EY728804

Overview
NameEY728804
Unique NameEY728804
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728804 vs. ExPASy Swiss-Prot
Match: HMUT_YERPE (Hemin-binding periplasmic protein hmuT OS=Yersinia pestis GN=hmuT PE=4 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.743e-18
Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = -2
Query:   13 WMLVACAQAAP-----PARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLSEVGVKVVSVP 309
            ++L  CA   P       R+VT+GG VTEI Y LG GD +V  D +S  P+AA +LP VGY R +  EG+LA+KP ++L SE A P   L +++  GV VV+VP
Sbjct:   10 FILSLCAPLLPLNTLAAERIVTIGGDVTEIAYALGAGDEIVARDSTSQQPQAAQKLPDVGYMRTLNAEGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 113          
BLAST of EY728804 vs. ExPASy Swiss-Prot
Match: HMUS_YERPE (Hemin transport protein hmuS OS=Yersinia pestis GN=hmuS PE=4 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.380e-17
Identity = 43/96 (44.79%), Postives = 61/96 (63.54%), Query Frame = -1
Query:  353 RGTVQIHTGPVDQFTRTVPWYNMVDPKFNLHLDTPAIASAWVVNKPTSDGWVTSLELYSSSGDLIAQFFGERKPGKPELPGWRELMLGLCRVPLAA 640
            RG VQI TG +++ T    W N+ + +F LHL   AIA +W+  KPT DG+VTSLEL+++ G  +AQ +G+R  G+PE   WRE +  L    +AA
Sbjct:  250 RGCVQIFTGLIEKVTPHNEWINVFNQRFTLHLIETAIAESWITRKPTKDGFVTSLELFAADGTQLAQLYGQRTEGQPEQNQWREQIARLINKDIAA 345          
BLAST of EY728804 vs. ExPASy Swiss-Prot
Match: HEMS_YEREN (Hemin transport protein hemS OS=Yersinia enterocolitica GN=hemS PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.354e-17
Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = -1
Query:  353 LGETQSEAGTWLAFIASRAYRGTVQIHTGPVDQFTRTVPWYNMVDPKFNLHLDTPAIASAWVVNKPTSDGWVTSLELYSSSGDLIAQFFGERKPGKPELPGWRELMLGLCRVPLAA 700
            L   Q E    + F+ +R   G VQI TG +++ T    W N+ + +F LHL    IA +W+  KPT DG+VTSLEL+++ G  IAQ +G+R  G+PE   WR+ +  L    +AA
Sbjct:  233 LNIAQQEQNEIMIFVGNR---GCVQIFTGMIEKVTPHQDWINVFNQRFTLHLIETTIAESWITRKPTKDGFVTSLELFAADGTQIAQLYGQRTEGQPEQTQWRDEIARLNNKDIAA 345          
BLAST of EY728804 vs. ExPASy Swiss-Prot
Match: BTUF_VIBVY (Vitamin B12-binding protein OS=Vibrio vulnificus (strain YJ016) GN=btuF PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.256e-14
Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = -2
Query:   25 QAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLSEVGVKV 288
            QAAP  RV++L    TEI Y  G GD+L+   + S YPEAA +L +V  Y+ + +E ++ LKPDL+LA     P + L++L + G K+
Sbjct:   17 QAAPIERVISLAPHATEIAYAAGLGDKLIAVSEMSDYPEAAKKLEKVSNYKGINLEKIITLKPDLILAWPAGNPAKELEKLEQFGFKI 104          
BLAST of EY728804 vs. ExPASy Swiss-Prot
Match: BTUF_VIBVU (Vitamin B12-binding protein OS=Vibrio vulnificus GN=btuF PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = -2
Query:   25 QAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLSEVGVKV 288
            QAAP  RV++L    TEI Y  G GD+L+   + S YPEAA +L +V  Y+ + +E ++ LKPDL++A     P + L++L + G K+
Sbjct:   17 QAAPIERVISLAPHATEIAYAAGLGDKLIAVSEMSDYPEAAKKLEKVSNYKGINLEKIITLKPDLIIAWPAGNPAKELEKLEQFGFKI 104          
BLAST of EY728804 vs. ExPASy Swiss-Prot
Match: BTUF_PHOPR (Vitamin B12-binding protein OS=Photobacterium profundum GN=btuF PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.000e-13
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = -2
Query:   25 PPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLSEVGVKV 279
            P  RV++L    TE+ Y  G GD L+     S YPEAA +L RV  YR V +E ++AL+PDL+LA +   PP  + +L ++G+ V
Sbjct:   20 PALRVISLSPHTTELAYAAGLGDALIAASDYSDYPEAAQKLERVANYRGVKLERIVALQPDLILAWKGGNPPREMAKLEQLGLNV 104          
BLAST of EY728804 vs. ExPASy Swiss-Prot
Match: BTUF_YERPY (Vitamin B12-binding protein OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=btuF PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = -2
Query:   25 MLVACAQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLSEVGVKV 306
