EY728810

Overview
NameEY728810
Unique NameEY728810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728810 vs. ExPASy Swiss-Prot
Match: PANE_PSEAE (Probable 2-dehydropantoate 2-reductase OS=Pseudomonas aeruginosa GN=panE PE=3 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 3.501e-76
Identity = 125/201 (62.19%), Postives = 144/201 (71.64%), Query Frame = 1
Query:    1 TWHVLGAGSLGTXXXXXXXXXXXXXXXXXXDHARLASYQTGKGLTLVEHGVAHTYPVVGETSDSPGPIHRLLVACKAYDAQEAVAQLEHRLAPHAELILLQNGLGSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLGDASHPTPPLWLDDLQAAGIPHAWSTDILTRLWRKLALNCAINPLTVLYQCRNGG 603
            TWH+LGAGSLG+                  D  RL  YQ   GL+LVE G A  YP+  ET D   PI RLL+ACKAYDA+EA + + HRLA +AEL+LLQNGLGSQ AVAA+LP++RC+FASSTEGAFR+ D+RVVFAG G+TWLGD      P WL  L  AGIPH+WS DIL RLWRKLALNCAINPLTVL+ CRNGG
Sbjct:    2 TWHILGAGSLGSLWAARLGRAGLPVRLILRDRQRLRRYQQAGGLSLVEDGQASLYPIAAETPDGGQPIQRLLLACKAYDAEEAASSVAHRLAGNAELLLLQNGLGSQQAVAARLPRSRCLFASSTEGAFRDGDFRVVFAGRGHTWLGDPRDTNAPAWLTQLSQAGIPHSWSDDILERLWRKLALNCAINPLTVLHDCRNGG 202          

HSP 2 Score: 50.8322 bits (120), Expect = 3.501e-76
Identity = 24/36 (66.67%), Postives = 26/36 (72.22%), Query Frame = 3
Query:  720 VIQAXAGXYSSMYQDVAHARRTEISYLLGYACPAGR 827
            VI A A  YSSM+QDV   RRTEI YLLGYAC  G+
Sbjct:  240 VIDATAANYSSMHQDVTRGRRTEIGYLLGYACQHGQ 275          
BLAST of EY728810 vs. ExPASy Swiss-Prot
Match: PANE_VIBCH (2-dehydropantoate 2-reductase OS=Vibrio cholerae GN=panE PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.132e-21
Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 1
Query:  211 LLVACKAYDAQEAVAQLEHRLAPHAELILLQNGLGSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLG--DASHPTPPLWLDDLQAAGIPHAWSTDILTRLWRKLALNCAINPLTVLYQCRNGGTASP 615
            LL+  KA+  + A+  L   L     L+ + NG+G+ +A++  L     +FA++T GA + +  +V   G G T +G  +A         D    A  P  W+ +I   LWRKLA+NCAINPLT ++QC NG   +P
Sbjct:   63 LLITVKAWQVEAALQPLLPHLNRETILLFMHNGMGAVEAISESLTHFPVLFATTTHGALKATLNQVSHTGFGQTQVGPFNALGARCDFIADVFNHALAPVTWNPEIQQALWRKLAVNCAINPLTAIHQCANGALVAP 199          

HSP 2 Score: 39.2762 bits (90), Expect = 1.132e-21
Identity = 19/36 (52.78%), Postives = 23/36 (63.89%), Query Frame = 3
Query:  717 RVIQAXAGXYSSMYQDVAHARRTEISYLLGYACPAG 824
            +VIQA A   SSM+QDV H R TEI ++ GY    G
Sbjct:  234 QVIQATAANLSSMHQDVFHRRPTEIDFITGYVVRKG 269          
BLAST of EY728810 vs. ExPASy Swiss-Prot
Match: PANE_YERPE (2-dehydropantoate 2-reductase OS=Yersinia pestis GN=panE PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.315e-18
Identity = 52/137 (37.96%), Postives = 69/137 (50.36%), Query Frame = 1
Query:  211 LLVACKAYDAQEAVAQLEHRLAPHAELILLQNGLGSQDAVAAQLPQARCIFASS-TEGAFRESDWRVVFAGHGYTWLGDASHPTPPLWLDDLQAAGIPH------AWSTDILTRLWRKLALNCAINPLTVLYQCRNG 600
            LLV  KA+    AV  L  +L P  +++LL NG+G+Q+    +LP    +F    T  A R     ++    G T +G    PT  + +DD   A   H      AW  DI    W+KLA+NC INPLT LY CRNG
Sbjct:   67 LLVCLKAWQVSSAVTALLPKLNPECKILLLHNGMGTQE----ELPLNEHVFLHGVTTHAARRDGNTIIHVASGMTHIG----PTSSVIIDDNHLADTLHQALPDVAWHNDISAACWQKLAVNCVINPLTGLYNCRNG 195          

