EY728786

Overview
NameEY728786
Unique NameEY728786
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBE12_WHEAT (Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum GN=UBA2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.779e-29
Identity = 62/109 (56.88%), Postives = 73/109 (66.97%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRLNIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATLSVYHR 425
            LG   LKN+ALMG+SC   G LT+TDDDVIEKSNLSR FLFRDWNIGQ            INP+L++E L NR  PETENV +D FWEN+   +NA D V A + +  R
Sbjct:  473 LGCEFLKNLALMGISCSQNGNLTVTDDDVIEKSNLSRQFLFRDWNIGQPKSTVAATAAMVINPKLHVEALQNRASPETENVFNDAFWENLDAVVNALDNVTARMYIDSR 581          
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBE11_WHEAT (Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum GN=UBA1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.629e-29
Identity = 62/109 (56.88%), Postives = 73/109 (66.97%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRLNIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATLSVYHR 425
            LG   LKN+ALMG+SC   G LT+TDDDVIEKSNLSR FLFRDWNIGQ            INP+L++E L NR  PETENV +D FWEN+   +NA D V A + +  R
Sbjct:  473 LGCEFLKNLALMGISCSQNGNLTLTDDDVIEKSNLSRQFLFRDWNIGQPKSTVAATAAMVINPKLHVEALQNRASPETENVFNDAFWENLDAVVNALDNVTARMYIDSR 581          
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBE13_WHEAT (Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum GN=UBA3 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.352e-28
Identity = 66/119 (55.46%), Postives = 80/119 (67.23%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRLNIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATLSVYHRWL---RPIID 446
            LG   LKN+ALMGVSC ++GKLTITDDD+IEKSNLSR FLFRDWNIGQ            INP L+I+ L NR  P+TENV  DTFWE +   INA D V A + +  R L   +P+++
Sbjct:  476 LGCEFLKNLALMGVSCSSKGKLTITDDDIIEKSNLSRQFLFRDWNIGQAKSTVAATAASAINPSLHIDALQNRACPDTENVFHDTFWEGLDVVINALDNVNARMYMDMRCLYFQKPLLE 594          
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBA1_YEAST (Ubiquitin-activating enzyme E1 1 OS=Saccharomyces cerevisiae GN=UBA1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.573e-21
Identity = 46/121 (38.02%), Postives = 70/121 (57.85%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRL--NIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATLSVYHR---WLRPIID 446
            +G   LKN AL+G+  G+ G + +TD+D IEKSNL+R FLFR  ++G+            +NP L   I    ++VGPETE + +D+FWE++    NA D V A   V  R   + +P+++
Sbjct:  445 IGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVGKNKSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLE 565          

HSP 2 Score: 40.817 bits (94), Expect = 2.573e-21
Identity = 17/33 (51.52%), Postives = 24/33 (72.73%), Query Frame = 2
Query:   20 DKFLVFGAKLQNKLEDAKVFIVGSGALGCEFSK 118
            ++  VFG   Q K+ ++KVF+VGSGA+GCE  K
Sbjct:  419 NQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLK 451          
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBA1_DICDI (Ubiquitin-like modifier-activating enzyme 1 OS=Dictyostelium discoideum GN=uba1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.020e-19
Identity = 42/104 (40.38%), Postives = 60/104 (57.69%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRLNIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATL 410
            +G   LKN A+MG+  G +G + +TD D IEKSNL+R FLFR  +I Q            +NP LN++    RVGP+TE+  ++ F+ ++    NA D V A L
Sbjct:  439 IGCEMLKNFAMMGLGAGPKGLVHVTDMDTIEKSNLNRQFLFRSSDIQQLKSQTAANAVRVMNPDLNVKAYSLRVGPDTESHYNEEFFNSLDGVCNALDNVEARL 542          

HSP 2 Score: 40.4318 bits (93), Expect = 1.020e-19
Identity = 16/32 (50.00%), Postives = 23/32 (71.88%), Query Frame = 2
Query:   23 KFLVFGAKLQNKLEDAKVFIVGSGALGCEFSK 118
            + + FG  LQNK+E+   F+VG+GA+GCE  K
Sbjct:  414 QIITFGKTLQNKIENLNYFLVGAGAIGCEMLK 445          
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBA1Y_MOUSE (Ubiquitin-like modifier-activating enzyme 1 Y OS=Mus musculus GN=Ube1ay PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.170e-19
Identity = 51/119 (42.86%), Postives = 72/119 (60.50%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRLNIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATLSVYHR---WLRPIID 446
            +G   LKN A++G+ CG  G++T+TD D IEKSNL+R FLFR W+I +            INP + I +  NRVGPETE+V DD F++ +    NA D V A L V  R   + +P+++
Sbjct:  478 IGCELLKNFAMIGLGCGEDGEITVTDMDTIEKSNLNRQFLFRPWDITKLKSETAAAAVRDINPHIRIFSHQNRVGPETEHVYDDDFFQKLDGVANALDNVDARLYVDRRCVYYRKPLLE 596          
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBA1_SCHPO (Ubiquitin-activating enzyme E1 1 OS=Schizosaccharomyces pombe GN=ptr3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.918e-19
Identity = 45/111 (40.54%), Postives = 62/111 (55.86%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRL--NIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATLSVYHR 425
            +G   LKN A+MGV+ G  G +++TD D IEKSNL+R FLFR  ++G+            +NP L   I +   RVGPE+E +  D F+E +    NA D V A + V  R
Sbjct:  438 IGCEMLKNWAMMGVATGESGHISVTDMDSIEKSNLNRQFLFRPRDVGKLKSECASTAVSIMNPSLTGKITSYQERVGPESEGIFGDEFFEKLSLVTNALDNVEARMYVDRR 548          

