EY728736

Overview
NameEY728736
Unique NameEY728736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728736 vs. ExPASy Swiss-Prot
Match: AAM1_RHOSH (Putative glycosidase (Fragment) OS=Rhodobacter sphaeroides GN=aam1 PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.051e-67
Identity = 119/204 (58.33%), Postives = 147/204 (72.06%), Query Frame = 3
Query:   12 GCDPSLWTELRDIVVGWVEEGVKTFRVDNPHTKPLPFWQWLISDVRGKYPEVIFLAEAFTTPAMMARLGKVGYSQSYTYFTWRNTKAXXXXXXXXXXXXPWRECFRPNFFVNTPDINPGFLHESGRAGFLIRAALATMGSGLWGMYSGFELCEAAPVPGKEEYLDSEKYEIRPRDFTAPGNIIAEIAQLNRIRRQNPALQTHXR 623
            G  P LW  LRD+V+ WVE+GVK FRVDNPHTKP PFW+W+I +V+ ++P+VIFLAEAFT P +M RLGKVGY QSY+YFTWRNTKA              R   RPNFF NTPDINP +L  SGRAGF +R ALA    G +G+Y+G+E+CEA PVPGKEEY +SEKY++R  DF  PG+I  +I  +N IRR +PA++   R
Sbjct:  434 GALPELWYALRDVVLFWVEKGVKIFRVDNPHTKPFPFWEWMIGEVQSQHPDVIFLAEAFTRPKVMKRLGKVGYGQSYSYFTWRNTKAELIDYLTELTTEECRHYMRPNFFANTPDINPVYLQHSGRAGFRVRLALAATLGGNYGLYNGYEICEATPVPGKEEYFNSEKYQLRAWDFDQPGHIQDDIRLMNHIRRTHPAMRDFTR 637          
BLAST of EY728736 vs. ExPASy Swiss-Prot
Match: PEP1A_STRCO (Putative glucanohydrolase pep1A OS=Streptomyces coelicolor GN=pep1A PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.088e-52
Identity = 108/204 (52.94%), Postives = 134/204 (65.69%), Query Frame = 3
Query:   18 DPS-LWTELRDIVVGWVEEGVKTFRVDNPHTKPLPFWQWLISDVRGKYPEVIFLAEAFTTPAMMARLGKVGYSQSYTYFTWRNTKAXXXXXXXXXXXXPWRECFRPNFFVNTPDINPGFLHESGRAGFLIRAALATMGSGLWGMYSGFELCEAAPV-PGKEEYLDSEKYEIRPRDFT---APGNIIAE-IAQLNRIRRQNPALQ 611
            DP  L TE   I+  W++ GV+ FRVDNPHTKP+ FW+ +I+D+ G  P+VIFLAEAFT PAMMA L ++G+ QSYTYFTWRNTK                   RPNFF NTPDI   +L   GR  F +RA LA   S  WG+YSG+ELCE  P+  G EEYLDSEKY+++PRD+T     G  IA  + +LN IRR+NPAL+
Sbjct:  368 DPDGLATETVRILRHWMDHGVRIFRVDNPHTKPVAFWERVIADINGTDPDVIFLAEAFTRPAMMATLAQIGFQQSYTYFTWRNTKQELTEYLTELSGEA-ASYMRPNFFANTPDILHAYLQHGGRPAFEVRAVLAATLSPTWGIYSGYELCENTPLREGSEEYLDSEKYQLKPRDWTRAAREGTTIAPLVTRLNTIRRENPALR 570          
BLAST of EY728736 vs. ExPASy Swiss-Prot
Match: PEP1B_STRCO (Putative glucanohydrolase pep1B OS=Streptomyces coelicolor GN=pep1B PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.243e-51
Identity = 107/203 (52.71%), Postives = 133/203 (65.52%), Query Frame = 3
Query:   18 DPS-LWTELRDIVVGWVEEGVKTFRVDNPHTKPLPFWQWLISDVRGKYPEVIFLAEAFTTPAMMARLGKVGYSQSYTYFTWRNTKAXXXXXXXXXXXXPWRECFRPNFFVNTPDINPGFLHESGRAGFLIRAALATMGSGLWGMYSGFELCEAAPV-PGKEEYLDSEKYEIRPRDFT---APGNIIAE-IAQLNRIRRQNPAL 608
