EY728844

Overview
NameEY728844
Unique NameEY728844
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728844 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.235e-20
Identity = 38/72 (52.78%), Postives = 47/72 (65.28%), Query Frame = 3
Query:  207 YQRPTMYPPPGAYGKYSYAAYREPLICALSTDLSIVPSIASAI*VHPPPDKRFASFAIHFLMGGVSVAASKS 422
            ++ P +Y    AYG YS AA + P+      DLS+VPS ASAI V  P +K F+SFAI FLMGGVS A SK+
Sbjct:   33 FRSPALYQRRAAYGNYSNAALQHPV--RAFGDLSMVPSTASAICVQAPAEKGFSSFAIDFLMGGVSAAVSKT 102          

HSP 2 Score: 34.6538 bits (78), Expect = 1.235e-20
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 1
Query:  439 ERAFLSLHYQD*MVYIGGLSDPYSGVGDC 525
            ER  L +  QD M+  G LS+PY G+GDC
Sbjct:  108 ERVKLLIQNQDEMIKSGRLSEPYKGIGDC 136          

HSP 3 Score: 31.187 bits (69), Expect = 1.235e-20
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 3
Query:  600 FRAHVLSFVF*DWSSRLFNILRYRDGNWR 686
            F    L+F F D+  RLFN  + RDG W+
Sbjct:  161 FPTQALNFAFKDYFKRLFNFKKDRDGYWK 189          

HSP 4 Score: 24.2534 bits (51), Expect = 1.235e-20
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 2
Query:  533 RSKKDYGIVAMLRRNSANVIL*FP 604
            R+ KD G  ++ R N+ANVI  FP
Sbjct:  139 RTIKDEGFGSLWRGNTANVIRYFP 162          
BLAST of EY728844 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 2.054e-17
Identity = 31/72 (43.06%), Postives = 42/72 (58.33%), Query Frame = 3
Query:  207 YQRPTMYPPPGAYGKYSYAAYREPLICALSTDLSIVPSIASAI*VHPPPDKRFASFAIHFLMGGVSVAASKS 422
            YQRP+MY     YG YS AA++ P    +      + + AS + V  P +K F +FA+ FLMGGVS A SK+
Sbjct:   31 YQRPSMYQRHATYGNYSNAAFQFPPTSRM------LATTASPVFVQTPGEKGFTNFALDFLMGGVSAAVSKT 96          

HSP 2 Score: 35.039 bits (79), Expect = 2.054e-17
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 1
Query:  439 ERAFLSLHYQD*MVYIGGLSDPYSGVGDC 525
            ER  L +  QD M+  G LS+PY G+GDC
Sbjct:  102 ERVKLLIQNQDEMIKAGRLSEPYKGIGDC 130          

HSP 3 Score: 31.187 bits (69), Expect = 2.054e-17
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 3
Query:  600 FRAHVLSFVF*DWSSRLFNILRYRDGNWR 686
            F    L+F F D+  RLFN  + RDG W+
Sbjct:  155 FPTQALNFAFKDYFKRLFNFKKDRDGYWK 183          

HSP 4 Score: 24.2534 bits (51), Expect = 2.054e-17
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 2
Query:  533 RSKKDYGIVAMLRRNSANVIL*FP 604
            R+ KD G  ++ R N+ANVI  FP
Sbjct:  133 RTIKDEGFGSLWRGNTANVIRYFP 156          
BLAST of EY728844 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 2.008e-15
Identity = 31/70 (44.29%), Postives = 41/70 (58.57%), Query Frame = 3
Query:  213 RPTMYPPPGAYGKYSYAAYREPLICALSTDLSIVPSIASAI*VHPPPDKRFASFAIHFLMGGVSVAASKS 422
            +P +Y    AYG YS A  +       + DLS++ S AS + V  P +K FA+FA  FLMGGVS A SK+
Sbjct:   36 QPAIYQRHFAYGNYSNAGLQRG---QATQDLSLITSNASPVFVQAPQEKGFAAFATDFLMGGVSAAVSKT 102          

HSP 2 Score: 32.7278 bits (73), Expect = 2.008e-15
Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 1
Query:  439 ERAFLSLHYQD*MVYIGGLSDPYSGVGDC 525
            ER  L +  QD M+  G LS+PY G+G+C
Sbjct:  108 ERVKLLIQNQDEMLKAGRLSEPYKGIGEC 136          

HSP 3 Score: 31.187 bits (69), Expect = 2.008e-15
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 3
Query:  600 FRAHVLSFVF*DWSSRLFNILRYRDGNWR 686
            F    L+F F D+  RLFN  + RDG W+
Sbjct:  161 FPTQALNFAFKDYFKRLFNFKKDRDGYWK 189          

