EY728806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFA_ARATH (Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 244.588 bits (623), Expect = 5.008e-64 Identity = 134/238 (56.30%), Postives = 156/238 (65.55%), Query Frame = 3 Query: 69 PLSIT*VSTATKGNHFGLSGNKSLAAVSSNSMYWPNRAENVTESFAPVVNKECSEKRQGNGNTCRLFGIQLVDNSNVEEASPAFTMSGAMGDDRAIPCLDADSDQHSEPSNINRSDVPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYTXXXXXXXXGGR*SMA*VLXHGEENFIYTAEEVKNLVPKVKLQVN 782 P S+ S K FG GNKS VS S +WP A++ ESFA N E +EK+Q NGN CRLFG +LV+N NV+E A ++SGA+ D+ +P + DS Q SEP NIN+SD+PS S D EKS LRSPQESQSRQIRSCTKVHMQG AVGRA+DLTR +CYEDL KKLEEM DI+G+L TKKWQVVYT G + FIYT EEVK L PK KL VN Sbjct: 403 PSSVPLFSPPAKAATFGHGGNKSFG-VSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVN 639
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFI_ORYSJ (Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.568e-41 Identity = 105/218 (48.17%), Postives = 135/218 (61.93%), Query Frame = 3 Query: 129 NKSLAAVSSNSMYWPNRAENVTESFAPVVNKECSEKRQGNGNT-CRLFGIQLVDNSNVEEASPAFTMSGAMGDDRAIPCLDADSDQHSEPSNINRSDVPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYTXXXXXXXXGGR*SMA*VLXHGEENFIYTAEEVKNLVPKVKLQV 779 +K+ ++ SN YW R ++ T+SF+ NK E++Q CRLFGI++ +S VEEA PA T+SG +G D+ + +D DSDQ S+PSN N+SD P S + RSP ESQSRQ+RSCTKV MQG+AVGRAVDLT+ + Y DL KLEEM DI+GDLC K+WQVVYT G + +IY+ EE K L PK KL V Sbjct: 436 SKNEPSILSNQFYWSMR-DSKTDSFSASTNKTRVERKQEPTTMGCRLFGIEI--SSAVEEALPAATVSG-VGYDQTVLSVDVDSDQISQPSNGNKSDAPGTSSE------RSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLPV 643
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFG_ORYSJ (Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.467e-39 Identity = 100/222 (45.05%), Postives = 132/222 (59.46%), Query Frame = 3 Query: 117 GLSGNKSLAAVSSNSMYWPNRAENVTESFAPVVNKECSEKRQGNGNT-CRLFGIQLVDNSNVEEASPAFTMSGAMGDDRAIPCLDADSDQHSEPSNINRSDVPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYTXXXXXXXXGGR*SMA*VLXHGEENFIYTAEEVKNLVPKVKLQV 779 G S +A+S+ YWP R E S++ ++K SEK+Q + CRLFGI++ +S VE SP +SG +G D+ +DA+SDQ S+PS+ N+SD P+ S + SP E+QSRQ+RSCTKV MQG+AVGRAVDLTR Y+DL KLEEM DI+G+L KKW+VVYT G + +IYT EE K L PK KL + Sbjct: 433 GFSTKNEPSALSNKHFYWPMR-ETRANSYSASISKVPSEKKQEPSSAGCRLFGIEI--SSAVEATSPLAAVSG-VGQDQPAASVDAESDQLSQPSHANKSDAPAASSEP------SPHETQSRQVRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLTPKSKLPI 644
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFX_ORYSJ (Auxin response factor 24 OS=Oryza sativa subsp. japonica GN=ARF24 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.209e-17 Identity = 62/184 (33.70%), Postives = 91/184 (49.46%), Query Frame = 3 Query: 237 RQGNGNTCRLFGIQLVDNSNVEE--ASPAFTMSGAMGDDRAIPCLDADSDQHSEPSN-INRSDVPSVSCDAEK--SCLRSPQESQSRQ----IRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYTXXXXXXXXGGR*SMA*VLXHGEENFIYTAEEVKNLVP 761 ++ G++C LFGI L + E + P+ G + D + D+ S+PS + D EK SC + QS+Q RSC KVH QGIA+GR++DLT+F CY++L+ +L++M D G+L +K W VVYT G + FIYT EEV+ + P Sbjct: 626 QKAKGSSCMLFGISLDSPAKPELLISPPSVAFDGKLQQDAL------EEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNP 803
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFB_ARATH (Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 68/209 (32.54%), Postives = 104/209 (49.76%), Query Frame = 3 Query: 213 VNKECSEKRQGNGNTCRLFGIQLVDNSNVEEA--SPAFTMSGAMGDDR-AIPCLDADSDQH--SEPSNINRSDVPSVSCDAEKSCLRSPQESQSR--QIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYTXXXXXXXXGGR*SMA*VLXHGEENFIYTAEEVKNLVPKVKLQVNRSSCRQPNVEVV 818 + +E ++ R+GN CRLFGI L +N N ++ S ++ A G + A P + SDQ S+ +N +R + P+++Q++ RSCTKVH QGIA+GR+VDL++F YE+L+ +L+ + + G+L K W +VYT G + FIYT EEV+ + P SCR VV Sbjct: 642 IQEETAKSREGN---CRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSKGSKSTNDHREQGRPFQTNNPH-----PKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNP------GTLSCRSEEEAVV 836
