EY728616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY728616 vs. ExPASy Swiss-Prot
Match: DXS_ARATH (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=CLA1 PE=1 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 4.302e-44 Identity = 83/107 (77.57%), Postives = 96/107 (89.72%), Query Frame = 1 Query: 1 RRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTGGQAYEAMNNAGFLDSNLIVVLNDNKQVSLPTATLDGPATP 321 RR +M TMR+T+GL+GF KR ES HD FG GHSST+ISAGLGMAV RD+ GKNNNV++VIGDGAMT GQAYEAMNNAG+LDS++IV+LNDNKQVSLPTATLDGP+ P Sbjct: 157 RRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPP 263 HSP 2 Score: 25.409 bits (54), Expect = 4.302e-44 Identity = 12/27 (44.44%), Postives = 17/27 (62.96%), Query Frame = 2 Query: 374 RELR*GRQNPPKPLGGPTPEVPARVDE 454 RELR + K +GGP ++ A+VDE Sbjct: 281 RELREVAKGMTKQIGGPMHQLAAKVDE 307
BLAST of EY728616 vs. ExPASy Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.240e-43 Identity = 81/107 (75.70%), Postives = 96/107 (89.72%), Query Frame = 1 Query: 1 RRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTGGQAYEAMNNAGFLDSNLIVVLNDNKQVSLPTATLDGPATP 321 RR +M+T+R+T+GLAGF KR ES +D FG GHSST+ISAGLGMAV RD+ G+NNNVI+VIGDGAMT GQAYEAMNNAG+LDS++IV+LNDN+QVSLPTATLDGP P Sbjct: 156 RREKMSTLRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVPP 262 HSP 2 Score: 26.5646 bits (57), Expect = 1.240e-43 Identity = 13/27 (48.15%), Postives = 17/27 (62.96%), Query Frame = 2 Query: 374 RELR*GRQNPPKPLGGPTPEVPARVDE 454 RELR + K +GGP E+ A+VDE Sbjct: 280 RELREVAKGVTKQIGGPMHELAAKVDE 306
BLAST of EY728616 vs. ExPASy Swiss-Prot
Match: DXS_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 1.896e-41 Identity = 80/107 (74.77%), Postives = 94/107 (87.85%), Query Frame = 1 Query: 1 RRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTGGQAYEAMNNAGFLDSNLIVVLNDNKQVSLPTATLDGPATP 321 RR +M TMR+T+GL+GF KR ES +D+FG GHSST+ISA LGMAV RD+ G NNV++VIGDGAMT GQAYEAMNNAG+LDS++IV+LNDNKQVSLPTATLDGPA P Sbjct: 153 RRDKMPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPP 259 HSP 2 Score: 23.8682 bits (50), Expect = 1.896e-41 Identity = 12/27 (44.44%), Postives = 16/27 (59.26%), Query Frame = 2 Query: 374 RELR*GRQNPPKPLGGPTPEVPARVDE 454 RELR + K +GG E+ A+VDE Sbjct: 277 RELREVAKGVTKQIGGSVHELAAKVDE 303
BLAST of EY728616 vs. ExPASy Swiss-Prot
Match: DXS_MAGSA (1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=dxs PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 9.132e-31 Identity = 67/97 (69.07%), Postives = 75/97 (77.32%), Query Frame = 1 Query: 1 RRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTGGQAYEAMNNAGFLDSNLIVVLNDNKQVSLP 291 RR RM TMR+ GL+GF +R ES +D FGAGHSSTSISA LGMAVARD+ G NNVI+VIGDGAM+ GQAYEAMNNAG S LIV+LNDN P Sbjct: 95 RRGRMRTMRQGGGLSGFTRRSESEYDPFGAGHSSTSISAALGMAVARDLKGATNNVIAVIGDGAMSAGQAYEAMNNAGAAGSRLIVILNDNDMSIAP 191
BLAST of EY728616 vs. ExPASy Swiss-Prot
Match: DXS_RHOPT (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.470e-30 Identity = 64/97 (65.98%), Postives = 76/97 (78.35%), Query Frame = 1 Query: 1 RRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTGGQAYEAMNNAGFLDSNLIVVLNDNKQVSLP 291 RR R+ T+R GL+GF KR ES HD FGAGHSSTSISAGLGMAVA ++ GK NNVI+VIGDG+++ G AYEAMNNAG ++S LIV+LNDN P Sbjct: 90 RRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGLGMAVASELAGKKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 186
BLAST of EY728616 vs. ExPASy Swiss-Prot
Match: DXS_RHOPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris GN=dxs PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.470e-30 Identity = 64/97 (65.98%), Postives = 76/97 (78.35%), Query Frame = 1 Query: 1 RRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTGGQAYEAMNNAGFLDSNLIVVLNDNKQVSLP 291 RR R+ T+R GL+GF KR ES HD FGAGHSSTSISAGLGMAVA ++ GK NNVI+VIGDG+++ G AYEAMNNAG ++S LIV+LNDN P Sbjct: 90 RRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGLGMAVASELAGKKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 186
BLAST of EY728616 vs. ExPASy Swiss-Prot
Match: DXS_RHOPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=dxs PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.532e-30 Identity = 64/97 (65.98%), Postives = 76/97 (78.35%), Query Frame = 1 Query: 1 RRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTGGQAYEAMNNAGFLDSNLIVVLNDNKQVSLP 291 RR R+ T+R GL+GF KR ES +D FGA HSSTSISAGLGMAVARD+ G NNNVI+VIGDG+++ G AYEAMNNAG ++S LIV+LNDN P Sbjct: 87 RRDRIRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLAGGNNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 183
BLAST of EY728616 vs. ExPASy Swiss-Prot
Match: DXS_OCHA4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dxs PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.532e-30 Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 1 Query: 1 RRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTGGQAYEAMNNAGFLDSNLIVVLNDN-KQVSLPTATL 303 RR R+ T+R+T GL+GF KR ES +D FGA HSSTSISAGLGMAVA D+ G+ NVI+VIGDG+M+ G AYEAMNNAG LD+ LIV+LNDN ++ PT + Sbjct: 89 RRDRIRTLRQTGGLSGFTKRTESEYDPFGAAHSSTSISAGLGMAVASDLSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAM 190
BLAST of EY728616 vs. ExPASy Swiss-Prot
Match: DXS_RHOP5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=dxs PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.919e-30 Identity = 64/97 (65.98%), Postives = 75/97 (77.32%), Query Frame = 1 Query: 1 RRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTGGQAYEAMNNAGFLDSNLIVVLNDNKQVSLP 291 RR R+ T+R GL+GF KR ES HD FGAGHSSTSISAGLGMAVA D+ G NNVI+VIGDG+++ G AYEAMNNAG ++S LIV+LNDN P Sbjct: 90 RRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGLGMAVASDLAGTKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 186
BLAST of EY728616 vs. ExPASy Swiss-Prot
Match: DXS_RHILO (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium loti GN=dxs PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.919e-30 Identity = 65/102 (63.73%), Postives = 79/102 (77.45%), Query Frame = 1 Query: 1 RRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTGGQAYEAMNNAGFLDSNLIVVLNDN-KQVSLPTATL 303 RR R+ T+R+ GL+GF +R ES +D FGA HSSTSISAGLGMA ARD+ G NNVI+VIGDGAM+ G AYEAMNNAG LD+ LIV+LNDN ++ PT + Sbjct: 90 RRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAAARDLSGGRNNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAM 191 The following BLAST results are available for this feature:
BLAST of EY728616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728616 ID=EY728616; Name=EY728616; organism=Citrus sinensis; type=EST; length=472bpback to top |