HSP 4 Score: 22.7126 bits (47), Expect = 2.008e-15
Identity = 11/24 (45.83%), Postives = 16/24 (66.67%), Query Frame = 2
Query:  533 RSKKDYGIVAMLRRNSANVIL*FP 604
            R+ K+ G  ++ R N+ANVI  FP
Sbjct:  139 RTIKEEGFGSLWRGNTANVIRYFP 162          
BLAST of EY728844 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 1.666e-13
Identity = 30/71 (42.25%), Postives = 40/71 (56.34%), Query Frame = 3
Query:  210 QRPTMYPPPGAYGKYSYAAYREPLICALSTDLSIVPSIASAI*VHPPPDKRFASFAIHFLMGGVSVAASKS 422
            QRP +      YG YS A  +    C  + DLS++ + AS + V  P +K  A+FA  FLMGGVS A SK+
Sbjct:   34 QRPALSQRRFPYGNYSNAGLQT---CQATQDLSLIAANASPVFVQAPQEKGLAAFATDFLMGGVSAAVSKT 101          

HSP 2 Score: 35.039 bits (79), Expect = 1.666e-13
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 1
Query:  439 ERAFLSLHYQD*MVYIGGLSDPYSGVGDC 525
            ER  L +  QD M+  G LS+PY G+GDC
Sbjct:  107 ERVKLLIQNQDEMIKAGRLSEPYKGIGDC 135          

HSP 3 Score: 26.9498 bits (58), Expect = 1.666e-13
Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 2
Query:  530 TRSKKDYGIVAMLRRNSANVIL*FP 604
            +R+ KD G  A+ R N+ANVI  FP
Sbjct:  137 SRTIKDEGFAALWRGNTANVIRYFP 161          
BLAST of EY728844 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 57.7658 bits (138), Expect = 6.020e-13
Identity = 31/71 (43.66%), Postives = 42/71 (59.15%), Query Frame = 3
Query:  210 QRPTMYPPPGAYGKYSYAAYREPLICALSTDLSIVPSIASAI*VHPPPDKRFASFAIHFLMGGVSVAASKS 422
            +RP  Y    AYG YS AA++ PL+ A     S + +  S + V  P +K F +FAI F+MGGVS A SK+
Sbjct:   35 KRPATYQKHAAYGNYSNAAFQYPLVAA-----SQIATTTSPVFVQAPGEKGFTNFAIDFMMGGVSAAVSKT 100          

HSP 2 Score: 30.0314 bits (66), Expect = 6.020e-13
Identity = 13/29 (44.83%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  439 ERAFLSLHYQD*MVYIGGLSDPYSGVGDC 525
            ER  L +  QD M+  G L++PY G+ DC
Sbjct:  106 ERVKLLIQNQDEMLKAGRLTEPYKGIRDC 134          

HSP 3 Score: 24.6386 bits (52), Expect = 6.020e-13
Identity = 12/24 (50.00%), Postives = 17/24 (70.83%), Query Frame = 2
Query:  533 RSKKDYGIVAMLRRNSANVIL*FP 604
            R+ +D GI ++ R N+ANVI  FP
Sbjct:  137 RTIRDEGIGSLWRGNTANVIRYFP 160          
The following BLAST results are available for this feature:
BLAST of EY728844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ADT1_GOSHI1.235e-2052.78ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT1_ARATH2.054e-1743.06ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT1_SOLTU2.008e-1544.29ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT2_SOLTU1.666e-1342.25ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT2_ARATH6.020e-1343.66ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728844 ID=EY728844; Name=EY728844; organism=Citrus sinensis; type=EST; length=782bp
CACGCGTCCGAACTACAGTAAGCAAAATATCTCTGTTTATGTCCCTTTAC
GAAATCCTTTCCTATCTACTCATATCGGGAGGAGGGTCCCAATCTGTCAT
TTGTAACGAACTATCTCAATGATCGAATACGTTCTACCTCCTCCCGTCAT
GCATAAGGTAGCTGGACCACTCTTCTCATTCCATCCTTTCCCACAATATT
CAAGAATATCAAAGGCCAACCATGTATCCTCCACCTGGTGCTTATGGGAA
ATACTCCTATGCTGCGTACCGGGAACCCTTAATCTGTGCACTTTCTACCG
ATCTATCAATCGTGCCGTCAATTGCGTCTGCTATATGAGTCCACCCCCCA
CCTGACAAAAGATTTGCCAGCTTTGCTATCCACTTCCTTATGGGTGGAGT
TTCTGTCGCTGCGTCCAAAAGCACTTGCTGATCTCCCTGAGCGGGCTTTT
CTTTCGCTTCATTACCAAGATTAAATGGTCTATATTGGTGGGCTATCTGA
CCCCTACTCAGGCGTCGGTGATTGTTCTCACTCGTTCAAAGAAAGATTAC
GGTATTGTTGCTATGTTGAGACGCAATAGTGCTAATGTTATCCTGTGATT
TCCGCGCCCATGTCCTGAGCTTTGTCTTCTAGGATTGGTCCAGCAGGCTC
TTCAACATCTTGAGATACAGGGATGGTAACTGGAGACTGGTTCCTCGTTA
TTTGGTGATCAGATGGTGTGCCGTTCCCCGAACCCCCCACCTGCTTCCAC
TTGGATTAGCCAGCCCCGCCGCGGGCTGGGCC
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