EY728834

Overview
NameEY728834
Unique NameEY728834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_ARATH (Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.507e-50
Identity = 105/165 (63.64%), Postives = 128/165 (77.58%), Query Frame = 2
Query:  149 TAIQTPQPAVSDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            +A +   PA ++ +      FN+LI+ LI RVDL+E EA++SL++LLNEA+EALISAFLVLLRAKGET+ EIVGLA AM+K+A  VEGL DA+DIVGTGGDGANTVNISTG+SILAAACGAKVAKQ            DVLE LGVV+D  P G++RCV+E G+G
Sbjct:   88 SAAEALPPACANASPSSIKSFNQLIETLIDRVDLSETEAESSLEFLLNEANEALISAFLVLLRAKGETYEEIVGLARAMMKHARKVEGLVDAVDIVGTGGDGANTVNISTGSSILAAACGAKVAKQGNRSSSSACGSADVLEALGVVLDLGPEGIKRCVEEGGIG 252          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_ACIC1 (Anthranilate phosphoribosyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.123e-29
Identity = 73/149 (48.99%), Postives = 100/149 (67.11%), Query Frame = 2
Query:  200 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            TP + E++  L++R DLTEAEA  ++  +++ EA +A I+AF V LRAKGE+  E+ GL++ M+  A  V  +G+ALDIVG+GGD A+TVNIST A+I+AAA G  VAK             D+LE LGV ID D  GV RC++ AG+G
Sbjct:    5 TPSWPEVLSALLARRDLTEAEAAWAMHQIMSGEATDAQIAAFAVALRAKGESAEEVSGLSSVMLALAAPVPPIGEALDIVGSGGDRAHTVNISTMAAIVAAATGVVVAKHGNRAASSACGSADLLEALGVAIDLDGAGVARCIERAGIG 153          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_CHLFF (Anthranilate phosphoribosyltransferase OS=Chlamydophila felis (strain Fe/C-56) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.329e-25
Identity = 62/141 (43.97%), Postives = 90/141 (63.83%), Query Frame = 2
Query:  221 IDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            +  ++++  LT  EA++  + +LN +D   I+AFL +L+ +GET  EI G+ +A+ K AT+V+    ALDIVGTGGD ANTVNISTG++IL+AACG  +AK             DVLE LG+ I+  P  +  C+ E G+G
Sbjct:    6 LQSIMNQSHLTYDEAESVTNLMLNGSDPHQIAAFLAVLKYRGETPTEIAGMVSALQKQATSVDLPFPALDIVGTGGDLANTVNISTGSAILSAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMTPEELLSCIQEVGIG 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_CHLCV (Anthranilate phosphoribosyltransferase OS=Chlamydophila caviae GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.856e-24
Identity = 63/141 (44.68%), Postives = 87/141 (61.70%), Query Frame = 2
Query:  221 IDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            +  ++++  LT  E ++  + +LN AD   I+AFL +L+ +GET  E+ G+ +A+ K AT V     ALDIVGTGGD ANTVNISTG++ILAAACG  +AK             DVLE LG+ I+  P  +  CV E G+G
Sbjct:    6 LQSIMNQSHLTYDEVESVTNLMLNGADPHQIAAFLAVLKYRGETPTEVAGMISALQKQATPVNLPFPALDIVGTGGDLANTVNISTGSAILAAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMSPEELLSCVQEVGIG 146          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAD (Anthranilate phosphoribosyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.165e-24
Identity = 66/144 (45.83%), Postives = 87/144 (60.42%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            E I  +++R DLT+AEA + ++ ++N  A  A I+AFL  L  KGET  EI G+A  M + AT+V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+ D  GV RC+ +AG+G
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMNGTATPAQIAAFLTALHIKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLRDAGIG 148          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_SACEN (Anthranilate phosphoribosyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.399e-24
Identity = 64/143 (44.76%), Postives = 89/143 (62.24%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            L+  L++  DL+  +   ++D ++  EA  A ++AF+V LRAKGET  E+ G+A AM+ ++  +E    A+DIVGTGGD + +VNIST ASI+ AA G  V K             DVLE LGV ID  P GVRRCV++ G+G
Sbjct:   11 LLGHLVAGNDLSAEDTAWAMDLVMTGEATPARVAAFVVALRAKGETPAEVRGMADAMLSHSRPLEIRRRAVDIVGTGGDRSGSVNISTMASIVVAAAGVPVVKHGNRAASSKCGTADVLEALGVAIDLPPEGVRRCVEDLGIG 153          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_CHLSY (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.051e-24
Identity = 66/144 (45.83%), Postives = 86/144 (59.72%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            E I  +++R DLT+AEA + ++ +++  A  A I AFL  L  KGET  EI G+A  M + AT+V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+ D  GV RC+ EAG+G
