EY728701
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728701 vs. ExPASy Swiss-Prot
Match: WDTC1_HUMAN (WD and tetratricopeptide repeats protein 1 OS=Homo sapiens GN=WDTC1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.612e-15 Identity = 63/188 (33.51%), Postives = 88/188 (46.81%), Query Frame = 1 Query: 79 HTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLR--CGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSPPPCVNYFC-------------------PMHLSEHGR--SSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNH 573 HT RVK++A P+ WSA+EDG +RQ+D R+ S H E +L+DL CG Q + K ++ + L VG S F RLYD RM+ K+ SP V+ FC P+ L ++ L T+VTFSPNG E+L++ GE VYL D+ + Sbjct: 133 HTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRE-------NSKHSE---VLIDLTEYCG----------QLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQ-SPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTY 299
BLAST of EY728701 vs. ExPASy Swiss-Prot
Match: WDTC1_MOUSE (WD and tetratricopeptide repeats protein 1 OS=Mus musculus GN=Wdtc1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.058e-14 Identity = 62/188 (32.98%), Postives = 86/188 (45.74%), Query Frame = 1 Query: 79 HTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLR--CGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSPPPCVNYFC-------------------PMHLSEHGR--SSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNH 573 HT RVK++A P+ WSA+EDG +RQ+D R+ S H E +L+DL CG + K ++ + L VG S F RLYD RM+ R SP V+ FC P+ L ++ L T+VTFSPNG E+L++ GE VYL D+ + Sbjct: 133 HTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRE-------NSKHSE---VLIDLTEYCG----------PMVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRK-SMRQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNSRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTY 299
BLAST of EY728701 vs. ExPASy Swiss-Prot
Match: DCAF6_MOUSE (DDB1- and CUL4-associated factor 6 OS=Mus musculus GN=Dcaf6 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.862e-12 Identity = 53/177 (29.94%), Postives = 82/177 (46.33%), Query Frame = 1 Query: 70 YQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR 594 + CH ++ +P+ S EDGT+R D R +SC + ++C++ IL++ R A PP P+ L VG SD+ R+YDRRML T V F P HLS S +T + +S +G+E+L+SYS +++YL D R ++ Sbjct: 137 FTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPV--------------PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLSN---KSCRVTSLCYSEDGQEILVSYSSDYIYLFDPKDDTARELK 291
BLAST of EY728701 vs. ExPASy Swiss-Prot
Match: DCAF6_PONAB (DDB1- and CUL4-associated factor 6 OS=Pongo abelii GN=DCAF6 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 52/177 (29.38%), Postives = 82/177 (46.33%), Query Frame = 1 Query: 70 YQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR 594 + CH ++ +P+ S EDGT+R D R +SC + ++C++ IL++ R A PP P+ L VG SD+ R+YDRRML T V F P HL+ S +T + +S +G+E+L+SYS +++YL D R ++ Sbjct: 137 FTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPI--------------PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNN---KSCRVTSLCYSEDGQEILVSYSSDYIYLFDPKDDTARELK 291
BLAST of EY728701 vs. ExPASy Swiss-Prot
Match: DCAF6_HUMAN (DDB1- and CUL4-associated factor 6 OS=Homo sapiens GN=DCAF6 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 52/177 (29.38%), Postives = 82/177 (46.33%), Query Frame = 1 Query: 70 YQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR 594 + CH ++ +P+ S EDGT+R D R +SC + ++C++ IL++ R A PP P+ L VG SD+ R+YDRRML T V F P HL+ S +T + +S +G+E+L+SYS +++YL D R ++ Sbjct: 137 FTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPI--------------PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNN---KSCRVTSLCYSEDGQEILVSYSSDYIYLFDPKDDTARELK 291 The following BLAST results are available for this feature:
BLAST of EY728701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728701 ID=EY728701; Name=EY728701; organism=Citrus sinensis; type=EST; length=868bpback to top |