EY728860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728860 vs. ExPASy Swiss-Prot
Match: FUS_MOUSE (RNA-binding protein FUS OS=Mus musculus GN=Fus PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.574e-15 Identity = 68/176 (38.64%), Postives = 81/176 (46.02%), Query Frame = 3 Query: 36 SYSQPPASGYNQQG-QGYAQDSYGGY--HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQ-PSYGVPPTSQSGYGSQVPPQSGYAG----YGMPQAQKPLANPP-AYGQTQQSPGSAGGYGQPG 536 +Y P GY+QQ Q Y Q SY GY A SGYGQ++ Y G GYG + G T YG+ S QSS G GQQP+P++ S G++Q SYG P GYG QSGY G YG Q+ NPP YGQ Q S+GG G G Sbjct: 16 AYPTQPGQGYSQQSSQPYGQQSYSGYGQSADTSGYGQSS-YGSSYGQTQNTGYGTQSAPQGYGSTGGYGSSQSS-------QSSYGQQSSYPGYGQQPAPSSTSGSYGGSSQSSSYGQP--QSGGYGQ----QSGYGGQQQSYGQQQSS---YNPPQGYGQQNQYNSSSGGGGGGG 174
BLAST of EY728860 vs. ExPASy Swiss-Prot
Match: FUS_BOVIN (RNA-binding protein FUS OS=Bos taurus GN=FUS PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.574e-15 Identity = 66/180 (36.67%), Postives = 82/180 (45.56%), Query Frame = 3 Query: 36 SYSQPPASGYNQQG-QGYAQDSYGGY--HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQKPLANPP-AYGQTQQSPGSAGGYGQPGYSHSQPPPS 563 +Y P GY+QQ Q Y Q SYGGY SGYGQ++ Y G GY ++ +G++ S G G S + QSS G GQQP+P+ S G++ S G GYG QSGY G Q+ NPP YGQ Q S GG G G S+ Q PS Sbjct: 16 AYPTQPGQGYSQQSNQPYGQQSYGGYGQSTDTSGYGQSS-YSGSYGQTQNTGYS--TQSAPQGYS-SAGGYGSSQSS----QSSYGQQSSYPGYGQQPAPSGTS-GSYGSSSQSSGYGQPQGGGYGQ----QSGYGGQQQSYGQQQSYNPPQGYGQQSQYNSSGGGGGGGGGSYGQDQPS 182
BLAST of EY728860 vs. ExPASy Swiss-Prot
Match: FUS_HUMAN (RNA-binding protein FUS OS=Homo sapiens GN=FUS PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.274e-14 Identity = 68/186 (36.56%), Postives = 81/186 (43.55%), Query Frame = 3 Query: 36 SYSQPPASGYNQQG-QGYAQDSYGGY--HAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQ-PSYGVPPTSQSGYGSQVPPQSG-YAGYGMPQAQKPLANPPAYGQTQQ----SPGSAGGYGQPGYSHSQPPPSS 566 +Y P GY+QQ Q Y Q SY GY SGYGQ++ Q N+ GYG + G T YG+ S QSS G GQQP+P++ S ++Q SYG P QSG SQ P G YG Q+ P P YGQ Q S G GG G Y Q SS Sbjct: 16 AYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNT--GYGTQSTPQGYGSTGGYGSSQSS-------QSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQP---QSGSYSQQPSYGGQQQSYGQQQSYNP---PQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSS 186
BLAST of EY728860 vs. ExPASy Swiss-Prot
Match: EWS_MOUSE (RNA-binding protein EWS OS=Mus musculus GN=Ewsr1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.128e-13 Identity = 75/215 (34.88%), Postives = 89/215 (41.40%), Query Frame = 3 Query: 18 ADSTGYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAPPPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGM-PQAQKPL----ANPPAYGQTQQSPGSAGGYGQPG-------YSHSQPPPSSYAQPDSGSQRAPPSNYGAA 623 A GYS Y+ P GY Q Q Y Q SYG Y P Y Q Q + A YG + G P+ G ST P S QGYGTG S TA+ TQ SY +QS YG+Q Y YG P A P N PA +T Q S GGY QP YS+ Q P S QP + PP++Y ++ Sbjct: 13 AAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTD-----VSYTQAQ---TTATYGQTAYATSYGQPPT----GYSTPTAPQAYSQPV---QGYGTGAYDS-TTATVT---TTQASYA----AQSAYGTQ----PAYPTYGQQPTATAPTRPQDGNKPA--ETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSS 198
BLAST of EY728860 vs. ExPASy Swiss-Prot
Match: EWS_HUMAN (RNA-binding protein EWS OS=Homo sapiens GN=EWSR1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.128e-13 Identity = 73/234 (31.20%), Postives = 98/234 (41.88%), Query Frame = 3 Query: 18 ADSTGYS-YSQPPASGYNQQGQGYAQDSYGGYHAPQS-GYGQA---APYDQQQGYNSAAGY---GNVNNTSQEGHTPSYGAQG----DSTQAPPPVQSSAAMGQQGYGT-------GQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQA-----QKPLANPPAYGQTQQSPGSAGGYGQPGYS--HSQPPPSSYAQPDSGSQRA-----PPSNYGAAT 626 A GYS Y+ P GY Q Q Y Q SYG Y P Y QA A Y Q Y ++ G G T+ + ++ G D+T A ++ Q YGT GQQP+ TA PQ +P+ P S +G +Q G + Y PQ +P+ PP+Y T S Y Q YS ++ PSSY Q S Q++ PP++Y T Sbjct: 13 AAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG-QTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAA-TAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQT 244
BLAST of EY728860 vs. ExPASy Swiss-Prot
Match: ANXA7_DICDI (Annexin A7 OS=Dictyostelium discoideum GN=nxnA PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.128e-12 Identity = 63/171 (36.84%), Postives = 66/171 (38.60%), Query Frame = 3 Query: 42 SQPPASGYNQQGQGYAQDSYGGYHAPQSGYGQAAPYDQQQGYNSAAGYGNVNNTSQEGHTPSYGAQGDSTQAP----PPVQSSAAMGQQGYGTGQQPSPNTASYPPQGATQPSYGVPPTSQSGYGSQVPPQSGYAGYGMPQAQ-KPLANPPAYGQTQQSPGSAGGYGQPGY 539 S PP GY Q YG APQ GY Y QQGY GY Q+G+ P G P PP Q QQGY QQ P YPPQ P G PP Q GY PPQ GY G P Q P P +PG GY Q GY Sbjct: 2 SYPPNQGYPPQSNSPQPGQYG---APQQGYPPQQGYPPQQGYPPQQGY-----PPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPP--QQGYPP-QQGYPPQQGYPPQQGYPPQQGYPP--QQGY----PPQQGYPPQGYPPQQGYPPVGVPVGVPVGFAPGMVVGYHQ-GY 154 The following BLAST results are available for this feature:
BLAST of EY728860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728860 ID=EY728860; Name=EY728860; organism=Citrus sinensis; type=EST; length=856bpback to top |