EY728855

Overview
NameEY728855
Unique NameEY728855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728855 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.736e-49
Identity = 107/213 (50.23%), Postives = 144/213 (67.61%), Query Frame = 2
Query:  137 EDDEILSVIEDPNGIINEGLVVLDPGKSLTNS---VEIDSGRILAKAIILGESSVEQVPTAEVLITPGSLDAKTCDRSDFKASAVVIQLPAEKNITREVSRSVFEVDCIPLWGSVSIRGRRPXMEDAVAVVPRFMKIPIRMLIGDRVIDGMXPLLNGPTSHFFGVYDGHGXSQAANYCREENHLGLXEEIGILXNNLLMKAQRGFNRGHGKKL 766
            ++D++LSV+ED + +I+EGL+V+D G  L+ S   +EID+GR+LA AII+GESS+EQVPTAEVLI   + D  T        S VVI+LP E +      RSV+E+DCIPLWG+VSI+G R  MEDA AV P F+K+PI+ML+GD   +GM P L   T HFFGVYDGHG  + A+YCR+  H  L EEI  + + L  +     N G G+++
Sbjct:   87 DEDDVLSVVEDNSAVISEGLLVVDAGSELSLSNTAMEIDNGRVLATAIIVGESSIEQVPTAEVLIAGVNQDTNT--------SEVVIRLPDENSNHLVKGRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKR-----NTGEGRQV 284          
BLAST of EY728855 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 3.746e-44
Identity = 104/222 (46.85%), Postives = 140/222 (63.06%), Query Frame = 2
Query:  107 ISSDAVILENEDDEILSVIEDPNGIINEGLVVLDPGK--SLTNSVEIDSGRILAKAIILGESSVEQVPTAEVLITPGSLDAKTCDRSDFKASAVVIQLPAEKNITREVSRSVFEVDCIPLWGSVSIRGRRPXMEDAVAVVPRFMKIPIRMLIGDRVIDGMXPLLNGPTSHFFGVYDGHGXSQAANYCREENHLGLXEEIGILXNNLLMKAQRGFNRGHGKKL 766
            +SSD  +   E +E   ++ D   II+EGL+V+D     SL ++VE D+GR+LA AIIL E+++EQVPTAEVLI   + D       +   S VVI+LP E       SRSV+E++CIPLWG++SI G R  MEDAV  +P F+KIPI+ML+GD   +GM P L   TSHFFGVYDGHG +Q A+YC +  H  L EEI  +   L  +     N G G+++
Sbjct:   74 LSSDFSVTVQESEEDEPLVSDAT-IISEGLIVVDARSEISLPDTVETDNGRVLATAIILNETTIEQVPTAEVLIASLNHDVNM----EVATSEVVIRLPEENPNVARGSRSVYELECIPLWGTISICGGRSEMEDAVRALPHFLKIPIKMLMGDH--EGMSPSLPYLTSHFFGVYDGHGGAQVADYCHDRIHSALAEEIERIKEELCRR-----NTGEGRQV 283          
BLAST of EY728855 vs. ExPASy Swiss-Prot
Match: P2C06_ORYSJ (Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.008e-26
Identity = 59/112 (52.68%), Postives = 72/112 (64.29%), Query Frame = 2
Query:  362 DFKASAVVIQLPAEKNITREVSRSVFEVDCIPLWGSVSIRGRRPXMEDAVAVVPRFMKIPIRMLIGDRVIDGMXPLLNGPTSHFFGVYDGHGXSQAANYCREENHLGLXEEI 697
            D  ASA  ++  A        +RSVF V+C+PLWG  SI GRRP MEDAV  V RF  IP+ ML G+ V+DG+ P+     +HFFGVYDGHG +Q ANYCRE  H  L EE+
Sbjct:  120 DSAASAATVEAEAR---VAAGARSVFAVECVPLWGHKSICGRRPEMEDAVVAVSRFFDIPLWMLTGNSVVDGLDPMSFRLPAHFFGVYDGHGGAQVANYCRERLHAALVEEL 228          
BLAST of EY728855 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.933e-24
Identity = 55/112 (49.11%), Postives = 69/112 (61.61%), Query Frame = 2
Query:  362 DFKASAVVIQLPAEKNITREVSRSVFEVDCIPLWGSVSIRGRRPXMEDAVAVVPRFMKIPIRMLIGDRVIDGMXPLLNGPTSHFFGVYDGHGXSQAANYCREENHLGLXEEI 697
            D  A++V +   AE       +RSVF +DC+PLWG  SI GRRP MED  AVVPRF  +P+ M+ GD  +DG+        +HFF VYDGHG  Q ANYCR+  H  L EE+
Sbjct:   92 DLTAASVAVAEAAEPRAVGATARSVFAMDCVPLWGLESICGRRPEMEDDYAVVPRFFDLPLWMVAGDAAVDGLDRASFRLPAHFFAVYDGHGGVQVANYCRKRIHAVLTEEL 203          
BLAST of EY728855 vs. ExPASy Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.306e-24
Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 2
Query:  401 EKNITREVSRSVFEVDCIPLWGSVSIRGRRPXMEDAVAVVPRFMKIPIRMLIGDRVIDGMXPLLNGPTSHFFGVYDGHGXSQAANYCREENHLGLXEEI 697
