EY728743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728743 vs. ExPASy Swiss-Prot
Match: RL6_MESCR (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum GN=RPL6 PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 5.755e-80 Identity = 155/232 (66.81%), Postives = 171/232 (73.71%), Query Frame = 2 Query: 59 APKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKAKNGGVFPRHXXXXXXXXXXXXXXXFYPADDV*KTLVNKRKPKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTTVDISGVNVDESDDKYXAKEVERKKKTGXXXXXXXXXXXXXXXXXXXXDGSESC*CTLVKAIEAVXNLKACLGARFSLQAGVKPHELGF 754 A KQ KP VSRNPEL+RGIGK+SRSKMYHKRGLWAIKAKNGGVFP+H FYPADDV K L+NKRKPKPTKLRASITPGTVLIIL GRFKGKRVVFLKQL SGLLLV+GPFK+NGVPLRRVNQ+YVI TST VDISGVNV++ DDKY K+ E+K K G D ++ L+KAIE V LKA LGARFSL+AG+KPHEL F Sbjct: 3 AAKQRKPHVSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234
BLAST of EY728743 vs. ExPASy Swiss-Prot
Match: RL63_ARATH (60S ribosomal protein L6-3 OS=Arabidopsis thaliana GN=RPL6C PE=1 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 5.574e-75 Identity = 148/233 (63.52%), Postives = 166/233 (71.24%), Query Frame = 2 Query: 56 MAPKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKAKNGGVFPRHXXXXXXXXXXXXXXXFYPADDV*KTLVNKRKPKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTTVDISGVNVDESDDKYXAKEVERKKKTGXXXXXXXXXXXXXXXXXXXXDGSESC*CTLVKAIEAVXNLKACLGARFSLQAGVKPHELGF 754 M KQ P+V+RNP+LIRG+GK+SRS+MYHKRGLWAIKAKNGGVFPRH FYPA+DV K L N+R KPTKLRASITPGTVLIIL GRFKGKRVVFLKQL SGLLLV+GPFKINGVPLRRVNQ+YVIGTST VDISGV +D+ DDKY K E+KKK D ++ L+KAIEAV LK LGARFSL+ G+KPHEL F Sbjct: 1 MPAKQRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFYPAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233
BLAST of EY728743 vs. ExPASy Swiss-Prot
Match: RL61_ARATH (60S ribosomal protein L6-1 OS=Arabidopsis thaliana GN=RPL6A PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 7.280e-75 Identity = 144/226 (63.72%), Postives = 165/226 (73.01%), Query Frame = 2 Query: 77 PRVSRNPELIRGIGKFSRSKMYHKRGLWAIKAKNGGVFPRHXXXXXXXXXXXXXXXFYPADDV*KTLVNKRKPKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTTVDISGVNVDESDDKYXAKEVERKKKTGXXXXXXXXXXXXXXXXXXXXDGSESC*CTLVKAIEAVXNLKACLGARFSLQAGVKPHELGF 754 P+V+RNP+LIRG+GK+SRS+MYHKRGLWAIKAKNGGVFPRH FYPA+DV K LVN+RKPKPTKL+ASITPGTVLIIL GRFKGKRVVFLKQL SGLLLV+GPFKINGVPLRRVNQ+YVIGTST +DISGVN ++ DDKY K E+KKK + ++ L+K+IEAV LK LGARFSL G+KPHEL F Sbjct: 8 PKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAKFYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233
BLAST of EY728743 vs. ExPASy Swiss-Prot
Match: RL62_ARATH (60S ribosomal protein L6-2 OS=Arabidopsis thaliana GN=RPL6B PE=2 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.793e-73 Identity = 146/233 (62.66%), Postives = 164/233 (70.39%), Query Frame = 2 Query: 56 MAPKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKAKNGGVFPRHXXXXXXXXXXXXXXXFYPADDV*KTLVNKRKPKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTTVDISGVNVDESDDKYXAKEVERKKKTGXXXXXXXXXXXXXXXXXXXXDGSESC*CTLVKAIEAVXNLKACLGARFSLQAGVKPHELGF 754 M KQ +V+RNP+LIRG+GK+SRS+MYHKRGLWAIKAKNGGVFPRH FYPA+DV K L N+R KP KLRASITPGTVLIIL GRFKGKRVVFLKQL SGLLLV+GPFKINGVPLRRVNQ+YVIGTST VDISGV +D+ DDKY K E+KKK D ++ L+KAIEAV LK LGARFSL+ G+KPHEL F Sbjct: 1 MPAKQRTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFYPAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233
