EY728832

Overview
NameEY728832
Unique NameEY728832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 2.477e-52
Identity = 85/120 (70.83%), Postives = 102/120 (85.00%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFCSS +M +TL++Y++CSYG+++ N++ AKE + SY EY+KLK ++E LQ  QR   G   G L
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120          

HSP 2 Score: 53.5286 bits (127), Expect = 2.477e-52
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEMLL 749
            KELEQLERQL  SL +VRS+K +  LD+LS+LQ KE+MLL
Sbjct:  123 KELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLL 162          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.585e-51
Identity = 85/120 (70.83%), Postives = 102/120 (85.00%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALI+FS+RGKLYEFCS+  M++TLE+Y+RCSYG+L+ + Q +KET++SY+EY+KLK K + LQ   R   G   G L
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQRCSYGSLETS-QPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGEL 119          

HSP 2 Score: 53.5286 bits (127), Expect = 1.585e-51
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEMLLGSPYI*V*SWEE*C-SRNPSWQ*EQ 821
            KELEQLE QL  SL ++RS+K ++ LD+L++LQ KEEML  S        EE C S  P+W   Q
Sbjct:  122 KELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLEESCASFRPNWDVRQ 186          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.692e-51
Identity = 83/120 (69.17%), Postives = 102/120 (85.00%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FS+RGKLYEFCS+ +M +TLE+Y++CSYG+++ N++ AKE + SY EY+KLK ++E LQ  QR   G   G L
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120          

HSP 2 Score: 51.6026 bits (122), Expect = 2.692e-51
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEMLL 749
            KELEQLERQL  SL +VR +K +  LD+LS+LQGKE +LL
Sbjct:  123 KELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILL 162          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.296e-47
Identity = 84/115 (73.04%), Postives = 97/115 (84.35%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPS-MHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWG 603
            MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+AL+IFS+RGKLYEFCSSPS M +T++KY + SY T+  N QSAK+ Q  Y++Y+KLK + E LQH QR   G
Sbjct:    1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMDPN-QSAKDLQDKYQDYLKLKSRVEILQHSQRHLLG 114          

HSP 2 Score: 48.1358 bits (113), Expect = 1.296e-47
Identity = 24/39 (61.54%), Postives = 32/39 (82.05%), Query Frame = 3
Query:  633 ELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEMLL 749
            ELE LERQ+ +SL ++RS K R+ LD+LS+L+ KEEMLL
Sbjct:  124 ELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLL 162          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 3.741e-47
Identity = 84/123 (68.29%), Postives = 99/123 (80.49%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQ---ASYEEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFCSS SM +TLE+Y++C+YG  + N  S +      +S +EY+KLKE+++ALQ  QR   G   G L
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPL 123          

HSP 2 Score: 47.3654 bits (111), Expect = 3.741e-47
Identity = 23/39 (58.97%), Postives = 31/39 (79.49%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            KELE LERQL SSL ++R+L+ +  LD+L++LQ KE ML
Sbjct:  126 KELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERML 164          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 8.281e-47
Identity = 84/123 (68.29%), Postives = 99/123 (80.49%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQ---ASYEEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFCSS SM +TLE+Y++C+YG  + N  S +      +S +EY+KLKE+++ALQ  QR   G   G L
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPL 123          

HSP 2 Score: 46.595 bits (109), Expect = 8.281e-47
Identity = 23/39 (58.97%), Postives = 31/39 (79.49%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            KELE LERQL SSL ++R+L+ +  LD+L++LQ KE ML
Sbjct:  126 KELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERML 164          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 8.986e-46
Identity = 83/120 (69.17%), Postives = 98/120 (81.67%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            MGRG+VELK IENKINRQVTFAKRR  LLKKAYELSVLCDAEVALIIFS+RGKLYEFCSS SM +TLEKY++C++G+ ++   S +ETQ+S +EY+KLK + EALQ  QR   G   G L
Sbjct:    1 MGRGRVELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSTSMLKTLEKYQKCNFGSPESTIIS-RETQSSQQEYLKLKNRVEALQRSQRNLLGEDLGPL 119          

HSP 2 Score: 47.3654 bits (111), Expect = 8.986e-46
Identity = 23/39 (58.97%), Postives = 32/39 (82.05%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            KELEQLERQL SSL ++RS + +  LD+L++LQ +E+ML
Sbjct:  122 KELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQML 160          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 2.594e-45
Identity = 83/121 (68.60%), Postives = 99/121 (81.82%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKETQ-ASYEEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFCSS SM +TLE+Y++C+YG  + N  + +  + +S +EY+KLK ++EALQ  QR   G   G L
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGPL 121          

