EY728742

Overview
NameEY728742
Unique NameEY728742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728742 vs. ExPASy Swiss-Prot
Match: PANE_PSEAE (Probable 2-dehydropantoate 2-reductase OS=Pseudomonas aeruginosa GN=panE PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.930e-46
Identity = 94/177 (53.11%), Postives = 114/177 (64.41%), Query Frame = 1 
Query:    1 TWHVLGAGSLGTXXXXXXXXXXXXXXXXXXDHARLANYQNGKGLTLVQHGVAHTYPVVGETSDSPGAIHRLLVACKAYKAQEAVAQLEHRLAPHAELILLQKGLGSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLGDASHPNPPLWLGDLQTAGVRHAGRTGSLTR 531
            TWH+LGAGSLG+                  D  RL  YQ   GL+LV+ G A  YP+  ET D    I RLL+ACKAY A+EA + + HRLA +AEL+LLQ GLGSQ AVAA+LP++RC+FASSTEGAFR+ D+RVVFAG G+TWLGD    N P WL  L  AG+ H+     L R
Sbjct:    2 TWHILGAGSLGSLWAARLGRAGLPVRLILRDRQRLRRYQQAGGLSLVEDGQASLYPIAAETPDGGQPIQRLLLACKAYDAEEAASSVAHRLAGNAELLLLQNGLGSQQAVAARLPRSRCLFASSTEGAFRDGDFRVVFAGRGHTWLGDPRDTNAPAWLTQLSQAGIPHSWSDDILER 178
The following BLAST results are available for this feature:
BLAST of EY728742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PANE_PSEAE1.930e-4653.11Probable 2-dehydropantoate 2-reductase OS=Pseudomo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-A01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728742 ID=EY728742; Name=EY728742; organism=Citrus sinensis; type=EST; length=912bp
ACCTGGCATGTCCTCGGCGCTGGCAGCCTCGGAACATTGTGGGCTGCCCG
CCTGGCCCGCGCCCGGTTGCCGGTGCGCCTGATCCTGCGGGACCACGCGC
GGCTGGCGAACTATCAGAACGGCAAGGGCCTGACCCTGGTCCAACACGGG
GTGGCTCACACCTATCCAGTCGTCGGCGAAACATCCGACAGCCCTGGGGC
GATTCATCGCCTGCTGGTGGCGTGCAAAGCCTACAAAGCCCAAGAAGCCG
TCGCACAACTTGAACATCGTCTGGCACCCCACGCCGAGCTGATCCTGCTG
CAAAAAGGGCTGGGCAGCCAGGATGCAGTCGCCGCCCAACTGCCCCAAGC
CCGCTGCATCTTCGCCTCCAGCACCGAAGGGGCGTTTCGCGAAAGCGACT
GGCGGGTCGTATTTGCCGGCCATGGGTACACCTGGCTGGGAGATGCGAGC
CACCCTAACCCGCCTCTTTGGCTGGGTGACCTGCAAACCGCCGGCGTGCG
CCATGCAGGGAGGACCGGTAGCCTCACCCGCCCTGTGGTGCAGAACTGGG
GCTCGCTCTGGTCGGGAGAGCCGTTGAGTGTGCTGTGCTGCATGGCCGCA
GTGGGGAGGGGGAGGCCCATCAGTGGGGAGTCGGGCGGCCGGGGCTCCGG
CCTCCCCGCAGGCTGGGGTGGGGGCGTGGGGACCGCGCCNCCGCGCGTCT
CGTGTTGGGTCGCGCGGACGGGCGGAGGAGCGGGGGCGGGCCCGAGCGAT
GCTCGTTCGCTACGTGGCCGCGTCGCAGTGGTCCGGTGCGCCGGGGGTGC
GGAGGGGCGTTGCGTGGGCGACATTGCCGCGGTGCCGTCTGACGGGTATG
AGGACGGTCGACCAGCCTCCGCGCCTCGGTCACTGGTCCGTCGGGCCGGG
GCTGGCGCTAGG
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