HSP 2 Score: 30.8018 bits (68), Expect = 2.315e-18
Identity = 14/32 (43.75%), Postives = 20/32 (62.50%), Query Frame = 3
Query:  714 SRVIQAXAGXYSSMYQDVAHARRTEISYLLGY 809
            + VI++ A   SS+ QD+   R TEI Y+ GY
Sbjct:  232 NNVIRSTADNTSSLLQDLRSQRHTEIDYITGY 263          
BLAST of EY728810 vs. ExPASy Swiss-Prot
Match: PANE_SALTY (2-dehydropantoate 2-reductase OS=Salmonella typhimurium GN=panE PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.585e-15
Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = 1
Query:  211 LLVACKAYDAQEAVAQLEHRLAPHAELILLQNGLGSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLGDASHPTPPL-WLDDLQAAGIPH-AWSTDILTRLWRKLALNCAINPLTVLYQCRNG 600
            LLV  KA+   +AV  L   L   + ++L+ NG+G+ + +  Q  Q   +  + T  A R+ +  ++   +G T +G A        +L D+    +P  AW  +I   +WRKLA+NC INPLT L+ C NG
Sbjct:   67 LLVTLKAWQVSDAVRTLASTLPVTSPILLIHNGMGTIEEL--QNIQQPMLMGTITHAARRDGNI-IIHVANGTTHIGPAREQDGDYSYLADILQGVLPDVAWHNNIRAEMWRKLAVNCVINPLTALWNCPNG 195          

HSP 2 Score: 33.113 bits (74), Expect = 3.585e-15
Identity = 17/38 (44.74%), Postives = 21/38 (55.26%), Query Frame = 3
Query:  717 RVIQAXAGXYSSMYQDVAHARRTEISYLLGYACPAGRL 830
            +VI + A   SSM QDV   R TEI Y+ GY     R+
Sbjct:  233 QVIDSTAENISSMLQDVRAMRHTEIDYITGYLLKRARV 270          
BLAST of EY728810 vs. ExPASy Swiss-Prot
Match: PANE_ECO57 (2-dehydropantoate 2-reductase OS=Escherichia coli O157:H7 GN=panE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.659e-15
Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = 1
Query:  211 LLVACKAYDAQEAVAQLEHRLAPHAELILLQNGLGSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLGDASHPTPPL-WLDDLQAAGIPH-AWSTDILTRLWRKLALNCAINPLTVLYQCRNG 600
            LLV  KA+   +AV  L   L     ++L+ NG+G+ + +  Q  Q   +  ++T  A R+ +  ++   +G T +G A        +L D+    +P  AW  +I   LWRKLA+NC INPLT ++ C NG
Sbjct:   67 LLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEEL--QNIQQPLLMGTTTHAACRDGNV-IIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNG 195          

HSP 2 Score: 30.8018 bits (68), Expect = 4.659e-15
Identity = 15/31 (48.39%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  717 RVIQAXAGXYSSMYQDVAHARRTEISYLLGY 809
            +VI A A   SSM QD+   R TEI Y+ G+
Sbjct:  233 QVIDATAENISSMLQDIRTLRHTEIDYINGF 263          
BLAST of EY728810 vs. ExPASy Swiss-Prot
Match: PANE_SHIFL (2-dehydropantoate 2-reductase OS=Shigella flexneri GN=panE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.054e-15
Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = 1
Query:  211 LLVACKAYDAQEAVAQLEHRLAPHAELILLQNGLGSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLGDASHPTPPL-WLDDLQAAGIPH-AWSTDILTRLWRKLALNCAINPLTVLYQCRNG 600
            LLV  KA+   +AV  L   L     ++L+ NG+G+ + +  Q  Q   +  ++T  A R+ +  ++   +G T +G A        +L D+    +P  AW  +I   LWRKLA+NC INPLT ++ C NG
Sbjct:   67 LLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEEL--QNIQQPLLMGTTTHAARRDGNV-IIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNG 195          

HSP 2 Score: 30.8018 bits (68), Expect = 6.054e-15
Identity = 15/31 (48.39%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  717 RVIQAXAGXYSSMYQDVAHARRTEISYLLGY 809
            +VI A A   SSM QD+   R TEI Y+ G+
Sbjct:  233 QVIDATAENISSMLQDIRALRHTEIDYINGF 263          
BLAST of EY728810 vs. ExPASy Swiss-Prot
Match: PANE_ECOLI (2-dehydropantoate 2-reductase OS=Escherichia coli (strain K12) GN=panE PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.054e-15
Identity = 44/132 (33.33%), Postives = 69/132 (52.27%), Query Frame = 1
Query:  211 LLVACKAYDAQEAVAQLEHRLAPHAELILLQNGLGSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLGDASHPTPPL-WLDDLQAAGIPH-AWSTDILTRLWRKLALNCAINPLTVLYQCRNG 600
            LLV  KA+   +AV  L   L     ++L+ NG+G+ + +  Q  Q   +  ++T  A R+ +  ++   +G T +G A        +L D+    +P  AW  +I   LWRKLA+NC INPLT ++ C NG
Sbjct:   67 LLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEEL--QNIQQPLLMGTTTHAARRDGNV-IIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNG 195          

