EY728651

Overview
NameEY728651
Unique NameEY728651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728651 vs. ExPASy Swiss-Prot
Match: S35A4_XENTR (Probable UDP-sugar transporter protein SLC35A4 OS=Xenopus tropicalis GN=slc35a4 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.058e-12
Identity = 58/227 (25.55%), Postives = 103/227 (45.37%), Query Frame = 1
Query:  103 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSIL-LWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXXXXXXXXSTLQWMAI-VLLXVGTTTSQVKGCVRSFMRLS----ICSTNPRNICWEFYLLVYQHXQVSTQSFLMKKNNDSLYWQNVQLYTFGAIFNMSXLLLDDLXGRFXKG 765
            W  +  L   +  S   L  L + NG   +  + V  L E+ K V+S +  L ++W+   S K +  W     + +P+++Y  +NN+      ++D S++Q++ NLKIV+T +          S  +W+++ +LL  G   S   G ++   ++S    +  T P  +    Y L+     V T+   +K     L  QN+ LY+FG I N++  L       F  G
Sbjct:   25 WGLMLVLSVTIYGSHAPLIYLCKVNGEIPFSSSAVVLLIELSKFVISLVFFLIQDWK---SLKASVSWHLAAPYAVPAVLYGANNNLVVYIQHFMDPSSFQVLSNLKIVSTAVLYSLFLRQRLSVRRWLSVFLLLAAGVFYSY--GGIQDLEKVSSDTNLYVTLPGLLLMLAYCLISGLSAVYTE-MTLKTQKIPLNMQNLYLYSFGIIINLTAHLTSSKNSDFFDG 245          
BLAST of EY728651 vs. ExPASy Swiss-Prot
Match: S35A4_BOVIN (Probable UDP-sugar transporter protein SLC35A4 OS=Bos taurus GN=SLC35A4 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.994e-11
Identity = 57/222 (25.68%), Postives = 96/222 (43.24%), Query Frame = 1
Query:  100 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILL---WREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXXXXXXXXSTLQWMAIVLLXVGTTTSQVKGCVRSFMRL----SICSTNPRN--------ICWEFYLLVYQHXQVSTQSFLMKKNNDSLYWQNVQLYTFGAIFNM 720
            +W  +  L T +  +   L  L   +G   +  ++   L E+ KL++ ++ L   W+ W     P+ T  WR    F + +++Y  +NN+      Y+D STYQ++ NLKI +T +          S  Q +A++LL          G       L    S  +T+P          +    Y L+     V T+  LMK+    L  QN+ LY+FG + N+
Sbjct:   18 RWTLMLLLSTAMYGAHAPLLALCHVDGRVPFRPSSAVLLTELTKLLLCALSLLVGWQAW-----PQGTPPWRQAAPFALSALLYGANNNLVIYLQRYMDPSTYQVLSNLKIGSTALFYCLCLRHRLSARQGLALLLLMAAGACYAAGGLQDPGTTLPGPPSAAATSPMPLHITPLGLLLLILYCLISGLSSVYTE-LLMKRQRLPLALQNLFLYSFGVLLNL 233          
BLAST of EY728651 vs. ExPASy Swiss-Prot
Match: S35A4_HUMAN (Probable UDP-sugar transporter protein SLC35A4 OS=Homo sapiens GN=SLC35A4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.443e-11
Identity = 57/221 (25.79%), Postives = 95/221 (42.99%), Query Frame = 1
Query:  100 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILL---WREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXXXXXXXXSTLQWMAIVLLXVGTTTSQVKG------CVRSFMRLSICSTNPRNICWEFYLLVYQHXQVSTQS-----FLMKKNNDSLYWQNVQLYTFGAIFNM 720