HSP 2 Score: 36.1946 bits (82), Expect = 2.918e-19
Identity = 14/29 (48.28%), Postives = 20/29 (68.97%), Query Frame = 2
Query:   32 VFGAKLQNKLEDAKVFIVGSGALGCEFSK 118
            VFG++ Q K+     F+VG+GA+GCE  K
Sbjct:  416 VFGSEFQEKIASLSTFLVGAGAIGCEMLK 444          
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBA1_HUMAN (Ubiquitin-like modifier-activating enzyme 1 OS=Homo sapiens GN=UBA1 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 4.916e-18
Identity = 46/121 (38.02%), Postives = 72/121 (59.50%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRLNIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATL-----SVYHRWLRPIID 446
            +G   LKN A++G+ CG  G++ +TD D IEKSNL+R FLFR W++ +            +NP + + +  NRVGP+TE + DD F++N+    NA D V A +      VY+R  +P+++
Sbjct:  479 IGCELLKNFAMIGLGCGEGGEIIVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPHIRVTSHQNRVGPDTERIYDDDFFQNLDGVANALDNVDARMYMDRRCVYYR--KPLLE 597          
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBA1_RAT (Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus GN=Uba1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.385e-18
Identity = 46/121 (38.02%), Postives = 72/121 (59.50%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRLNIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATL-----SVYHRWLRPIID 446
            +G   LKN A++G+ CG  G++ +TD D IEKSNL+R FLFR W++ +            +NP + + +  NRVGP+TE + DD F++N+    NA D V A +      VY+R  +P+++
Sbjct:  479 IGCELLKNFAMIGLGCGEGGEVVVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPYIQVTSHQNRVGPDTERIYDDDFFQNLDGVANALDNVDARMYMDRRCVYYR--KPLLE 597          
BLAST of EY728786 vs. ExPASy Swiss-Prot
Match: UBA1_MOUSE (Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus GN=Uba1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.095e-17
Identity = 45/121 (37.19%), Postives = 72/121 (59.50%), Query Frame = 3
Query:   99 LGVSSLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRHFLFRDWNIGQXXXXXXXXXXXXINPRLNIETLPNRVGPETENVCDDTFWENIGCWINA*DTVAATL-----SVYHRWLRPIID 446
            +G   LKN A++G+ CG  G++ +TD D IEKSNL+R FLFR W++ +            +NP + + +  NRVGP+TE + DD F++N+    NA D + A +      VY+R  +P+++
Sbjct:  479 IGCELLKNFAMIGLGCGEGGEVVVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPYIQVTSHQNRVGPDTERIYDDDFFQNLDGVANALDNIDARMYMDRRCVYYR--KPLLE 597          
The following BLAST results are available for this feature:
BLAST of EY728786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
UBE12_WHEAT2.779e-2956.88Ubiquitin-activating enzyme E1 2 OS=Triticum aesti... [more]
UBE11_WHEAT3.629e-2956.88Ubiquitin-activating enzyme E1 1 OS=Triticum aesti... [more]
UBE13_WHEAT2.352e-2855.46Ubiquitin-activating enzyme E1 3 OS=Triticum aesti... [more]
UBA1_YEAST2.573e-2138.02Ubiquitin-activating enzyme E1 1 OS=Saccharomyces ... [more]
UBA1_DICDI1.020e-1940.38Ubiquitin-like modifier-activating enzyme 1 OS=Dic... [more]
UBA1Y_MOUSE1.170e-1942.86Ubiquitin-like modifier-activating enzyme 1 Y OS=M... [more]
UBA1_SCHPO2.918e-1940.54Ubiquitin-activating enzyme E1 1 OS=Schizosaccharo... [more]
UBA1_HUMAN4.916e-1838.02Ubiquitin-like modifier-activating enzyme 1 OS=Hom... [more]
UBA1_RAT8.385e-1838.02Ubiquitin-like modifier-activating enzyme 1 OS=Rat... [more]
UBA1_MOUSE1.095e-1737.19Ubiquitin-like modifier-activating enzyme 1 OS=Mus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-E10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728786 ID=EY728786; Name=EY728786; organism=Citrus sinensis; type=EST; length=666bp
TTAGGTCGACCACGCGTCCGACAAATTTCTAGTGTTTGGGGCCAAGCTCC
AAAATAAGCTGGAGGATGCTAAAGTGTTCATTGTAGGATCTGGTGCACTT
GGGTGTGAGTTCTCTAAAGAATGTGGCGCTGATGGGAGTTTCATGTGGTA
ATCAAGGAAAACTAACTATTACTGATGATGATGTAATTGAAAAGAGTAAC
CTTAGTAGGCACTTTCTCTTCCGTGATTGGAATATTGGGCAGGCCAAATC
CACTGTAGCTGCTTCTGCTGCTACATCAATAAATCCTCGTCTCAACATTG
AAACTTTGCCAAATCGTGTGGGTCCTGAAACAGAGAATGTGTGTGATGAT
ACCTTCTGGGAAAATATAGGGTGCTGGATCAATGCATGAGACACTGTGGC
CGCCACACTGTCTGTATATCATAGGTGGCTACGTCCCATAATCGACCGGT
GCAGTCGGGGAGTCTAGGTGGCCCCTCGACGGCGGAGATCGCCGGGCCGC
GCCTCGGTCACCAGATCGCGCCTCCCCAGATCGCGCGGGCAACCACTGCA
GGAATACCCCGGCGGCAACGCTGCCTTGTCTATGGGAGATGTCTTTGAGC
GGCGCGGCGTACGACCACGGACCCGCGTCGCCCAGACTGCTATCTCCCGG
AGAGCAGGCGAGATCA
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