EY728852

Overview
NameEY728852
Unique NameEY728852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728852 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.449e-16
Identity = 53/132 (40.15%), Postives = 70/132 (53.03%), Query Frame = 3
Query:   27 GSENDSTSGDELENGSNGLSIP----DGSDNGSGTQSSWTKKAAEIHSPQPISPRYQS-ADDSLCAQVIHTKPESFTHGWVPLAEPQDGLDQDEQPDGVAMHTGLEMQVSENADLKCDCQHDNKSTQRTSKK 407
            GS ND+   D+ +   + LS+     DGSDNGSGTQSSWTK+A EI SPQ +SP   S   DS CAQVIH   E  ++ W+P A  + G    E  D  +M   LE+    N+ ++        S   T K+
Sbjct:  234 GSNNDNEDDDDNDEDDDDLSVGHNARDGSDNGSGTQSSWTKRAVEIDSPQQMSPDQPSDLPDSTCAQVIHPTSEICSNRWLPTANKRSGKKHKENNDD-SMGKYLEIGAPRNSSMEYQSSPREMSVNPTEKQ 364          
BLAST of EY728852 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.449e-16
Identity = 53/132 (40.15%), Postives = 70/132 (53.03%), Query Frame = 3
Query:   27 GSENDSTSGDELENGSNGLSIP----DGSDNGSGTQSSWTKKAAEIHSPQPISPRYQS-ADDSLCAQVIHTKPESFTHGWVPLAEPQDGLDQDEQPDGVAMHTGLEMQVSENADLKCDCQHDNKSTQRTSKK 407
            GS ND+   D+ +   + LS+     DGSDNGSGTQSSWTK+A EI SPQ +SP   S   DS CAQVIH   E  ++ W+P A  + G    E  D  +M   LE+    N+ ++        S   T K+
Sbjct:  234 GSNNDNEDDDDNDEDDDDLSVGHNARDGSDNGSGTQSSWTKRAVEIDSPQQMSPDQPSDLPDSTCAQVIHPTSEICSNRWLPTANKRSGKKHKENNDD-SMGKYLEIGAPRNSSMEYQSSPREMSVNPTEKQ 364          
BLAST of EY728852 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.227e-15
Identity = 54/152 (35.53%), Postives = 83/152 (54.61%), Query Frame = 3
Query:    3 TRPVKK*HGSENDSTSGDELENGSNGLSIPDGSDNGSGTQSSWTKKAAEI-HSPQPISPRYQSADDSLCAQVIHTKPESFTHGWVPLAEPQDGLDQDEQPDGVAMHTGLEMQVSENADLKCD------------CQHDNKSTQRTSKKKIRL 419
            ++ +KK   S+ DS S DE ENGS GL+  DGS +GSG QSSWTKKA ++  SP+ +S       DS CAQV+H+ PE  ++  V     ++  + D++ + V M   LE+ +  N DL  +             + DN   + +SK K+++
Sbjct:  221 SKSIKK---SDQDSGSSDENENGSIGLNASDGSSDGSGAQSSWTKKAVDVDDSPRAVS--LWDRVDSTCAQVVHSNPEFPSNQLVAPPAEKETQEHDDKFEDVTMGRDLEISIRRNCDLALEPKDEPLSKTTGIMRQDNSFEKSSSKWKMKV 367          
BLAST of EY728852 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.022e-14
Identity = 62/162 (38.27%), Postives = 82/162 (50.62%), Query Frame = 3
Query:   42 STSGDELEN--GSN----------GLSIPDGSDNGSGTQ--SSWTKKAAEIHSPQPISPRYQSAD--DSLCAQVIHTKPESFTHGWVPLAEPQDGLDQDEQPDGVAMHTGLEMQVSENADLKCDCQHDNKSTQRTSKKKIRLPEVHSTPFDNKHLEVDKENI 479
            S SGDE  N  GSN          GL+  DGSDNGSGTQ  SSWTK+A EI SPQ +SP  Q AD  DS CAQVIH K +  ++ W+P    ++   Q E  D      G ++++    +L  +  + +   +R+ K   R  E    P  N   E   EN+