            DP  L TE   I+  W++ GV+ FRVDNPHTKP+ FW+ +I+D+ G  P+VIFLAEAFT PAMMA L ++G+ QSYTYFTWRNTK                   RPNFF NTPDI   +L   GR  F +RA LA   S  WG+YSG+ELCE  P+  G EEYLDSEKY+++PRD+T     G  IA  + +LN IRR++PAL
Sbjct:  359 DPDGLATETVRILRHWMDHGVRIFRVDNPHTKPVAFWERVIADINGTDPDVIFLAEAFTRPAMMATLAQIGFQQSYTYFTWRNTKQELTEYLEELSGEA-AAYMRPNFFANTPDILHAYLQHGGRPAFEVRAVLAATLSPTWGIYSGYELCENTPLREGSEEYLDSEKYQLKPRDWTRAAREGTTIAPLVTRLNTIRREHPAL 560          
BLAST of EY728736 vs. ExPASy Swiss-Prot
Match: GLGE_MYCS2 (Putative glucanase glgE OS=Mycobacterium smegmatis GN=glgE PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.930e-45
Identity = 110/245 (44.90%), Postives = 140/245 (57.14%), Query Frame = 3
Query:   18 DPS-LWTELRDIVVGWVEEGVKTFRVDNPHTKPLPFWQWLISDVRGKYPEVIFLAEAFTTPAMMARLGKVGYSQSYTYFTWRNTKAXXXXXXXXXXXXPWRECFRPNFFVNTPDINPGFLHESGRAGFLIRAALATMGSGLWGMYSGFELCEAAPV-PGKEEYLDSEKYEIRPRDF---TAPGNIIAE-IAQLNRIRRQNPALQT-------HXRAEALQRVERQHPVLRQTQRRRXALYPGGRE 713
            DP  L+ E+  +V  W+  GVK FRVDNPHTKP  FW WLI++V+ + P+++FL+EAFT PA +  L K+G++QSYTYFTWR  K              + +  RPN +VNTPDI    L   G   F IRA LA+  S  WG+YSG+EL E   V  G EEYLDSEKYE+RPRDF    A G  +   + +LN IRR +PAL+        H   +AL    +  PV   T      L P G E
Sbjct:  388 DPDGLFHEVLRVVKFWISHGVKVFRVDNPHTKPPNFWAWLIAEVKNEDPDILFLSEAFTRPARLYGLAKLGFTQSYTYFTWRTAK--WELTEFGEEIAKYADHARPNLWVNTPDILHESLQHGGPGMFAIRAVLASTMSSSWGVYSGYELFEHRSVREGSEEYLDSEKYELRPRDFDGALARGESLEPFLTRLNEIRRLHPALRQLRTIKFHHLDNDALLAYSKFDPVTGDTVLVVVTLNPFGPE 630          
BLAST of EY728736 vs. ExPASy Swiss-Prot
Match: GLGE_MYCTU (Putative glucanase glgE OS=Mycobacterium tuberculosis GN=glgE PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.133e-44
Identity = 102/204 (50.00%), Postives = 123/204 (60.29%), Query Frame = 3
Query:   18 DPS-LWTELRDIVVGWVEEGVKTFRVDNPHTKPLPFWQWLISDVRGKYPEVIFLAEAFTTPAMMARLGKVGYSQSYTYFTWRNTKAXXXXXXXXXXXXPWRECFRPNFFVNTPDINPGFLHESGRAGFLIRAALATMGSGLWGMYSGFELCEAAPV-PGKEEYLDSEKYEIRPRDFTAP----GNIIAEIAQLNRIRRQNPALQ 611
            DP  L+ E+  +V  WV  GVK FRVDNPHTKP  FW WLI+ V+   P+V+FL+EAFT PA    L K+G++QSY+YFTWR TK                +  RPN FVNTPDI    L  +G   F IRA LA   S  WGMY G+EL E   V  G EEYLDSEKYE+RPRDF +      ++   I +LN IRR +PA Q
Sbjct:  392 DPEGLYDEVLRVVQHWVNHGVKFFRVDNPHTKPPNFWAWLIAQVKTVDPDVLFLSEAFTPPARQYGLAKLGFTQSYSYFTWRTTK--WELTEFGNQIAELADYRRPNLFVNTPDILHAVLQHNGPGMFAIRAVLAATMSPAWGMYCGYELFEHRAVREGSEEYLDSEKYELRPRDFASALDQGRSLQPFITRLNIIRRLHPAFQ 593          
BLAST of EY728736 vs. ExPASy Swiss-Prot
Match: GLGE_MYCBO (Putative glucanase glgE OS=Mycobacterium bovis GN=glgE PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.133e-44
