EY728826

Overview
NameEY728826
Unique NameEY728826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728826 vs. ExPASy Swiss-Prot
Match: COP1_PEA (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 7.944e-79
Identity = 150/242 (61.98%), Postives = 184/242 (76.03%), Query Frame = 2
Query:   11 DSSDIISNPCNIQGWKGSSDAQSKKTDEKAQISSQG--LLMKDACGGPDSPYASQSGLTAARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHGDLFHAANIISSIEFDRDDELFATAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWXQYTKNLIASSDYDGIVTIWDXXTSQSVMEYEEHENELECVDXSCT 730
            +SS + S+P N++G   SS + +KK D K+QISS G  +  +D   G DS Y +QSGL   RK+RV  Q NDL+E YLQKRRQ+  + H + E D   +SREGY  GL+DF+SVL TFT+YSRLRVIAE+RHGD+FH+ANI+SSIEFDRDD+LFATAGVSRRIK+F+FS+VVNEP D H P+VEM TRSKLSCLSW +Y KN IASSDY+GIVT+W   T +S+MEYEEHE     VD S T
Sbjct:  231 NSSGLASSPLNLRGGL-SSGSHTKKNDGKSQISSHGHGIQRRDPITGSDSQYINQSGLALVRKKRVHTQFNDLQECYLQKRRQAADKPHGQQERDTNFISREGYSCGLDDFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEMTTRSKLSCLSWNKYAKNQIASSDYEGIVTVWTMTTRKSLMEYEEHEKRAWSVDFSRT 471          
BLAST of EY728826 vs. ExPASy Swiss-Prot
Match: COP1_ARATH (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2)

HSP 1 Score: 286.96 bits (733), Expect = 9.711e-77
Identity = 149/243 (61.32%), Postives = 178/243 (73.25%), Query Frame = 2
Query:    2 HASDSSDIISNPCNIQGWKGSSDAQSKKTDEKAQISSQGLLMKDACGGPDSPYASQSGLTAARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHGDLFHAANIISSIEFDRDDELFATAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWXQYTKNLIASSDYDGIVTIWDXXTSQSVMEYEEHENELECVDXSCT 730
            H  +     SN  +I+G     + Q+KK + KAQ SS GL  KDA  G DS   +QS ++ ARK+R+ AQ NDL+E YLQKRRQ   Q + + E D   V REGY  GL DF+SVL TFT+YSRLRVIAE+RHGD+FH+ANI+SSIEFDRDDELFATAGVSR IK+F+FSSVVNEP D+  P+VEM TRSKLSCLSW ++ KN IASSDY+GIVT+WD  T QS+MEYEEHE     VD S T
Sbjct:  232 HEKNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQECYLQKRRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRT 474          
BLAST of EY728826 vs. ExPASy Swiss-Prot
Match: SPA1_ARATH (Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.958e-33
Identity = 81/239 (33.89%), Postives = 128/239 (53.56%), Query Frame = 2
Query:   68 DAQSKKTDEKAQISSQGLLMKDACGGPDSPYASQSG---LTAARKQRVRAQLNDLKEYYLQKRRQ-------STAQSHK---------EDEGDLYAVSREGYHPG-LEDFRSVLATFTQYSRLRVIAELRHGDLFHAANIISSIEFDRDDELFATAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWXQYTKNLIASSDYDGIVTIWDXXTSQSVMEYEEHENELECVDXS 724
            +A+ + +   + + S G + K     P   + + S    +  A   R+ + +  L++ Y   R Q       +TA+S K         E++ +   +S +G     LE F   L  F +YS+      +R GDL ++A+++ S+ FD D+E  A AG+S++IKIF+F++ +NE   VHYP+VEM  +SKLSC+ W  Y KN +AS+DYDG+V IWD  T Q   +Y EH+     VD S
Sbjct:  579 EAERRYSSNVSLVRSHGAIEKRVQSSPLDEHCTTSSALFVPTANTDRLMSNIRQLEDAYFFMRSQINLSSSAATARSDKTLKDRDRCSENQNENQDMSTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFS 817          
BLAST of EY728826 vs. ExPASy Swiss-Prot
Match: RFWD2_MOUSE (E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.958e-33
Identity = 75/180 (41.67%), Postives = 113/180 (62.78%), Query Frame = 2
Query:  182 AARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHG-DLFHAANIISSIEFDRDDELFATAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWXQYTKNLIASSDYDGIVTIWDXXTSQSVMEYEEHENELECVD 718
            A+R++R+ A   DL++ Y      ST  S   D+      SR      L++F+  L+ FT+Y+ +R +A L +  DL++ ++I+SSIEFDRD + FA AGV+++IK++E+ +V+ +  D+HYP  EM   SK+SC+SW  Y KNL+ASSDY+G V +WD  T Q    Y+EHE     VD
Sbjct:  356 ASRRKRLTAHFEDLEQCYF-----STRMSRISDD------SRTASQ--LDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVD 522          
BLAST of EY728826 vs. ExPASy Swiss-Prot
Match: RFWD2_HUMAN (E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.958e-33
Identity = 75/180 (41.67%), Postives = 113/180 (62.78%), Query Frame = 2
Query:  182 AARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHG-DLFHAANIISSIEFDRDDELFATAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWXQYTKNLIASSDYDGIVTIWDXXTSQSVMEYEEHENELECVD 718