HSP 2 Score: 30.8018 bits (68), Expect = 6.054e-15
Identity = 15/31 (48.39%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  717 RVIQAXAGXYSSMYQDVAHARRTEISYLLGY 809
            +VI A A   SSM QD+   R TEI Y+ G+
Sbjct:  233 QVIDATAENISSMLQDIRALRHTEIDYINGF 263          
BLAST of EY728810 vs. ExPASy Swiss-Prot
Match: PANE_SALTI (2-dehydropantoate 2-reductase OS=Salmonella typhi GN=panE PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.867e-15
Identity = 43/132 (32.58%), Postives = 69/132 (52.27%), Query Frame = 1
Query:  211 LLVACKAYDAQEAVAQLEHRLAPHAELILLQNGLGSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLGDASHPTPPL-WLDDLQAAGIPH-AWSTDILTRLWRKLALNCAINPLTVLYQCRNG 600
            LLV  KA+   +AV  L   L   + ++L+ NG+G+ + +  Q  Q   +  + T  A R+ +  ++   +G T +G A        +L ++    +P  AW  +I   +WRKLA+NC INPLT L+ C NG
Sbjct:   67 LLVTLKAWQVSDAVRTLASTLPVTSPILLIHNGMGTIEEL--QSIQQPMLMGAITHAARRDGNI-IIHVANGTTHIGPAREQDGDYSYLAEILQGVLPDVAWHNNIRAEMWRKLAVNCVINPLTALWNCPNG 195          

HSP 2 Score: 33.113 bits (74), Expect = 7.867e-15
Identity = 17/38 (44.74%), Postives = 21/38 (55.26%), Query Frame = 3
Query:  717 RVIQAXAGXYSSMYQDVAHARRTEISYLLGYACPAGRL 830
            +VI + A   SSM QDV   R TEI Y+ GY     R+
Sbjct:  233 QVIDSTAENISSMLQDVRAMRHTEIDYITGYLLKRARV 270          
The following BLAST results are available for this feature:
BLAST of EY728810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PANE_PSEAE3.501e-7662.19Probable 2-dehydropantoate 2-reductase OS=Pseudomo... [more]
PANE_VIBCH1.132e-2135.042-dehydropantoate 2-reductase OS=Vibrio cholerae G... [more]
PANE_YERPE2.315e-1837.962-dehydropantoate 2-reductase OS=Yersinia pestis G... [more]
PANE_SALTY3.585e-1533.332-dehydropantoate 2-reductase OS=Salmonella typhim... [more]
PANE_ECO574.659e-1533.332-dehydropantoate 2-reductase OS=Escherichia coli ... [more]
PANE_SHIFL6.054e-1533.332-dehydropantoate 2-reductase OS=Shigella flexneri... [more]
PANE_ECOLI6.054e-1533.332-dehydropantoate 2-reductase OS=Escherichia coli ... [more]
PANE_SALTI7.867e-1532.582-dehydropantoate 2-reductase OS=Salmonella typhi ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-H07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728810 ID=EY728810; Name=EY728810; organism=Citrus sinensis; type=EST; length=831bp
ACCTGGCATGTCCTCGGCGCTGGCAGCCTCGGAACATTGTGGGCTGCCCG
CCTGGCCCGCGCCCGGTTGCCGGTGCGCCTGATCCTGCGGGACCACGCGC
GGCTGGCGAGCTATCAGACCGGCAAGGGCCTGACCCTGGTCGAGCACGGC
GTGGCTCACACCTATCCAGTCGTCGGCGAAACATCCGACAGCCCTGGGCC
GATTCATCGCCTGCTGGTGGCGTGCAAAGCCTACGACGCCCAAGAGGCCG
TCGCACAGCTTGAACATCGTCTGGCACCCCACGCCGAGCTGATCCTGCTG
CAAAACGGCCTGGGCAGCCAGGATGCAGTCGCCGCCCAACTGCCCCAAGC
CCGCTGCATCTTCGCCTCCAGCACCGAAGGCGCGTTTCGCGAAAGCGACT
GGCGGGTCGTATTTGCCGGCCATGGCTACACCTGGCTGGGAGATGCGAGC
CACCCTACCCCGCCTCTGTGGCTGGATGACCTGCAAGCCGCCGGCATCCC
CCATGCATGGAGCACCGATATCCTCACCCGCCTGTGGCGCAAACTGGCCC
TGAACTGCGCCATCAACCCGCTGACTGTGCTGTATCAATGCCGCAATGGG
GGAACTGCAAGCCCATCAGTGCGAAAGTGGCCACCCCTGTGCGCCGAACT
CGCCGAACTGCTGGAATGTGCTGCGGCCACCCGCCGCCGCGCAGGATTGC
AGAGCGGAGTTGGAGCCGGGTGATCCAGGCCNCGGCTGGCANTTACTCAT
CGATGTACCAGGACGTGGCCCATGCCCGGCGCACCGAAATCAGCTACTTG
CTGGGCTATGCCTGCCCAGCGGGCCGTCTAA
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