Identity = 102/204 (50.00%), Postives = 123/204 (60.29%), Query Frame = 3
Query:   18 DPS-LWTELRDIVVGWVEEGVKTFRVDNPHTKPLPFWQWLISDVRGKYPEVIFLAEAFTTPAMMARLGKVGYSQSYTYFTWRNTKAXXXXXXXXXXXXPWRECFRPNFFVNTPDINPGFLHESGRAGFLIRAALATMGSGLWGMYSGFELCEAAPV-PGKEEYLDSEKYEIRPRDFTAP----GNIIAEIAQLNRIRRQNPALQ 611
            DP  L+ E+  +V  WV  GVK FRVDNPHTKP  FW WLI+ V+   P+V+FL+EAFT PA    L K+G++QSY+YFTWR TK                +  RPN FVNTPDI    L  +G   F IRA LA   S  WGMY G+EL E   V  G EEYLDSEKYE+RPRDF +      ++   I +LN IRR +PA Q
Sbjct:  392 DPEGLYDEVLRVVQHWVNHGVKFFRVDNPHTKPPNFWAWLIAQVKTVDPDVLFLSEAFTPPARQYGLAKLGFTQSYSYFTWRTTK--WELTEFGNQIAELADYRRPNLFVNTPDILHAVLQHNGPGMFAIRAVLAATMSPAWGMYCGYELFEHRAVREGSEEYLDSEKYELRPRDFASALDQGRSLQPFITRLNIIRRLHPAFQ 593          
The following BLAST results are available for this feature:
BLAST of EY728736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
AAM1_RHOSH1.051e-6758.33Putative glycosidase (Fragment) OS=Rhodobacter sph... [more]
PEP1A_STRCO8.088e-5252.94Putative glucanohydrolase pep1A OS=Streptomyces co... [more]
PEP1B_STRCO5.243e-5152.71Putative glucanohydrolase pep1B OS=Streptomyces co... [more]
GLGE_MYCS21.930e-4544.90Putative glucanase glgE OS=Mycobacterium smegmatis... [more]
GLGE_MYCTU2.133e-4450.00Putative glucanase glgE OS=Mycobacterium tuberculo... [more]
GLGE_MYCBO2.133e-4450.00Putative glucanase glgE OS=Mycobacterium bovis GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-H07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728736 ID=EY728736; Name=EY728736; organism=Citrus sinensis; type=EST; length=861bp
TTCTACGCGGCGGATGCGATCCCAGCCTGTGGACCGAGTTGCGTGACATC
GTGGTCGGTTGGGTGGAAGAGGGCGTGAAGACCTTTCGCGTGGACAACCC
CCACACCAAGCCGCTGCCGTTCTGGCAATGGCTGATCAGCGATGTGCGCG
GCAAATACCCGGAAGTGATCTTCCTCGCCGAAGCCTTCACCACCCCGGCG
ATGATGGCGCGCCTGGGCAAGGTCGGTTACTCCCAGAGCTACACCTACTT
CACCTGGCGCAACACCAAGGCCGAGTTGAGCGAGTACCTGAGCGAGCTGA
ACGAGTCGCCATGGCGCGAGTGCTTTCGGCCGAACTTTTTCGTCAATACG
CCGGACATCAACCCGGGTTTCCTGCATGAATCCGGCCGCGCGGGCTTCTT
GATCCGTGCCGCGCTGGCCACCATGGGCTCAGGCTTGTGGGGCATGTATT
CCGGCTTTGAACTGTGCGAAGCGGCCCCGGTACCGGGCAAGGAAGAGTAC
CTGGACTCGGAGAAGTACGAGATCCGCCCGCGAGACTTTACGGCGCCGGG
CAACATCATTGCCGAGATCGCTCAGCTCAATCGCATTCGCCGGCAAAACC
CGGCCTTGCAGACGCATNCTCGGGCTGAAGCTCTACAACGCGTGGAACGA
CAACATCCTGTACTTCGGCAAACGCAGCGAAGACGGCNAGCACTTTATCC
TGGTGGCCGTGAGTCTCGACCCGTTCACGCCCANGAGGCAATTTCCAGTT
GCGTTGTGGGGAGATGGGCCACCGGACGATGCTCAAACCCGGGCGAAGAT
TGATGACCGGCCCCGCTGGACTGGTACGGCAGACCCATGGATCCGATCGA
ACCGTGCATCA
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