EY728825

Overview
NameEY728825
Unique NameEY728825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9149 contig Csv1_Contig9149:1..612. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
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BLAST of EY728825 vs. ExPASy Swiss-Prot
Match: ALDH_VIBHA (NADP-dependent fatty aldehyde dehydrogenase OS=Vibrio harveyi GN=aldH PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.423e-24
Identity = 59/153 (38.56%), Postives = 79/153 (51.63%), Query Frame = 1 
Query:  166 GERGRTSGQMRLFAKVLRRGDFYGARIXXXXXXXXXXXXXXXXQYRIGLGPVAVFGASNFPLAFSXXXXXXXXXXXXXCPVVFKAHSGHMATAERVAEAIMRAAQSTGMPD--XXXXXXXXXXXXETLVWLPVIRAVGLTGSLKGGRALCDMA 618
            GE  RT+ Q+RLFA V+  G ++ A +                + +I LGPVAVFGASNFPLAFS             CPV+ K H+ H  T++ VAE I +A +   +P               + LV  P I+AVG TGS+ GGRAL ++A
Sbjct:   89 GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 241

HSP 2 Score: 35.4242 bits (80), Expect = 1.423e-24
Identity = 19/42 (45.24%), Postives = 23/42 (54.76%), Query Frame = 3 
Query:   36 YRSLSAQHRASFLEAITDELDVLGDDFIALVCRETALPAGRI 161
            +R L+   RAS L  I  EL+   DD IA    ETALP  R+
Sbjct:   46 FRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRL 87
The following BLAST results are available for this feature:
BLAST of EY728825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ALDH_VIBHA1.423e-2438.56NADP-dependent fatty aldehyde dehydrogenase OS=Vib... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-B04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728825 ID=EY728825; Name=EY728825; organism=Citrus sinensis; type=EST; length=619bp
CGGCAGTCAACGCCGCAGCAGCGGCTTACCCGGTTTATCGCAGCCTGAGC
GCGCAGCATCGTGCGTCGTTCCTGGAGGCGATAACCGATGAGCTGGACGT
CCTTGGTGATGACTTTATCGCCTTGGTCTGCCGCGAAACGGCGTTGCCCG
CCGGGCGTATCCATCGGCGAACGCGGCCGTACCAGCGGCCAGATGCGGCT
GTTCGCCAAGGTGCTGCGGCGCGGTGATTTCTACGGGGCGCGGATCGATC
TGGCGCTGCCGGATCGCCTGCCTTTGCCACGCCCGGATTTGCGCCAGTAC
CGCATCGGTCTCGGCCCGGTCGCCGTGTTTGGGGCGAGTAATTTTCCCTT
GGCCTTTTCCACTGCCGGTGGCGACACCGCCGCCGCGCTGGCGGCCGGCT
GCCCGGTGGTGTTCAAGGCCCACAGCGGCCATATGGCCACTGCCGAGCGG
GTCGCCGAAGCGATCATGCGGGCGGCGCAGAGCACCGGCATGCCCGACGG
CGTGTTCAATGTGATCTTCGGCGGCGGGGTGGGTGAAACACTGGTCTGGC
TGCCGGTAATCCGCGCCGTGGGTCTCACCGGCTCGCTCAAGGGTGGCCGG
GCCCTGTGTGATATGGCGA
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