EY728799

Overview
NameEY728799
Unique NameEY728799
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728799 vs. ExPASy Swiss-Prot
Match: PAP_CITUN (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1)

HSP 1 Score: 394.045 bits (1011), Expect = 5.576e-109
Identity = 206/234 (88.03%), Postives = 210/234 (89.74%), Query Frame = 1
Query:   52 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNGKFEVRSPQRVQIQFEEGIIGTPQVTD 753
            MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAA                       SPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSI+FAGPLATTSISTN KFEVRSP+RVQI+FEEG+IGTPQVTD
Sbjct:    1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDEWGPEKEKEGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTD 234          
BLAST of EY728799 vs. ExPASy Swiss-Prot
Match: LIPC_SOLDE (Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 2.071e-71
Identity = 146/237 (61.60%), Postives = 168/237 (70.89%), Query Frame = 1
Query:   52 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXS---PKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNGKFEVRSPQRVQIQFEEGIIGTPQVTD 753
            MASIS  NQ PCKTL     +++ TSK S LP++S        +   +S++ FT  +P    +A                            PKE +EI+ LKK L DS YGT+RGL+A+SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEEISQTIDSE+FTVQNS+ FAGPLATTSISTN KFEVRSP+RVQI+FEEGIIGTPQ+TD
Sbjct:    1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKFTAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTD 237          
BLAST of EY728799 vs. ExPASy Swiss-Prot
Match: LIPC_SOLTU (Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 3.533e-71
Identity = 146/237 (61.60%), Postives = 167/237 (70.46%), Query Frame = 1
Query:   52 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXS---PKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNGKFEVRSPQRVQIQFEEGIIGTPQVTD 753
            MASIS  NQ PCKTL     +++ TSK S LP++S            +S++ FT  +P    +A                            PKE +EI+ LKK L DS YGT+RGL+A+SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEEISQTIDSE+FTVQNS+ FAGPLATTSISTN KFEVRSP+RVQI+FEEGIIGTPQ+TD
Sbjct:    1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKFTAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTD 237          
BLAST of EY728799 vs. ExPASy Swiss-Prot
Match: CHRC_CUCSA (Chromoplast-specific carotenoid-associated protein, chromoplast OS=Cucumis sativus GN=CHRC PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 6.027e-71
Identity = 145/235 (61.70%), Postives = 170/235 (72.34%), Query Frame = 1
Query:   52 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSV-RISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNGKFEVRSPQRVQIQFEEGIIGTPQVTD 753
            MA +SQ NQ PCKTL+ NPP  Q TSKPS+ P+ S+   +R+ A KS +S++   + R  VL                            P E +EI  LKKALVDSFYGTDRGL  + +TRAEIVELITQLE+KNPTPAPTEALTLLN KWIL YT+F+GLFPLLSR  LPL +VEEISQTIDSEN TVQNS++F+GPLATTSI+TN KFEVRSP RV I+FEEG+IGTPQ+TD
Sbjct:    1 MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISVRPAFKVRA-VLNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGLRVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSR-NLPLVKVEEISQTIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTD 233          
BLAST of EY728799 vs. ExPASy Swiss-Prot
Match: PAP2_BRACM (Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 8.723e-62
Identity = 131/234 (55.98%), Postives = 163/234 (69.66%), Query Frame = 1