            +W  +  L T +  +   L  L   +G   +  ++   L E+ KL++ +  L   W+ W     P+    WR    F + +++Y  +NN+      Y+D STYQ++ NLKI +T +          S  Q +A++LL          G       + S    +  S  P +I     LL+  +  +S  S      LMK+    L  QN+ LYTFG + N+
Sbjct:   18 RWTLMLLLSTAMYGAHAPLLALCHVDGRVPFRPSSAVLLTELTKLLLCAFSLLVGWQAW-----PQGPPPWRQAAPFALSALLYGANNNLVIYLQRYMDPSTYQVLSNLKIGSTAVLYCLCLRHRLSVRQGLALLLLMAAGACYAAGGLQVPGNTLPSPPPAAAASPMPLHITPLGLLLLILYCLISGLSSVYTELLMKRQRLPLALQNLFLYTFGVLLNL 233          
BLAST of EY728651 vs. ExPASy Swiss-Prot
Match: S35A4_PONAB (Probable UDP-sugar transporter protein SLC35A4 OS=Pongo abelii GN=SLC35A4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 57/221 (25.79%), Postives = 94/221 (42.53%), Query Frame = 1
Query:  100 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILL---WREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXXXXXXXXSTLQWMAIVLLXVGTTTSQVKGCVRSFMRL------SICSTNPRNICWEFYLLVYQHXQVSTQS-----FLMKKNNDSLYWQNVQLYTFGAIFNM 720
            +W  +  L T +  +   L  L   +G   +  ++   L E+ KL++ +  L   W+ W   + P     WR    F + +++Y  +NN+      Y+D STYQ++ NLKI +T +          S  Q +A++LL          G       L      +  S  P +I     LL+  +  +S  S      LMK+    L  QN+ LYTFG + N+
Sbjct:   18 RWTLMLLLSTAMYGAHAPLLALCHVDGRVPFRPSSAVLLTELTKLLLCAFSLLVGWQAWPQGAPP-----WRQAAPFALSALLYGANNNLVIYLQRYMDPSTYQVLSNLKIGSTAVLYCLCLRHRLSVRQGLALLLLMAAGACYAAGGLQVPGNTLPRPPPAAAASPMPLHITPLGLLLLILYCLISGLSSVYTELLMKRQQLPLALQNLFLYTFGVLLNL 233          
BLAST of EY728651 vs. ExPASy Swiss-Prot
Match: S35A4_PIG (Probable UDP-sugar transporter protein SLC35A4 OS=Sus scrofa GN=SLC35A4 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.579e-11
Identity = 55/222 (24.77%), Postives = 93/222 (41.89%), Query Frame = 1
Query:  100 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILL---WREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXXXXXXXXSTLQWMAIVLLXVGTTTSQVKG------------CVRSFMRLSICSTNPRNICWEFYLLVYQHXQVSTQSFLMKKNNDSLYWQNVQLYTFGAIFNM 720
            +W  +  L T    +   L  L   +G   +  ++   L E+ KL++ ++ L   W+ W     P  T  WR    F + +++Y  +NN+      Y+D STYQ++ NLKI +T +          S  Q +A++LL          G               +   + +  T P  +    Y L+     V T+  L+K+    L  QN+ LYTFG + N+
Sbjct:   18 RWTLMLLLSTATYGAHAPLLALCHVDGRVPFRPSSAVLLTELTKLLLCALSLLVGWQAW-----PPRTPPWRQAAPFALSALLYGANNNLVIHLQHYMDPSTYQVLSNLKIGSTALFYCLCLRRRLSARQGLALLLLMAAGACYAAGGLRDPGSPLPESPSTAASGPVPLHVTAPGLLLLLLYCLISGLSSVYTE-LLLKRQRLPLALQNLFLYTFGVLLNL 233          
BLAST of EY728651 vs. ExPASy Swiss-Prot
Match: S35A1_MOUSE (CMP-sialic acid transporter OS=Mus musculus GN=Slc35a1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.579e-11
Identity = 59/258 (22.87%), Postives = 113/258 (43.80%), Query Frame = 1