            A+R++R+ A   DL++ Y      ST  S   D+      SR      L++F+  L+ FT+Y+ +R +A L +  DL++ ++I+SSIEFDRD + FA AGV+++IK++E+ +V+ +  D+HYP  EM   SK+SC+SW  Y KNL+ASSDY+G V +WD  T Q    Y+EHE     VD
Sbjct:  354 ASRRKRLTAHFEDLEQCYF-----STRMSRISDD------SRTASQ--LDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVD 520          
BLAST of EY728826 vs. ExPASy Swiss-Prot
Match: SPA3_ARATH (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.607e-33
Identity = 65/133 (48.87%), Postives = 97/133 (72.93%), Query Frame = 2
Query:  326 LEDFRSVLATFTQYSRLRVIAELRHGDLFHAANIISSIEFDRDDELFATAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWXQYTKNLIASSDYDGIVTIWDXXTSQSVMEYEEHENELECVDXS 724
            ++ F   L  +  +S+LRV A+L+ GDL +++N++ ++ FDR+ ELFATAGV+++IKIFE +S+VN+ RD+HYP+VE+  RSKLS L W  Y K+ IASS++DG+V IWD   SQ V E +EH+  +  +D S
Sbjct:  503 IDPFLEGLCRYLSFSQLRVKADLKQGDLLNSSNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDIS 635          
BLAST of EY728826 vs. ExPASy Swiss-Prot
Match: SPA4_ARATH (Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.579e-32
Identity = 67/159 (42.14%), Postives = 104/159 (65.41%), Query Frame = 2
Query:  248 RQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHGDLFHAANIISSIEFDRDDELFATAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWXQYTKNLIASSDYDGIVTIWDXXTSQSVMEYEEHENELECVDXS 724
            R S   S  +   D    SR+G    ++ F   L  +  +S+LRV A+L+ GDL +++N++ +I FDRD E FATAGV+++IKIFE  S++ + RD+HYP+VE+ +RSKLS + W  Y K+ +ASS+++G+V +WD   +Q V E +EHE  +  +D S
Sbjct:  429 RSSEKSSMSQPSKDPINDSRQG--GWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYS 585          
BLAST of EY728826 vs. ExPASy Swiss-Prot
Match: SPA2_ARATH (Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.723e-31
Identity = 62/126 (49.21%), Postives = 86/126 (68.25%), Query Frame = 2
Query:  347 LATFTQYSRLRVIAELRHGDLFHAANIISSIEFDRDDELFATAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWXQYTKNLIASSDYDGIVTIWDXXTSQSVMEYEEHENELECVDXS 724
            L  + +YS+      LR  +L + +N+I S+ FDRD++ FATAGVS++IKI+EF+S+ NE  D+HYP +EMP RSKLS + W  Y +N +ASSDYDGIV +WD  T Q++  + EHE     VD S
Sbjct:  699 LCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFS 824          
The following BLAST results are available for this feature:
BLAST of EY728826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
COP1_PEA7.944e-7961.98E3 ubiquitin-protein ligase COP1 OS=Pisum sativum ... [more]
COP1_ARATH9.711e-7761.32E3 ubiquitin-protein ligase COP1 OS=Arabidopsis th... [more]
SPA1_ARATH2.958e-3333.89Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis th... [more]
RFWD2_MOUSE2.958e-3341.67E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus ... [more]
RFWD2_HUMAN2.958e-3341.67E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens ... [more]
SPA3_ARATH8.607e-3348.87Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=... [more]
SPA4_ARATH5.579e-3242.14Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=... [more]
SPA2_ARATH4.723e-3149.21Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-B05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728826 ID=EY728826; Name=EY728826; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGACAGCAGTGATATTATCTCTAACCCCTGCAACATACAAG
GCTGGAAAGGTTCATCTGATGCACAGAGCAAGAAGACTGATGAGAAGGCT
CAAATAAGCTCTCAAGGACTGCTAATGAAGGATGCTTGCGGTGGACCTGA
TTCGCCATATGCATCTCAATCTGGTCTGACTGCAGCAAGAAAGCAACGAG
TCCGTGCTCAGTTAAATGACTTAAAAGAGTATTACTTGCAAAAGCGGCGG
CAATCGACCGCACAATCGCATAAAGAGGATGAAGGGGACTTATATGCAGT
AAGTAGAGAAGGTTATCATCCTGGTCTTGAGGATTTCCGGTCCGTCCTTG
CTACTTTTACTCAGTACAGTCGACTGAGGGTCATTGCTGAACTTAGGCAT
GGAGACCTGTTCCATGCTGCCAATATTATCTCCAGTATAGAATTTGACCG
TGATGACGAGTTGTTTGCTACTGCTGGAGTTTCAAGGCGCATTAAGATTT
TTGAGTTTTCCTCGGTGGTGAATGAACCAAGAGATGTGCATTATCCCATG
GTGGAGATGCCTACTCGATCTAAACTTAGTTGCTTGAGTTGGAANCAGTA
CACAAAAAACCTTATTGCTAGCAGTGATTATGACGGGATAGTAACTATCT
GGGATGNTANCACTAGTCAGAGTGTGATGGAATATGAGGAGCATGAAAAC
GAGCTGGAGTGTGTTGATNNTTCATGCACGGGAACCTTCCATGCTATTAT
CCGGAAATGATGACTGCAAGGTTACATTGGATGTTCTGGTTAACATCACA
CTTTACGGCCGGCCCGGCTGGAATTTTCGGCTCAGAGGGATGATTTCGGC
CGACTCCGGATTTATTCACGGGG
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