Query:   52 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNGKFEVRSPQRVQIQFEEGIIGTPQVTD 753
            MA++   NQFPCKT  Q+  +++  SKP   P + V +S    + SF   + F  +R     R                         + + V E + LK++LVDS YGTDRGL+A+SETRAEI +LITQLE+KNPTPAPT+AL LLN KWIL YTSF GLFPLLSRG +PL +V+EISQTIDS+NFTV+NS+ FAGPLATTSISTN KFE+RSP+RVQI+FEEG+IGTPQ+TD
Sbjct:    1 MATVQFFNQFPCKTRVQSSANSKPLSKP---PSSLVPMSALTRRPSFPPGE-FAVSRSDFRVRVIDAEDELDPETSEGGGSALLMAEEAIESVEETEVLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGLFPLLSRGIVPLVKVDEISQTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTPQLTD 230          
BLAST of EY728799 vs. ExPASy Swiss-Prot
Match: PAP2_ARATH (Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 8.164e-60
Identity = 127/235 (54.04%), Postives = 161/235 (68.51%), Query Frame = 1
Query:   52 MASISQTNQFPCKTLSQNPPHNQFTSKPSIL-PLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNGKFEVRSPQRVQIQFEEGIIGTPQVTD 753
            MA++  + QF C+T     P+++  SKP  L P+ S+ I R +     +++      R +   RA                          ++V E + LK++LVDS YGTDRGL+A+SETRAEI +LITQLE+KNPTPAPTEAL LLN KWIL YTSF  LFPLLSRG +PL +V+EISQTIDS+NFTVQNS+RFAGPL T SISTN KFE+RSP+RVQI+FE+G+IGTPQ+TD
Sbjct:    1 MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSI-IHRPMISTGGIAVS----PRRVFKVRATDTGEIGSALLAAEEAI---------EDVEETERLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEISQTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTD 221          
BLAST of EY728799 vs. ExPASy Swiss-Prot
Match: PAP1_ARATH (Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.375e-59
Identity = 126/238 (52.94%), Postives = 157/238 (65.97%), Query Frame = 1
Query:   52 MASISQTNQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPK---EVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNGKFEVRSPQRVQIQFEEGIIGTPQVTD 753
            MA++    QFPCKTL+ +  + +  SK P +LP+NS+     +         G +  RP    RA                        + K    V E + LK++L DS YGTDRGL+ +S+TRAEI ELITQLE+KNPTPAP EAL LLN KWIL YTSF GLFPLLSR   PL +V+EISQTIDS++FTVQNS+RFAGP +TTS STN KFE+RSP+RVQI+FE+G+IGTPQ+TD
Sbjct:    1 MATVPLFTQFPCKTLNPSSSNTKHQSKSPILLPINSINRRSEI---------GVSVHRPDFKIRATDIDDEWGQDGVERVFASSSTVSVADKAIESVEETERLKRSLADSLYGTDRGLSVSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKVDEISQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTD 229          
BLAST of EY728799 vs. ExPASy Swiss-Prot
Match: PAP2_ORYSJ (Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.458e-56
Identity = 122/178 (68.54%), Postives = 141/178 (79.21%), Query Frame = 1
Query:  331 TEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLP-LARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNGKFEVRSPQRVQIQFEEGIIGTPQVTDH**Y-GKCRILGQR*SLT-LQG-FSLHSRKQFSVAR 852
            +E+  LK  L ++ YGT+RGL A+SETRAE+VELITQLEA+NPTPAPTEALTLLN KWIL YTSFS LFPLL  G+LP L +VEEISQTIDSENFTVQN I+F+GPLATTS+STN KFEVRSP+RVQI+F+EGIIGTPQ+TD      K  + GQ   LT L+G FS       SVAR
Sbjct:   90 SEVAELKAKLKEALYGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPLLGSGSLPQLVKVEEISQTIDSENFTVQNCIKFSGPLATTSVSTNAKFEVRSPKRVQIKFDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVAR 267          
BLAST of EY728799 vs. ExPASy Swiss-Prot
Match: PAP1_BRACM (Plastid lipid-associated protein 1, chloroplastic OS=Brassica campestris GN=PAP1 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.033e-54
Identity = 119/230 (51.74%), Postives = 147/230 (63.91%), Query Frame = 1