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSJ (Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.930e-15 Identity = 61/186 (32.80%), Postives = 89/186 (47.85%), Query Frame = 3 Query: 237 RQGNGNTCRLFGIQLVDNSNVE--EASPAFTMSGAMGDDRAIPCLDADS---DQHSEPSNINRS-DVPSVSCDAEKSCLRSPQ-----ESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYTXXXXXXXXGGR*SMA*VLXHGEENFIYTAEEVKNLVP 761 ++ G +C+LFGI L + E ++ + G A D ++ S+PS + D P EK + +SQ RSC KVH QGIA+GR+VDLT+F+ YE+L+ +L++M D G+L G K+W VVYT G + FIYT EEV+ + P Sbjct: 630 QKAKGASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKPLDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNP 815
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSI (Auxin response factor 23 OS=Oryza sativa subsp. indica GN=ARF23 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.930e-15 Identity = 61/186 (32.80%), Postives = 89/186 (47.85%), Query Frame = 3 Query: 237 RQGNGNTCRLFGIQLVDNSNVE--EASPAFTMSGAMGDDRAIPCLDADS---DQHSEPSNINRS-DVPSVSCDAEKSCLRSPQ-----ESQSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYTXXXXXXXXGGR*SMA*VLXHGEENFIYTAEEVKNLVP 761 ++ G +C+LFGI L + E ++ + G A D ++ S+PS + D P EK + +SQ RSC KVH QGIA+GR+VDLT+F+ YE+L+ +L++M D G+L G K+W VVYT G + FIYT EEV+ + P Sbjct: 630 QKAKGASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKPLDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNP 815
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFL_ARATH (Auxin response factor 12 OS=Arabidopsis thaliana GN=ARF12 PE=2 SV=2) HSP 1 Score: 62.7734 bits (151), Expect = 1.785e-13 Identity = 31/69 (44.93%), Postives = 48/69 (69.57%), Query Frame = 3 Query: 453 LRSPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYT 650 LRSP E Q++Q R+CTKV MQG+ +GRAVDL+ + Y+ L+ +LE++ DI+G L +W++ +T Sbjct: 496 LRSPTEIQNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQL-QTRNQWEIAFT 563 HSP 2 Score: 34.2686 bits (77), Expect = 1.785e-13 Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 676 VGDDPWHEFCXMVRKI 723 VGDDPW EFC MV+KI Sbjct: 572 VGDDPWPEFCNMVKKI 587
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFV_ARATH (Auxin response factor 22 OS=Arabidopsis thaliana GN=ARF22 PE=2 SV=2) HSP 1 Score: 62.003 bits (149), Expect = 3.011e-13 Identity = 31/73 (42.47%), Postives = 48/73 (65.75%), Query Frame = 3 Query: 441 EKSCLRSPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYT 650 + LRSP E QS+Q R+CTKV MQG+ + RAVDL+ + Y+ L+ +LEE+ D++G L +W++ +T Sbjct: 490 QSQTLRSPTEIQSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQL-QTRNQWEIAFT 561 HSP 2 Score: 34.2686 bits (77), Expect = 3.011e-13 Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 676 VGDDPWHEFCXMVRKI 723 VGDDPW EFC MV+KI Sbjct: 570 VGDDPWPEFCNMVKKI 585
BLAST of EY728806 vs. ExPASy Swiss-Prot
Match: ARFD_ARATH (Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 3.883e-13 Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 3 Query: 474 QSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMXDIEGDLCGFTKKWQVVYT 650 QS R CTKVH QG VGRA+DL+R + Y+DLL +LE + ++EG L K W+++YT Sbjct: 660 QSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKGWRILYT 718 HSP 2 Score: 33.4982 bits (75), Expect = 3.883e-13 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 676 VGDDPWHEFCXMVRKI 723 VGDDPWH+FC +V KI Sbjct: 727 VGDDPWHDFCNVVWKI 742 The following BLAST results are available for this feature:
BLAST of EY728806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728806 ID=EY728806; Name=EY728806; organism=Citrus sinensis; type=EST; length=820bpback to top |