EY728744

Overview
NameEY728744
Unique NameEY728744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728744 vs. ExPASy Swiss-Prot
Match: Y5270_ARATH (B3 domain-containing protein At5g42700 OS=Arabidopsis thaliana GN=At5g42700 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.423e-11
Identity = 35/103 (33.98%), Postives = 61/103 (59.22%), Query Frame = 3
Query:  318 RNRAMIDDLYDHAKVSSPVI*RA*EVRANLSPIYPSFWTAMVKSNVSHGFWLHLLMRFCKFTMPKIDTVYIVDNDSGEDYKINYISQRTPLSGGWQAFLMLTN 626
            + R +++ +Y   ++    I RA + +  L   YPSF  +M++S+VS GFWL L ++FCK  +   D V  + ++ GE+Y+  Y++++  LSGGW  F +  N
Sbjct:   74 KKRDLLNRVYVSEEIRDEAISRANKFQDELGSGYPSFVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEEYETIYLARKNGLSGGWMGFAVAHN 176          
BLAST of EY728744 vs. ExPASy Swiss-Prot
Match: Y3918_ARATH (B3 domain-containing protein At3g19184 OS=Arabidopsis thaliana GN=At3g19184 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11
Identity = 34/101 (33.66%), Postives = 59/101 (58.42%), Query Frame = 3
Query:  309 KSIRNRAMIDDLYDHAKVSSPVI*RA*EVRANLSPIYPSFWTAMVKSNVSHGFWLHLLMRFCKFTMPKIDTVYIVDNDSGEDYKINYISQRTPLSGGWQAF 611
            +S R R +++ +Y           RA +++++L   Y SF   M++S+V+ GFWL L + FCK  MPK D +  + ++  E+ +  Y++Q+  LSGGW+ F
Sbjct:   91 RSSRRRDLLNRVYASDDARMYAFDRAEKLQSSLDSEYASFTKPMLQSHVTGGFWLGLPLPFCKAHMPKRDVIMTLVDEEEEESQAKYLAQKNGLSGGWRGF 191          
The following BLAST results are available for this feature:
BLAST of EY728744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y5270_ARATH2.423e-1133.98B3 domain-containing protein At5g42700 OS=Arabidop... [more]
Y3918_ARATH7.049e-1133.66B3 domain-containing protein At3g19184 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-A03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728744 ID=EY728744; Name=EY728744; organism=Citrus sinensis; type=EST; length=871bp
CCACGCGTCCGACTAAATCACTTTCGTAGCTTAAACCATTATTATTTACA
AGAAACTATAATCGGAGCCGTTGCTGTGGGAACTCACGCACAGGACTTCT
CGCTGATACGCTTTCAGAACTGAAATCCTCCCCGCTTTTGTTGTAATGGA
ATGATCAAGCAGAGCCAGAAGCCCCTCTTCTCCAATCCACCATCATTAAG
AAAAAGAAGACATCTGACAGCGTTATGAAGCTGACCCATGTCAGTGAGAA
GCCTCTGGATCCGGATTCCGCACCTGAACTTGGAGCATTTGATAGTTCGA
AGGAGTCTAAAAGTATACGGAACAGAGCTATGATTGATGATCTCTATGAT
CATGCCAAAGTTAGTTCGCCGGTTATATAGCGAGCATAAGAGGTTCGAGC
GAACTTATCACCTATCTACCCAAGCTTTTGGACAGCTATGGTTAAGTCAA
ATGTTAGTCATGGATTTTGGCTGCATCTTCTCATGCGATTCTGCAAATTC
ACCATGCCAAAGATTGATACAGTATATATTGTGGACAACGATAGTGGGGA
AGACTACAAAATAAATTATATTTCCCAAAGGACACCATTGAGTGGTGGAT
GGCAAGCTTTTCTGATGCTGACCAATTATATGAGGGCGATGGTTTAGTTT
TCCCTTGTGGTTGACCCTCCAGGCGTACATATTGATAGCAATGCGTTTTG
GAATGTGCGTGTTGATCCAAGCCCGAATTCTGCTCCGATGCTTGATGACT
TGATCTCTTCCCCTGGGCTCCTCTCTCTTACCCTCTTGCCAAAGCGAAGG
GGGTCTCGTTTTCGTGTTCCCTGCNGTTCCGTCCGGCGCCGTTGCGTCTC
TCCCTTCTCTTGCGCTGTGGT
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