BLAST of EY728743 vs. ExPASy Swiss-Prot
Match: RL6_PIG (60S ribosomal protein L6 OS=Sus scrofa GN=RPL6 PE=2 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 1.938e-35 Identity = 102/262 (38.93%), Postives = 136/262 (51.91%), Query Frame = 2 Query: 65 KQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKA--------------------------KNGGVFPRHXXXXXXXXXXXXXXXFYPADDV*KTLVNKRKPKP-----TKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTTVDISGVNVDES-DDKYXAKEVERKKKTGXXXXXXXXXXXXXXXXXXXXDGSESC*CTLVKAIEAVXNLKACLGARFSLQAGVKPHELGF 754 K+GKP SRNP L+RGIG++SRS MY ++ L+ K KNGG +YP +DV + L++ K KP KLRASITPGT+LIILTGR +GKRV+FLKQL SGLLLV+GP +N VPLRR +Q +VI TST +DISGV + E D Y K+ RK + D ++ +++ I+AV L+ L + F+L G+ PH+L F Sbjct: 34 KKGKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSKHVRKLRASITPGTILIILTGRHRGKRVIFLKQLSSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKKKLRKPRHQEGEIFDTEKEKYEISEQRKVD-QKAVDSQILRRIKAVPQLQGYLRSVFALTNGIYPHKLVF 284
BLAST of EY728743 vs. ExPASy Swiss-Prot
Match: RL6_BOVIN (60S ribosomal protein L6 OS=Bos taurus GN=RPL6 PE=2 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 4.317e-35 Identity = 102/262 (38.93%), Postives = 136/262 (51.91%), Query Frame = 2 Query: 65 KQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKA--------------------------KNGGVFPRHXXXXXXXXXXXXXXXFYPADDV*KTLVNKRKPKP-----TKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTTVDISGVNVDES-DDKYXAKEVERKKKTGXXXXXXXXXXXXXXXXXXXXDGSESC*CTLVKAIEAVXNLKACLGARFSLQAGVKPHELGF 754 K+GKP SRNP L+RGIG++SRS MY ++ L+ K KNGG +YP +DV + L++ K KP KLRASITPGT+LIILTGR +GKRVVFLKQL SGLLLV+GP +N VPLRR +Q +VI TST +DISGV + E D Y K+ RK + D ++ +++ I+AV L+ L + F+L G+ PH++ F Sbjct: 37 KKGKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSKHVRKLRASITPGTILIILTGRHRGKRVVFLKQLGSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDTYFKKKKLRKPRHQEGEIFDTEREKYEITEQRKVD-QKAVDSQILRRIKAVPQLQGYLRSVFALTNGIYPHKVVF 287
BLAST of EY728743 vs. ExPASy Swiss-Prot
Match: RL6_CHILA (60S ribosomal protein L6 OS=Chinchilla lanigera GN=RPL6 PE=2 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 1.641e-34 Identity = 103/273 (37.73%), Postives = 139/273 (50.92%), Query Frame = 2 Query: 32 AQQKRVASMAPKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKA--------------------------KNGGVFPRHXXXXXXXXXXXXXXXFYPADDV*KTLVNKRKPKP-----TKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTTVDISGVNVDES-DDKYXAKEVERKKKTGXXXXXXXXXXXXXXXXXXXXDGSESC*CTLVKAIEAVXNLKACLGARFSLQAGVKPHELGF 754 A++ V + K+G+P SRNP L+RGIG++SRS MY ++ L+ K KNGG +YP +DV + L++ K KP KLRASITPGTVLIILTGR +GKRVVFLKQL SGLLLV+GP +N VPLRR +Q +VI TST +DIS V + + D Y K+ RK + D ++ ++ I+AV L+ L + F+L G+ PH+L F Sbjct: 27 AKKANVKAKKSKKGQPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYTAAKSKVEKKKKEKVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRKLRASITPGTVLIILTGRHRGKRVVFLKQLASGLLLVTGPLNLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQEGEIFDTEKERYQISEQRKVD-QKAVDSQILPKIKAVPQLRGYLRSVFALTNGIYPHKLVF 288