Query:  109 FVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWRE------WRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXXXXXXXXSTLQWMAIVLLXVGTTTSQVKGCVRSFMRLSICSTNP---------RNICWEFYLLVYQHXQVSTQSFLMKKNNDSLYWQNVQLYTFGAIFNMSXLLLDDLXGRFXKGPWWQRLFDGYT*HLDGCFNLGSLG 837
            +   ++T++ ++  +    +++     Y   T   + EV KL++S  LL +E      ++   S  +    + +    +PS++Y V NN+ F  L+ +D + YQ+   LKI  T +          S LQW+++ +L  G T  Q K    S +   + + NP           +C  F  + ++         ++K ++ SL+ +N+Q+Y  G +  ++   L D      KG      F GYT ++     L S+G
Sbjct:   15 YCLAVMTLVAAAYTVALRYTRTTAEELYFSTTAVCITEVIKLLISVGLLAKETGSLGRFKASLSENVLGSPKELAKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRTLSKLQWISVFMLCGGVTLVQWKPAQASKV---VVAQNPLLGFGAIAIAVLCSGFAGVYFEK--------VLKSSDTSLWVRNIQMYLSGIVVTLAGTYLSDGAEIQEKG-----FFYGYTYYVWFVIFLASVG 256          
The following BLAST results are available for this feature:
BLAST of EY728651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
S35A4_XENTR1.058e-1225.55Probable UDP-sugar transporter protein SLC35A4 OS=... [more]
S35A4_BOVIN1.994e-1125.68Probable UDP-sugar transporter protein SLC35A4 OS=... [more]
S35A4_HUMAN4.443e-1125.79Probable UDP-sugar transporter protein SLC35A4 OS=... [more]
S35A4_PONAB5.803e-1125.79Probable UDP-sugar transporter protein SLC35A4 OS=... [more]
S35A4_PIG7.579e-1124.77Probable UDP-sugar transporter protein SLC35A4 OS=... [more]
S35A1_MOUSE7.579e-1122.87CMP-sialic acid transporter OS=Mus musculus GN=Slc... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-F12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728651 ID=EY728651; Name=EY728651; organism=Citrus sinensis; type=EST; length=907bp
CCACGCGTCCGGAGAAAGCAAGCGGAATGAAAACTACGAAAGGCAGCAGC
AGTGCATGTGTTTGGTGCTCACTGATAATTCTAATTATCGAACGCGATGC
AGTGGTATTTCGTTGCTACACTTCTCACCATTCTTACAAGTTCTCAGGGG
ATTTTGACAACTCTCTCTCAAAGTAATGGAGGCTATAAGTATGATTACGC
GACCGTTCCATTTCTCGCTGAAGTTTTCAAGCTGGTGGTTTCTAGTATAC
TTCTCTGGAGAGAGTGGCGGATGCCATCTTCTCCAAAGATGACCACAGAA
TGGAGGAGCGTGCGCTTGTTTCCCATTCCTTCAATCATATATCTAGTTCA
CAATAATGTTCAATTTGCCACTCTGACTTACGTGGACACGTCCACGTATC
AAATCATGGGTAATCTGAAGATTGTTACAACTGGCATACTATTCAGGCTC
TTTCTGAGGAGGAGACTCTCTACGTTGCAGTGGATGGCAATTGTTCTATT
ANCTGTTGGAACTACCACAAGCCAGGTTAAAGGTTGTGTGAGAAGCTTTA
TGCGACTCTCTATTTGCAGCACCAATCCAAGGAATATCTGTTGGGAGTTC
TATCTGCTTGTCTATCAGCACTANCAGGTGTCTACACAGAGTTTCTTGAT
GAAGAAGAATAATGACAGCTTGTACTGGCAGAATGTACAATTATATACGT
TTGGCGCAATTTTTAATATGTCCNGGCTGCTACTGGATGATTTANAAGGA
AGATTTGANAAAGGACCTTGGTGGCAACGCCTTTTTGATGGATATACATA
ACACTTGGATGGGTGTTTCAATCTTGGATCACTGGGCTGTTGGTTCATGG
TTGATGAAATATGTGACATATCTTAAAGTTATTCCCCTCATGGCAAGGTG
TAACAAT
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