Query:   73 NQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRAR--PLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNGKFEVRSPQRVQIQFEEGIIGTPQVTD 753
            +QF CKT   +   + F SK P +LP+N +    ++ +  F            P    R                         + +   E + LK+ L  S YGTDRGL+A+SETRAEI ELITQLE+KNP PAP EAL LLN KWILVYTSF GLFPLLSR   PL +V+EISQTIDS++FTV NS+RFA PLATTS+STN KFEVRSP+RVQ++FE+G+IGTPQ+TD
Sbjct:    9 SQFTCKTPITSSSTSSFQSKSPILLPINPINRRIAVHRHDFKVRASDVNDEWGPDSKGRGGDVDDEWGPEIGLNSSVAEKVAEEAIESAEETERLKRVLAGSLYGTDRGLSASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTSFVGLFPLLSRRISPLVKVDEISQTIDSDSFTVHNSVRFASPLATTSLSTNAKFEVRSPKRVQVKFEQGVIGTPQLTD 238          
BLAST of EY728799 vs. ExPASy Swiss-Prot
Match: PG1_PEA (Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.074e-35
Identity = 70/137 (51.09%), Postives = 99/137 (72.26%), Query Frame = 1
Query:  337 IDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNGKFEVRSPQRVQIQFEEGIIGTPQV 747
            ++ LK++LVD+ YGT+ G  A SE RAE+ E + QLEA NPTPAP E   LLN  W+L+YT+ S L PLL+ G+LPL ++++ISQTID+++FTV NS   + P A+ S S +  FEVRSP R+Q+ F+EG +  P++
Sbjct:  132 LEGLKRSLVDTVYGTELGFRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVLLYTASSELLPLLAAGSLPLLKLDKISQTIDTDSFTVVNSTTLSSPFASFSFSVSASFEVRSPTRIQVTFKEGSLQPPEI 268          
The following BLAST results are available for this feature:
BLAST of EY728799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
PAP_CITUN5.576e-10988.03Plastid-lipid-associated protein, chloroplastic OS... [more]
LIPC_SOLDE2.071e-7161.60Light-induced protein, chloroplastic OS=Solanum de... [more]
LIPC_SOLTU3.533e-7161.60Light-induced protein, chloroplastic OS=Solanum tu... [more]
CHRC_CUCSA6.027e-7161.70Chromoplast-specific carotenoid-associated protein... [more]
PAP2_BRACM8.723e-6255.98Plastid lipid-associated protein 2, chloroplastic ... [more]
PAP2_ARATH8.164e-6054.04Probable plastid-lipid-associated protein 2, chlor... [more]
PAP1_ARATH2.375e-5952.94Probable plastid-lipid-associated protein 1, chlor... [more]
PAP2_ORYSJ2.458e-5668.54Probable plastid-lipid-associated protein 2, chlor... [more]
PAP1_BRACM1.033e-5451.74Plastid lipid-associated protein 1, chloroplastic ... [more]
PG1_PEA1.074e-3551.09Plastoglobulin-1, chloroplastic OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-G04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728799 ID=EY728799; Name=EY728799; organism=Citrus sinensis; type=EST; length=865bp
CCACGCGTCCGGAAAACTGTGTGTTGTAACTGTGTGTTTTTGGAAAAGCT
AATGGCTTCAATATCTCAAACCAACCAGTTCCCGTGCAAGACTCTTTCAC
AAAACCCACCACACAATCAGTTCACCTCGAAGCCTTCAATTCTTCCTTTG
AACTCGGTTCGAATTTCACGGAGTCTCGCCAAGAAATCATTTCTTTCAAT
CCAAGGATTCACTCGGGCCAGGCCGCTGGTTCTAACTCGGGCTGCCGATG
ATGATGAGTGGGGCCCGGAGAAGGAGAAGGAGGAAGGTGGCGCTCTGGCG
GTGGCAGAGGAGGAGAGCCCAAAAGAAGTTACAGAGATTGATAATTTGAA
GAAAGCGCTTGTGGATTCGTTTTATGGGACCGATCGTGGATTGAATGCCA
CAAGTGAGACGAGGGCTGAGATCGTTGAGCTTATTACGCAGCTTGAGGCT
AAGAATCCAACCCCGGCTCCCACCGAGGCCTTAACTCTGCTAAATGCCAA
ATGGATTCTTGTGTACACATCTTTTTCAGGTTTGTTTCCGTTGTTGTCAA
GGGGAACATTGCCATTGGCGAGGGTGGAGGAGATATCTCAGACAATTGAC
TCAGAGAACTTCACGGTCCAGAACTCCATCCGGTTTGCTGGGCCATTGGC
TACAACTTCCATTAGTACCAATGGCAAGTTTGAAGTGCGGAGCCCCCAGC
GTGTGCAGATTCAGTTCGAGGAAGGTATCATTGGGACGCCTCAGGTTACT
GATCACTAGTGATACGGAAAATGTCGAATCTTGGGACAAAGATGATCTCT
CACCCTTCAAGGCTTCTCTCTTCATTCCAGAAAACAGTTTTCTGTTGCAA
GACCTTTCTAGCCAC
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