Sbjct:  204 SKSGDESNNNNGSNDDDDDDGVIMGLNARDGSDNGSGTQAQSSWTKRAVEIDSPQAMSPD-QLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQKETNDD---FKGKDLEIGSPRNL--NTAYQSSPNERSIKPTDRRNEY---PLQNNSKEAAMENL 356          
BLAST of EY728852 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.022e-14
Identity = 62/162 (38.27%), Postives = 82/162 (50.62%), Query Frame = 3
Query:   42 STSGDELEN--GSN----------GLSIPDGSDNGSGTQ--SSWTKKAAEIHSPQPISPRYQSAD--DSLCAQVIHTKPESFTHGWVPLAEPQDGLDQDEQPDGVAMHTGLEMQVSENADLKCDCQHDNKSTQRTSKKKIRLPEVHSTPFDNKHLEVDKENI 479
            S SGDE  N  GSN          GL+  DGSDNGSGTQ  SSWTK+A EI SPQ +SP  Q AD  DS CAQVIH K +  ++ W+P    ++   Q E  D      G ++++    +L  +  + +   +R+ K   R  E    P  N   E   EN+
Sbjct:  204 SKSGDESNNNSGSNDDDDDDGVIMGLNARDGSDNGSGTQAQSSWTKRAVEIDSPQAMSPD-QLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQKETNDD---FKGKDLEIGSPRNL--NTAYQSSPNERSIKPTDRRNEY---PLQNNSKEAAMENL 356          
The following BLAST results are available for this feature:
BLAST of EY728852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PRR73_ORYSJ1.449e-1640.15Two-component response regulator-like PRR73 OS=Ory... [more]
PRR73_ORYSI1.449e-1640.15Two-component response regulator-like PRR73 OS=Ory... [more]
APRR7_ARATH1.227e-1535.53Two-component response regulator-like APRR7 OS=Ara... [more]
PRR37_ORYSJ3.022e-1438.27Two-component response regulator-like PRR37 OS=Ory... [more]
PRR37_ORYSI3.022e-1438.27Two-component response regulator-like PRR37 OS=Ory... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-D12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728852 ID=EY728852; Name=EY728852; organism=Citrus sinensis; type=EST; length=863bp
CCACGCGTCCGGTCAAAAAGTAACACGGCTCTGAAAATGATAGCACCAGC
GGTGATGAGCTTGAGAATGGGAGTAATGGTCTGAGTATTCCAGATGGAAG
TGACAATGGGAGTGGCACTCAGAGTTCATGGACCAAAAAGGCAGCTGAAA
TCCACAGCCCCCAACCAATATCACCCCGGTATCAATCGGCTGATGATAGC
CTTTGTGCCCAAGTGATTCATACTAAGCCTGAATCCTTTACCCATGGGTG
GGTGCCTCTTGCTGAACCCCAAGATGGTCTTGACCAGGATGAACAACCTG
ATGGTGTTGCGATGCACACAGGATTGGAAATGCAAGTATCTGAAAATGCA
GATTTAAAATGTGATTGTCAACATGACAATAAATCTACGCAGCGAACTAG
CAAAAAGAAGATTAGATTGCCGGAAGTACATAGTACGCCATTTGATAATA
AGCACCTGGAGGTTGACAAGGAAAATATATGTGGCAAACGAAGAGATCAG
GCTACTAGCACATCATCTGCAAACGCCAATCATGCTAATCCCCATGCTGA
AATCATAGATTATGACACTCCAACTAGCCCTCCTGATATATCACTTGGTC
GAGACACACCTTGCCCGGACCTAGCTTTGAAAGGATGCACAGAATGGAAT
ATGATCACAGTGCCGAGAGAGTGGGTTGCGGGTGTGGGAAACATGGGATC
TGCGCGAGCCTCGCGACACACAGACCGGCGTCTCCCCCAATCCGGGCCAC
CCAGGGGAAGTGCGAAGCCGGGTTGCCGCGTGAGTAGGCCCACTGGCGAG
TAGACGAGCGGACGCTCGCCGGGGAGCGCGGCGCTGATCGAGGTCCCGCC
TCCATAGGCGTAC
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