            +K ++R  SRS+FE  C+PL+G  SI GRRP MED+V+ +PRF+++    L+  RV +G  P L   ++HFFGVYDGHG SQ ANYCRE  HL L EEI
Sbjct:   93 KKVLSRTESRSLFEFKCVPLYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHL---SAHFFGVYDGHGGSQVANYCRERMHLALTEEI 188          
BLAST of EY728855 vs. ExPASy Swiss-Prot
Match: P2C50_ORYSJ (Probable protein phosphatase 2C 50 OS=Oryza sativa subsp. japonica GN=Os05g0537400 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.872e-19
Identity = 49/100 (49.00%), Postives = 63/100 (63.00%), Query Frame = 2
Query:  428 RSVFEVDCIPLWGSVSIRGRRPXMEDAVAVVPRFMKIPIRMLIGDRVIDGM---XPLLNGPTSHFFGVYDGHGXSQAANYCREENHLGLXEEIGILXNNL 718
            RSV+ +DC P+WG  S RGR   MEDA A VPRF  +P+R+L   R +D +      L  P +H FGV+DGHG ++ ANYCRE  H+ L EE+  L  NL
Sbjct:   50 RSVYLMDCAPVWGCASTRGRSAEMEDASAAVPRFADVPVRLLASRRDLDALGLDADALRLP-AHLFGVFDGHGGAEVANYCRERIHVVLSEELKRLGKNL 148          
BLAST of EY728855 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.445e-19
Identity = 51/99 (51.52%), Postives = 64/99 (64.65%), Query Frame = 2
Query:  401 EKNITREVSRSVFEVDCIPLWGSVSIRGRRPXMEDAVAVVPRFMKIPIRMLIGDRVIDGMXPLLNGPTSHFFGVYDGHGXSQAANYCREENHLGLXEEI 697
            +K I+R  SRS+FE   +PL+G  SI GRRP MEDAV+ +PRF++          ++DG     +   +HFFGVYDGHG SQ ANYCRE  HL L EEI
Sbjct:  109 KKMISRTESRSLFEFKSVPLYGFTSICGRRPEMEDAVSTIPRFLQSS-----SGSMLDGRFDPQSA--AHFFGVYDGHGGSQVANYCRERMHLALAEEI 200          
The following BLAST results are available for this feature:
BLAST of EY728855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
P2C16_ARATH1.736e-4950.23Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]
P2C07_ARATH3.746e-4446.85Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
P2C06_ORYSJ6.008e-2652.68Probable protein phosphatase 2C 6 OS=Oryza sativa ... [more]
P2C53_ORYSJ1.933e-2449.11Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]
P2C77_ARATH4.306e-2454.55Protein phosphatase 2C 77 OS=Arabidopsis thaliana ... [more]
P2C50_ORYSJ1.872e-1949.00Probable protein phosphatase 2C 50 OS=Oryza sativa... [more]
P2C56_ARATH2.445e-1951.52Protein phosphatase 2C 56 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-E03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728855 ID=EY728855; Name=EY728855; organism=Citrus sinensis; type=EST; length=874bp
CACGCGTCCGAATGAAGTTAACCGGGTGATTTTGTCGGCAGCAGAAGGAA
ATGGTGGTCAAGGAGTTGGTTTGCTGAAAATCTTTCCTGAGAGTGGTAGC
AGTATTATTTCCAGTGATGCTGTGATTCTGGAAAATGAGGACGATGAAAT
TCTTTCTGTTATTGAGGACCCAAACGGGATTATCAATGAGGGTTTGGTAG
TTTTGGATCCAGGGAAAAGCTTGACAAATTCTGTGGAAATTGATAGTGGT
CGAATTCTTGCTAAGGCTATTATTTTAGGAGAGTCAAGTGTTGAGCAGGT
GCCTACAGCTGAAGTCCTTATTACTCCAGGGAGCCTGGATGCAAAGACTT
GTGATAGATCTGATTTTAAGGCCTCTGCAGTGGTAATTCAGTTGCCTGCT
GAGAAAAATATCACTAGAGAGGTTAGCCGGAGTGTCTTCGAGGTGGACTG
TATACCCCTTTGGGGTTCTGTGTCTATACGCGGAAGAAGACCANAAATGG
AGGATGCTGTTGCTGTAGTACCTCGTTTCATGAAAATTCCTATCAGAATG
CTTATTGGTGATCGTGTNATTGATGGAATGANNCCACTGTTGAATGGCCC
TACCAGTCACTTTTTTGGTGTTTATGATGGGCATGGANGTTCTCAGGCTG
CTAACTATTGTCGTGAGGAGAATCATTTGGGCTTANCTGAGGAGATTGGA
ATCCTCANGAACAATTTACTGATGAAAGCCCAAAGGGGATTCAACAGGGG
ACATGGGAAAAAACTTCCCCATTTGTTTCCTTAAGGTTGAGATTAAATTG
GGGGGAAAACCGGTAAAATGTTATAGCGGGTGATGGAAATTCTCTNAATC
CTTTTGAGGGTTGTGGCCCGAAAT
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