EY728646

Overview
NameEY728646
Unique NameEY728646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11763 contig Csv1_Contig11763:1..819. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY728646 vs. ExPASy Swiss-Prot
Match: Y2070_ARATH (Putative BPI/LBP family protein At3g20270 OS=Arabidopsis thaliana GN=At3g20270 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.763e-49
Identity = 100/211 (47.39%), Postives = 140/211 (66.35%), Query Frame = 3 
Query:  180 SNQESFTSIIISQTGLDFVKDLLITKAISSIIPLALPKIERAVKIPILGNVRMVLSNITIYNIDVLSSYVKPGDTGVVFVASGTTCNLSANWFYEYTTWLLPIQISDHGIASVQVEGMQVGLTLGLKTQEGTLKLSLVDCGCYVKNISIKLDGGASWLYQGMINAFEEQIVSAVENAITKKLREGISKLDSLVPSLPKEMPVDDHASLNIT 812
            SN     SII+S+TGL+F KD LI K I++ +PL LP IE  VKIP++G VRM LSNI I  + V SS ++    G++    G T NLS +W Y Y       +ISDHG ASV+V+GM V +T  L    G+LK++  +  C VKNI I ++GGASWLYQG+++AF++ I+S VE  ++ K+ E + KLDS + SLPK+  +DD A++N+T
Sbjct:   61 SNNGGHISIIVSETGLEFAKDYLIKKVITTTLPLQLPDIENKVKIPLIGKVRMGLSNIQIDAVHVQSSKMETRKDGIILSVLGATANLSMDWSYTYRASFF--EISDHGDASVEVKGMNVRITATLVNDNGSLKIASRENDCTVKNIDIHINGGASWLYQGVVDAFQKMIISTVEKTVSTKIVEKMKKLDSFLQSLPKQRKIDDSAAVNLT 269
The following BLAST results are available for this feature:
BLAST of EY728646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2070_ARATH7.763e-4947.39Putative BPI/LBP family protein At3g20270 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-F05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728646 ID=EY728646; Name=EY728646; organism=Citrus sinensis; type=EST; length=819bp
CCACGCGTCCGGCCCCGCCAATGCCATTGCCGTGAACGGTGAACCTAACA
CCGAGAGCGGGGGGGAATAACTGATAATTTCAATTCCAAAAAAAATGAAA
ATTTTATCAAAAATTCTCCCNGCTTCTTCTTCTCTTTATAACGTCATCTT
TCTTCTCTTCACAAGCCCAAGTTGGCGCCTCAAACCAAGAATCCTTCACA
TCAATAATTATATCTCAAACGGGCCTCGACTTTGTAAAGGACTTGCTCAT
AACGAAAGCAATCTCTTCAATAATCCCGTTAGCGCTACCCAAGATTGAAA
GGGCTGTTAAAATCCCAATTTTGGGCAATGTTCGCATGGTCTTATCAAAC
ATCACGATATATAACATCGATGTTTTGTCCTCTTACGTTAAGCCGGGGGA
CACTGGTGTTGTATTTGTTGCCTCCGGGACCACGTGTAATTTGAGTGCGA
ATTGGTTTTATGAATACACCACTTGGCTTTTGCCCATTCAGATTTCTGAT
CATGGAATTGCTTCTGTTCAGGTTGAAGGCATGCAAGTGGGGCTCACTTT
AGGCTTAAAGACTCAAGAAGGAACTCTGAAGCTTTCCCTTGTTGACTGTG
GTTGCTACGTCAAAAACATCTCTATAAAATTGGATGGAGGAGCTTCTTGG
CTCTATCAAGGAATGATCAATGCGTTTGAAGAGCAAATAGTGTCTGCAGT
GGAAAATGCTATAACCAAGAAACTTAGAGAAGGGATTTCAAAGCTTGATT
CATTGGTACCATCTCTTCCAAAAGAAATGCCAGTGGATGATCATGCTTCT
TTGAATATTACCCTTGGGG
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