            +L   AQAA   RV++L  S TE+ Y  G GD+LV     S YPE+A +L  V  ++ + VE +LALKPDL+LA     P   L +L+ +G+ +
Sbjct:   20 LLTLPAQAAE--RVISLSPSTTELAYAAGLGDKLVAVSAYSDYPESAKKLEHVASWQGINVERILALKPDLILAWRGGNPQRPLDQLAALGIPI 111          
BLAST of EY728804 vs. ExPASy Swiss-Prot
Match: BTUF_YERPS (Vitamin B12-binding protein OS=Yersinia pseudotuberculosis GN=btuF PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = -2
Query:   25 MLVACAQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLSEVGVKV 306
            +L   AQAA   RV++L  S TE+ Y  G GD+LV     S YPE+A +L  V  ++ + VE +LALKPDL+LA     P   L +L+ +G+ +
Sbjct:   20 LLTLPAQAAE--RVISLSPSTTELAYAAGLGDKLVAVSAYSDYPESAKKLEHVASWQGINVERILALKPDLILAWRGGNPQRPLDQLAALGIPI 111          
BLAST of EY728804 vs. ExPASy Swiss-Prot
Match: BTUF_YERPP (Vitamin B12-binding protein OS=Yersinia pestis (strain Pestoides F) GN=btuF PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = -2
Query:   25 MLVACAQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLSEVGVKV 306
            +L   AQAA   RV++L  S TE+ Y  G GD+LV     S YPE+A +L  V  ++ + VE +LALKPDL+LA     P   L +L+ +G+ +
Sbjct:   20 LLTLPAQAAE--RVISLSPSTTELAYAAGLGDKLVAVSAYSDYPESAKKLEHVASWQGINVERILALKPDLILAWRGGNPQRPLDQLAALGIPI 111          
BLAST of EY728804 vs. ExPASy Swiss-Prot
Match: BTUF_YERPN (Vitamin B12-binding protein OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=btuF PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = -2
Query:   25 MLVACAQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLSEVGVKV 306
            +L   AQAA   RV++L  S TE+ Y  G GD+LV     S YPE+A +L  V  ++ + VE +LALKPDL+LA     P   L +L+ +G+ +
Sbjct:   20 LLTLPAQAAE--RVISLSPSTTELAYAAGLGDKLVAVSAYSDYPESAKKLEHVASWQGINVERILALKPDLILAWRGGNPQRPLDQLAALGIPI 111          
The following BLAST results are available for this feature:
BLAST of EY728804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
HMUT_YERPE4.743e-1846.15Hemin-binding periplasmic protein hmuT OS=Yersinia... [more]
HMUS_YERPE1.380e-1744.79Hemin transport protein hmuS OS=Yersinia pestis GN... [more]
HEMS_YEREN2.354e-1739.66Hemin transport protein hemS OS=Yersinia enterocol... [more]
BTUF_VIBVY9.256e-1442.05Vitamin B12-binding protein OS=Vibrio vulnificus (... [more]
BTUF_VIBVU1.579e-1340.91Vitamin B12-binding protein OS=Vibrio vulnificus G... [more]
BTUF_PHOPR6.000e-1342.35Vitamin B12-binding protein OS=Photobacterium prof... [more]
BTUF_YERPY1.478e-1141.49Vitamin B12-binding protein OS=Yersinia pseudotube... [more]
BTUF_YERPS1.478e-1141.49Vitamin B12-binding protein OS=Yersinia pseudotube... [more]
BTUF_YERPP1.478e-1141.49Vitamin B12-binding protein OS=Yersinia pestis (st... [more]
BTUF_YERPN1.478e-1141.49Vitamin B12-binding protein OS=Yersinia pestis bv.... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-G11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728804 ID=EY728804; Name=EY728804; organism=Citrus sinensis; type=EST; length=889bp
CGACGGCGCGTCCGGCACGCTCACGACCTTCACGCCGACTTCGCTCAGGC
GCTTGAGCGCCTCGGGCGGGCCGGCCTGCTCGGACGCCAGCACCAGGTCG
GGCTTGAGCGCCAGCACGCCCTCCACCGGCACCGCGCGGTAATAGCCGAC
GCGCGGCAGCCTGGTCGCGGCTTCCGGGTACAGGCTGGACTGGTCGTCGC
CCACCAGCCTGTCGCCCTGCCCCAGGCCGTACACGATCTCCGTCACGCTA
CCGCCCAGGGTCACCACGCGCGCAGGCGGCGCCGCCTGCGCGCAAGCCAC
CAGCATCCATCCCGCCGCCATCGCCAGCCATTTCTTCATTGCTTCATCCT
CACGCGGCCAACGGCACGCGGCACAGACCCAACATCAATTCGCGCCAGCC
CGGCAGTTCCGGCTTGCCCGGCTTGCGCTCGCCAAAGAACTGCGCGATCA
GGTCGCCGCTGGAAGAATACAGCTCCAGCGACGTCACCCAGCCATCGCTG
GTGGGCTTGTTGACCACCCACGCCGACGCGATGGCGGGGGTGTCCAGATG
CAGGTTGAACTTCGGGTCCACCATGTTATACCACGGGACGGTGCGGGTGA
ACTGATCAACGGGTCCGGTATGGATCTGGACTGTGCCTCGGTAGGCCCGC
GAAGCAATGAAGGCCAGCCATGTGCCCGCTTCAGACTGAGTCTCTCCGAG
ACGGGATCGGGAGTGCGGGCATGCCAAAGCGGTCGCCGCTGGCGTCCGGG
CCGGAAAGCGAACGATGCGTGGTCGGGATGGGTGTGGAGTCCTTAGAGAT
GACAGATACGGAGGGAGAGCAGACTGCGCAGAGCAGGCCATCCTGAGAAG
GAGAGTGGTGGCCGCGCGTACACCACGTCTGGGCTCGGG
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