EY728717

Overview
NameEY728717
Unique NameEY728717
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728717 vs. ExPASy Swiss-Prot
Match: MOSC1_XENLA (MOSC domain-containing protein 1, mitochondrial OS=Xenopus laevis GN=mosc1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 1 
Query:  271 SLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGV-AGPEPSETLRQIR-SDKVLR 522
            S++ALN  L++P+ +  FRP I+  GCE F+ED W  +R+     + V  C RC + T+N ++GV    EP +TLR  R SD  L+
Sbjct:  224 SMEALNSRLEQPVSLANFRPCIVASGCEAFAEDDWDDVRLGATRLKRVMACGRCVLTTVNPNSGVITRKEPLDTLRTFRQSDSSLK 309
[Close]
BLAST of EY728717 vs. ExPASy Swiss-Prot
Match: MOSC2_BOVIN (MOSC domain-containing protein 2, mitochondrial OS=Bos taurus GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11
Identity = 34/79 (43.04%), Postives = 46/79 (58.23%), Query Frame = 1 
Query:  271 SLDALNKLLKEPIPINRFRPNILVDGCEPFSEDLWMGIRINNCTFQGVKLCDRCKVPTINQDTGVAG-PEPSETLRQIR 504
            SL  LN  +++ + IN FRPNI+V GC  F ED W  + I N   + +  C RC + T++ DTGV    EP ETL+  R
Sbjct:  219 SLADLNTRMEKKVKINNFRPNIVVTGCSAFEEDTWDELLIGNVEMKKILACPRCIMTTVDPDTGVIDRKEPLETLKSYR 297
The following BLAST results are available for this feature:
BLAST of EY728717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MOSC1_XENLA7.416e-1140.70MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC2_BOVIN9.685e-1143.04MOSC domain-containing protein 2, mitochondrial OS... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-F07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728717 ID=EY728717; Name=EY728717; organism=Citrus sinensis; type=EST; length=894bp
CACGCGTCCGGAAATGTCCAATTAACCGTTTTCGACCAAACATCCTTGTT
GATGGTTGTGAACCGTTTTCTGAGGACTTATGGATGGGCATCCGAATAAA
CAATTGCACATTTCAAGGTGTTAAGCTGTGTGACCGCTGTAAGGTGCCAA
CTATCAATCAAGACACTGGTGTTGCTGGTCCCGAACCAAGTGAAACACTA
AGGCAAATTAGGTCAGATAAAGTTTTGCGTCCAAATCAAAAACAGCAGGG
AAAGATATACTTTGGGCAGATCTTTGGATGCACTTAATAAGCTTCTCAAG
GAGCCTATTCCAATTAACCGTTTTCGACCAAACATCCTTGTTGATGGTTG
TGAACCGTTTTCTGAGGACTTATGGATGGGCATCCGAATAAACAATTGCA
CATTTCAAGGTGTTAAGCTGTGTGACCGCTGTAAGGTGCCAACTATCAAT
CAAGACACTGGTGTTGCTGGTCCCGAACCAAGTGAAACACTAAGGCAAAT
TAGGTCAGATAAAGTTTTGCGTCCAAATCAAAAACAGCAGCTTGAGCTCT
ATTGAATATTTGTTAGTAATGCTAATGCTGTTGTTGGGGCCAATAAATTA
NACTCTGTTGTGTGTGTATCATTGTCTANTGGAATTAAAAACTGGTTTGT
TGCTTGCTATGCCACAGCAAGGTGCCATTTCCNAAGAAAAAAAAAAAAAA
AAAGGCGGCGCTCTAAAGGAATCAACTTACTTACCCTTGCATGCAAACCT
AACCCTCCTCTATGATGTCACTAAATCCAATCACGGGCCTCCNTTTTAAA
ACTTGGNNANNNGGAAAACCNNNCNNTACCCACTTATCGCTTNCAAAAAT
CCCCCTTCCCAACTGGTTAATAACAAAAAGGCCCNCCGATTGCC
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