HSP 2 Score: 41.2022 bits (95), Expect = 2.594e-45
Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            KELE LERQL  SL ++RS + +  LD+L +LQ KE  L
Sbjct:  124 KELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHAL 162          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 9.745e-45
Identity = 83/122 (68.03%), Postives = 94/122 (77.05%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYGTLQANHQSAKE--TQASYEEYIKLKEKHEALQHLQRQYWGGRFGTL 621
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFCS  SM +TLE+Y++ SYG      Q+ +    Q+S  EY+KLK + E LQ  QR   G   GTL
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLGTL 122          

HSP 2 Score: 47.3654 bits (111), Expect = 9.745e-45
Identity = 22/39 (56.41%), Postives = 32/39 (82.05%), Query Frame = 3
Query:  630 KELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            KELEQLE+QL SSL  +RS + ++ LD+L++LQ +E+ML
Sbjct:  125 KELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQML 163          
BLAST of EY728832 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.270e-44
Identity = 80/116 (68.97%), Postives = 94/116 (81.03%), Query Frame = 1
Query:  262 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFCSSPSMHQTLEKYERCSYG--TLQANHQSAKETQASYEEYIKLKEKHEALQHLQRQYWG 603
            MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEFCS+ SM +TLEKY++CSY        ++ +++ +AS  EY+KLK + E LQ  QR   G
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLG 116          

HSP 2 Score: 45.8246 bits (107), Expect = 1.270e-44
Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 3
Query:  603 GKIWDA*AXKELEQLERQLGSSLGRVRSLKNRNQLDKLSELQGKEEML 746
            G+  D+   KELE LE+QL SSL  VR+ + ++ +D+L+ELQ KE+M+
Sbjct:  116 GEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMV 163          
The following BLAST results are available for this feature:
BLAST of EY728832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
SEP1_ARATH2.477e-5270.83Developmental protein SEPALLATA 1 OS=Arabidopsis t... [more]
CMB1_DIACA1.585e-5170.83MADS-box protein CMB1 OS=Dianthus caryophyllus GN=... [more]
SEP2_ARATH2.692e-5169.17Developmental protein SEPALLATA 2 OS=Arabidopsis t... [more]
AGL3_ARATH1.296e-4773.04Agamous-like MADS-box protein AGL3 OS=Arabidopsis ... [more]
SEP3_ARATH3.741e-4768.29Developmental protein SEPALLATA 3 OS=Arabidopsis t... [more]
AGL9_SINAL8.281e-4768.29Agamous-like MADS-box protein AGL9 homolog OS=Sina... [more]
AGL9_ARADE8.986e-4669.17Agamous-like MADS-box protein AGL9 homolog OS=Aran... [more]
AGL9_PETHY2.594e-4568.60Agamous-like MADS-box protein AGL9 homolog OS=Petu... [more]
MADS8_ORYSJ9.745e-4568.03MADS-box transcription factor 8 OS=Oryza sativa su... [more]
MADS7_ORYSJ1.270e-4468.97MADS-box transcription factor 7 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-B11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728832 ID=EY728832; Name=EY728832; organism=Citrus sinensis; type=EST; length=879bp
CACGCGTCCGGATGAAACAAACCAATTAGCAAAATTAAAGGTACCCAACT
CAGATCAAGTCAATTTAATCTCTCCTTTTAGGAGTGTTCTATACTAAATC
TTAAACCTAGCTATCAAAGCAACCTGATCCCAGCTTCTTGCCCTAAACAA
CAAGATCTGCAGAAACAAAATCTACTAATTTATAATTTATTTTTTAGCCT
AAAGAAACCCAAAAAAAACAAAAAATCATCCAGCTATCCAGCACTTGTAA
GTATATTAATAATGGGAAGGGGAAAAGTAGAGCTGAAGAGGATAGAGAAC
AAAATAAATCGACAGGTGACTTTTGCAAAGAGAAGGAATGGATTGTTAAA
GAAAGCTTATGAGCTCTCAGTTTTGTGTGATGCTGAGGTTGCTCTTATCA
TCTTCTCTAGCCGCGGGAAGCTCTATGAATTCTGCAGCAGCCCTAGTATG
CACCAGACACTTGAGAAGTATGAAAGGTGTAGTTATGGAACACTGCAAGC
AAATCATCAATCAGCCAAAGAGACGCAGGCCAGCTACGAGGAATACATAA
AACTCAAAGAGAAACATGAGGCCCTACAGCACTTGCAAAGACAATATTGG
GGGGGAAGATTTGGGACGCTTAGGCTTANAAGGAGTTGGAACAGCTTGAG
AGACAGCTGGGCAGTTCATTGGGCCGAGTAAGGTCACTCAAGAACCGGAA
TCAGCTGGATAAGCTTTCTGAACTTCAAGGAAAGGAAGAAATGTTGCTGG
GAAGCCCATATATTTAAGTATGAAGTTGGGAGGAATAATGCAGTCGGAAT
CCATCATGGCAGTGAGAACAAATAATAACACAATGTCATCGAGGTCTTGG
CCTACACATGTATGCCTGGTCCCCTGATA
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