BLAST of EY728743 vs. ExPASy Swiss-Prot
Match: RL6_HUMAN (60S ribosomal protein L6 OS=Homo sapiens GN=RPL6 PE=1 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 2.798e-34 Identity = 100/263 (38.02%), Postives = 135/263 (51.33%), Query Frame = 2 Query: 62 PKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKA--------------------------KNGGVFPRHXXXXXXXXXXXXXXXFYPADDV*KTLVNKRKPKP-----TKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTTVDISGVNVDES-DDKYXAKEVERKKKTGXXXXXXXXXXXXXXXXXXXXDGSESC*CTLVKAIEAVXNLKACLGARFSLQAGVKPHELGF 754 PK+GKP SRNP L+RGIG++SRS MY ++ ++ K KNGG +YP +DV + L++ K KP KLRASITPGT+LIILTGR +GKRVVFLKQL SGLLLV+GP +N VPLRR +Q +VI TST +DIS V + + D Y K+ RK + D ++ ++ I+A+ L+ L + F+L G+ PH+L F Sbjct: 37 PKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQEGEIFDTEKEKYEITEQRKID-QKAVDSQILPKIKAIPQLQGYLRSVFALTNGIYPHKLVF 288
BLAST of EY728743 vs. ExPASy Swiss-Prot
Match: RL6_MOUSE (60S ribosomal protein L6 OS=Mus musculus GN=Rpl6 PE=1 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 4.773e-34 Identity = 103/264 (39.02%), Postives = 135/264 (51.14%), Query Frame = 2 Query: 62 PKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKA---------------------------KNGGVFPRHXXXXXXXXXXXXXXXFYPADDV*KTLVNKRKPKP-----TKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTTVDISGVNVDES-DDKYXAKEVERKKKTGXXXXXXXXXXXXXXXXXXXXDGSESC*CTLVKAIEAVXNLKACLGARFSLQAGVKPHELGF 754 PK+ KP SRNP L+RGIG++SRS MY ++ L+ K KNGG +YP +DV + L++ K KP +LR+SITPGTVLIILTGR +GKRVVFLKQL SGLLLV+GP IN VPLRR +Q +VI TST VDIS V + + D Y K+ RK + D ++ ++ I+AV L+ L ++FSL G+ PH+L F Sbjct: 44 PKKAKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKTKVEKKKKKEKVLATVTKTVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLDSGLLLVTGPLVINRVPLRRTHQKFVIATSTKVDISDVKIPKHLTDAYFKKKQLRKPRHQEGEIFDTEKEKYEITEQRKAD-QKAVDLQILPKIKAVPQLQGYLRSQFSLTNGMYPHKLVF 296
BLAST of EY728743 vs. ExPASy Swiss-Prot
Match: RL6_RAT (60S ribosomal protein L6 OS=Rattus norvegicus GN=Rpl6 PE=1 SV=5) HSP 1 Score: 141.739 bits (356), Expect = 5.278e-33 Identity = 106/285 (37.19%), Postives = 143/285 (50.18%), Query Frame = 2 Query: 5 ASAKLSFTEAQQKRVASMAPK--QGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKA---------------------------KNGGVFPRHXXXXXXXXXXXXXXXFYPADDV*KTLVNKRKPKP-----TKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTTVDISGVNVDES-DDKYXAKEVERKKKTGXXXXXXXXXXXXXXXXXXXXDGSESC*CTLVKAIEAVXNLKACLGARFSLQAGVKPHELGF 754 A+A + K+ +S A K + KP SRNP L+RGIG++SRS MY ++ L+ K KNGG +YP +DV + L++ K KP +LR+SITPGTVLIILTGR +GKRVVFLKQL SGLLLV+GP +N VPLRR +Q +VI TST VDIS V + + D Y K+ RK + D ++ ++ I+AV L+ L ++FSL G+ PH+L F Sbjct: 25 ATAPRALPAGAVKKSSSKAKKLRKSKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKTKVEKKKKKEKVLATVTKTVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLRRTHQKFVIATSTKVDISKVKIPKHLTDAYFKKKPLRKPRHQEGEIFDTEKEKYEITEQRKAD-QKAVDSQILPKIKAVPQLQGYLRSQFSLTNGMYPHKLVF 298 The following BLAST results are available for this feature:
BLAST of EY728743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728743 ID=EY728743; Name=EY728743; organism=Citrus sinensis; type=EST; length=897bpback to top |