EY728840

Overview
NameEY728840
Unique NameEY728840
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9149 contig Csv1_Contig9149:1..612. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of EY728840 vs. ExPASy Swiss-Prot
Match: ALDH_VIBHA (NADP-dependent fatty aldehyde dehydrogenase OS=Vibrio harveyi GN=aldH PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.495e-31
Identity = 81/192 (42.19%), Postives = 101/192 (52.60%), Query Frame = 3
Query:   36 YRSLSAQHRASFLEAIADELDVLGDDFIALVCRETALPAGRIQGERGRTSGQMRLFAKVLRRGDFYGARIXXXXXXXXXXXXXXXXXXXIGLGPVAVFGASNFPLAFSXXXXXXXXXXXXXCPVVFKAHSGHMATAERVAEAIMRAAQSTGMPD--XXXXXXXXXXXXEALVXHPAIRAVGFTGSLKGGRAL 605
            +R L+   RAS L  IA EL+   DD IA    ETALP  R+ GE  RT+ Q+RLFA V+  G ++ A +                   I LGPVAVFGASNFPLAFS             CPV+ K H+ H  T++ VAE I +A +   +P               +ALV HP I+AVGFTGS+ GGRAL
Sbjct:   46 FRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRAL 237          
The following BLAST results are available for this feature:
BLAST of EY728840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ALDH_VIBHA1.495e-3142.19NADP-dependent fatty aldehyde dehydrogenase OS=Vib... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728840 ID=EY728840; Name=EY728840; organism=Citrus sinensis; type=EST; length=612bp
CGGCAGCCAACGCCGCAGCAGCGGCTTACCCGGTTTATCGCAGCCTGAGC
GCGCAGCATCGTGCGTCGTTCCTGGAGGCGATAGCCGATGAGCTGGACGT
CCTTGGTGATGACTTTATCGCCTTGGTCTGCCGCGAAACGGCGTTGCCCG
CCGGGCGTATCCAGGGCGAACGCGGCCGTACCAGCGGCCAGATGCGGCTG
TTCGCCAAGGTGCTGCGGCGCGGTGATTTCTACGGGGCGCGGATCGATCT
GGCGCTGCCGGATCGCCAGCCTTTGCCACGCCCGGATTTGCGCCAGTACC
GCATCGGTCTCGGCCCGGTCGCCGTGTTTGGGGCGAGTAATTTTCCCTTG
GCCTTTTCCACTGCCGGTGGCGACACCGCCGCCGCGCTGGCGGCCGGCTG
CCCGGTGGTGTTCAAGGCCCACAGCGGCCATATGGCCACTGCCGAGCGGG
TCGCCGAAGCGATCATGCGGGCGGCGCAGAGCACCGGCATGCCCGACGGC
GTGTTCAATGTGATCTTCGGCGGGNGGGTGGGTGAAGCACTGGTCNAGCA
CCCGGCNATCCGCGCCGTGGGTTTCACCGGCTCGCTCAAGGGTGGCCGGG
CCCTGTGTGATA
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