPQAMSPD-QLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQKETNDD---FKGKDLEIGSPRNLNTAYQSSPNERSIK-----PTDRRNEYPLQNNSKEAAMENL-EESSVRAADLIGSMAKNMDAQQAARATNAPNCSSKVPEGKDKNRDNIMPSLELSLKRSRSTGDDANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFVGSCSPHDNISEAMKT 472          
BLAST of EY728861 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.651e-19
Identity = 93/279 (33.33%), Postives = 121/279 (43.37%), Query Frame = 2
Query:   41 SSSGDELEN--GSN----------GLSIRDGSDNGSGTQ--SSWTKKAAEVDSPQPISPRYQSAD--DSICAQVIHTKPESFSNGWVHLNEPKDGLEHDEQPDGVAMHKGLEMQVSENADLKCDCRHEXXXXXXXXXXXIKLPEVDSKPFDNKQLEVDYENICGKRRDQXXXXXXXXXXXXXXXXEIRDFDTPSGPSDISXCQE------TPCLELTLKRMXGVEDDQXAANED-CNVLRHSHFFWFPKLQYCVFSNQGLLGM*GTVS-SKYTSVAMKT 805
            S SGDE  N  GSN          GL+ RDGSDNGSGTQ  SSWTK+A E+DSPQ +SP  Q AD  DS CAQVIH K +  SN W+     K+  +  E  D     KG ++++    +L    +                   +  P  N   E   EN+  +   +                  R  + P+  S +   ++       P LEL+LKR     D   A  E+  NVLR S    F +    V SNQG  G  G+ S    +S AMKT
Sbjct:  204 SKSGDESNNNNGSNDDDDDDGVIMGLNARDGSDNGSGTQAQSSWTKRAVEIDSPQAMSPD-QLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQKETNDD---FKGKDLEIGSPRNLNTAYQSSPNERSIK-----PTDRRNEYPLQNNSKEAAMENL-EESSVRAADLIGSMAKNMDAQQAARAANAPNCSSKVPEGKDKNRDNIMPSLELSLKRSRSTGDGANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFMGSCSLHDNSSEAMKT 472          
The following BLAST results are available for this feature:
BLAST of EY728861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PRR73_ORYSJ2.541e-2230.77Two-component response regulator-like PRR73 OS=Ory... [more]
PRR73_ORYSI2.541e-2230.77Two-component response regulator-like PRR73 OS=Ory... [more]
APRR7_ARATH8.174e-2131.97Two-component response regulator-like APRR7 OS=Ara... [more]
PRR37_ORYSI1.180e-1932.14Two-component response regulator-like PRR37 OS=Ory... [more]
PRR37_ORYSJ7.651e-1933.33Two-component response regulator-like PRR37 OS=Ory... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-E12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728861 ID=EY728861; Name=EY728861; organism=Citrus sinensis; type=EST; length=921bp
CACGCGTCCGGTCAAAAAGTACAACGGCTCTGAAAATGATAGCAGCAGCG
GTGATGAGCTTGAGAATGGGAGTAATGGTCTGAGTATTCGAGATGGAAGT
GACAATGGGAGTGGCACTCAGAGTTCATGGACCAAAAAGGCAGCTGAAGT
CGACAGCCCCCAACCAATATCACCCCGGTATCAATCGGCTGATGATAGCA
TTTGTGCCCAGGTGATTCATACTAAGCCTGAATCATTTAGCAATGGGTGG
GTGCATCTTAATGAACCAAAAGATGGTCTTGAGCACGATGAACAACCTGA
TGGTGTTGCAATGCACAAAGGATTGGAAATGCAAGTATCTGAAAATGCAG
ATTTAAAATGTGATTGTCGACATGAGAAGAAATCTACGCAGCAAACTAGC
AAAAAGAAGATTAAATTGCCGGAAGTAGATAGTAAGCCATTTGATAATAA
GCAACTGGAGGTTGACTATGAAAATATATGTGGCAAACGAAGAGATCAGG
CTACTAGCACATCAAGTGCAAACGCCAATCATGCTAATCCCCATGCTGAA
ATCAGAGATTTTGACACTCCAAGTGGCCCTTCTGATATATCANCTTGTCA
AGAAACACCATGCCTGGAACTAACTTTGAAAAGGATGCANGGAGTGGAAG
ATGATCAAANTGCTGCAAATGAAGATTGCAATGTGTTGAGACATTCACAT
TTTTTTTGGTTCCCCAAATTACAATACTGCGTCTTCAGCAATCAGGGTCT
CCTGGGAATGTAGGGAACTGTCTCCTCTAAATACACCTCTGTGGCCATGA
AGACGAAACAATGCCAAATTTCCATCTCTTTCGATGGCACCCTCTTCATC
GGAGGTCTATGGGGACAGCACAACAACGAATTGGCTCCATGGCTAATATG
TACCCTCACCCCCAAGCTTTA
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