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMSGTATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLREAGIG 148          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAA (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.051e-24
Identity = 66/144 (45.83%), Postives = 86/144 (59.72%), Query Frame = 2
Query:  215 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMG 643
            E I  +++R DLT+AEA + ++ +++  A  A I AFL  L  KGET  EI G+A  M + AT+V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+ D  GV RC+ EAG+G
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMSGTATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLREAGIG 148          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_ARTS2 (Anthranilate phosphoribosyltransferase OS=Arthrobacter sp. (strain FB24) GN=trpD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.679e-23
Identity = 67/153 (43.79%), Postives = 90/153 (58.82%), Query Frame = 2
Query:  218 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCARRITRP 673
            LI  LI+  DLT    + ++D +++ EA  + I+ FLV LR+KGET  EI GL  AM+ +A  V+  G+ LDIVGTGGD  NTVNIST A+++ A  GAKV K             DVLE LGV +D     V R  +EAG+ + C  ++  P
Sbjct:   17 LISALINGADLTADNTEWAMDTIMSGEATPSQIAGFLVALRSKGETVDEIAGLVEAMLAHANPVDIAGEKLDIVGTGGDQLNTVNISTMAALVCAGAGAKVVKHGNRASSSSSGSADVLEALGVRLDLPIERVARNAEEAGI-TFCFAQVFHP 168          
BLAST of EY728834 vs. ExPASy Swiss-Prot
Match: TRPD_BEII9 (Anthranilate phosphoribosyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=trpD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.796e-23
Identity = 73/197 (37.06%), Postives = 93/197 (47.21%), Query Frame = 2
Query:  209 FNELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLATAMIKYATNVEGLGDALDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLETLGVVIDWDPHGVRRCVDEAGMGSGCAR--RITRPEVGGARQHKLRGTTYAPSGVVCGTAL*ARPGRGASDRHW 790
            F   I  L +   LT AEA+A+ D +   E   A +  FL+ +R +GET  EI+G  TAM      V+   DA+DIVGTGGDG  T N+ST AS++ AACG  VAK             DVL  LGV    D  GV  C+  AG+G   A+        V  AR      T +   G +C  A   R   G   + W
Sbjct:    4 FKPFIAKLATGSSLTRAEAEAAFDQIFAGEVTPAQLGGFLMAMRVRGETVDEIIGAVTAMRARMVRVDAPTDAIDIVGTGGDGHGTFNVSTLASLIVAACGVPVAKHGNRAASSRSGASDVLSALGVRTGLDSAGVEACIRGAGIGFMMAQTHHTAMRHVASARVELGTRTIFNLLGPLCNPAGVTRQLLGVFSQAW 200          
The following BLAST results are available for this feature:
BLAST of EY728834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
TRPD_ARATH1.507e-5063.64Anthranilate phosphoribosyltransferase, chloroplas... [more]
TRPD_ACIC11.123e-2948.99Anthranilate phosphoribosyltransferase OS=Acidothe... [more]
TRPD_CHLFF8.329e-2543.97Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_CHLCV1.856e-2444.68Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_CHLAD3.165e-2445.83Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_SACEN5.399e-2444.76Anthranilate phosphoribosyltransferase OS=Saccharo... [more]
TRPD_CHLSY7.051e-2445.83Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_CHLAA7.051e-2445.83Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_ARTS22.679e-2343.79Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD_BEII97.796e-2337.06Anthranilate phosphoribosyltransferase OS=Beijerin... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728834 ID=EY728834; Name=EY728834; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGTGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTC
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCACCGCGATGATAAAGTATGCTACC
AACGTGGAAGGGCTGGGTGATGCACTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAACTTTGGGTGTCGTTATTGACTGGGA
CCCCCACGGTGTGAGAAGGTGTGTGGATGAGGCAGGAATGGGTTCTGGAT
GTGCACGAAGGATCACCCGGCCTGAAGTTGGTGGCGCACGGCAGCACAAA
CTCCGAGGAACCACGTATGCCCCTTCTGGCGTCGTCTGTGGAACGGCGCT
GTGAGCCAGGCCCGGGCGGGGGGCGTCCGATAGACATTGGAAGCTCACAG
GCGAGTTGACTGGAGCGGTGGGGCGGGGAGAGCGGGGGGGCCACGTCGTG
GGT
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