EY728603

Overview
NameEY728603
Unique NameEY728603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728603 vs. ExPASy Swiss-Prot
Match: PANE_PSEAE (Probable 2-dehydropantoate 2-reductase OS=Pseudomonas aeruginosa GN=panE PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.624e-64
Identity = 126/230 (54.78%), Postives = 147/230 (63.91%), Query Frame = 2
Query:    8 HVLGAGSLGTXXXXXXXXXXXXXXXXXXDHARLASYQTGKGLTLVEHGVAHTYPVVGETSDSPGPIHPLLVACKAYDAQ*AVAQLEHRLAPHAELILLQNGLRSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLGDASQPTPPLWLDDLQAAGIPHAWSTDILTRLWRKLALNCAINPLTVLYQCRNGELQAHQXXXXXXXXXXXXXXXXXGQPAAAQDL 697
            H+LGAGSLG+                  D  RL  YQ   GL+LVE G A  YP+  ET D   PI  LL+ACKAYDA+ A + + HRLA +AEL+LLQNGL SQ AVAA+LP++RC+FASSTEGAFR+ D+RVVFAG G+TWLGD      P WL  L  AGIPH+WS DIL RLWRKLALNCAINPLTVL+ CRNG L+ H                  G  AAA+ L
Sbjct:    4 HILGAGSLGSLWAARLGRAGLPVRLILRDRQRLRRYQQAGGLSLVEDGQASLYPIAAETPDGGQPIQRLLLACKAYDAEEAASSVAHRLAGNAELLLLQNGLGSQQAVAARLPRSRCLFASSTEGAFRDGDFRVVFAGRGHTWLGDPRDTNAPAWLTQLSQAGIPHSWSDDILERLWRKLALNCAINPLTVLHDCRNGGLRQHPEEIAALCDELGQLLHASGYDAAARSL 233          
BLAST of EY728603 vs. ExPASy Swiss-Prot
Match: PANE_YERPE (2-dehydropantoate 2-reductase OS=Yersinia pestis GN=panE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.686e-15
Identity = 52/142 (36.62%), Postives = 72/142 (50.70%), Query Frame = 2
Query:  212 LLVACKAYDAQ*AVAQLEHRLAPHAELILLQNGLRSQDAVAAQLPQARCIFASS-TEGAFRESDWRVVFAGHGYTWLGDASQPTPPLWLDDLQAAGIPH------AWSTDILTRLWRKLALNCAINPLTVLYQCRNGELQAH 616
            LLV  KA+    AV  L  +L P  +++LL NG+ +Q+    +LP    +F    T  A R     ++    G T +G    PT  + +DD   A   H      AW  DI    W+KLA+NC INPLT LY CRNG++Q +
Sbjct:   67 LLVCLKAWQVSSAVTALLPKLNPECKILLLHNGMGTQE----ELPLNEHVFLHGVTTHAARRDGNTIIHVASGMTHIG----PTSSVIIDDNHLADTLHQALPDVAWHNDISAACWQKLAVNCVINPLTGLYNCRNGDVQRY 200          
BLAST of EY728603 vs. ExPASy Swiss-Prot
Match: PANE_VIBCH (2-dehydropantoate 2-reductase OS=Vibrio cholerae GN=panE PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.267e-14
Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 2
Query:  212 LLVACKAYDAQ*AVAQLEHRLAPHAELILLQNGLRSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLG--DASQPTPPLWLDDLQAAGIPHAWSTDILTRLWRKLALNCAINPLTVLYQCRNGELQA 613
            LL+  KA+  + A+  L   L     L+ + NG+ + +A++  L     +FA++T GA + +  +V   G G T +G  +A         D    A  P  W+ +I   LWRKLA+NCAINPLT ++QC NG L A
Sbjct:   63 LLITVKAWQVEAALQPLLPHLNRETILLFMHNGMGAVEAISESLTHFPVLFATTTHGALKATLNQVSHTGFGQTQVGPFNALGARCDFIADVFNHALAPVTWNPEIQQALWRKLAVNCAINPLTAIHQCANGALVA 198          
BLAST of EY728603 vs. ExPASy Swiss-Prot
Match: PANE_ECO57 (2-dehydropantoate 2-reductase OS=Escherichia coli O157:H7 GN=panE PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.072e-13
Identity = 52/165 (31.52%), Postives = 79/165 (47.88%), Query Frame = 2
Query:  212 LLVACKAYDAQ*AVAQLEHRLAPHAELILLQNGLRSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLGDASQPTPPL-WLDDLQAAGIPH-AWSTDILTRLWRKLALNCAINPLTVLYQCRNGELQAHQXXXXXXXXXXXXXXXXXGQPAAAQDLR 700
            LLV  KA+    AV  L   L     ++L+ NG+ + + +  Q  Q   +  ++T  A R+ +  ++   +G T +G A Q      +L D+    +P  AW  +I   LWRKLA+NC INPLT ++ C NGEL+ H                  G   +A+DLR
Sbjct:   67 LLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEEL--QNIQQPLLMGTTTHAACRDGNV-IIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLR 228          
BLAST of EY728603 vs. ExPASy Swiss-Prot
Match: PANE_SHIFL (2-dehydropantoate 2-reductase OS=Shigella flexneri GN=panE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.401e-13
Identity = 52/165 (31.52%), Postives = 79/165 (47.88%), Query Frame = 2
Query:  212 LLVACKAYDAQ*AVAQLEHRLAPHAELILLQNGLRSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLGDASQPTPPL-WLDDLQAAGIPH-AWSTDILTRLWRKLALNCAINPLTVLYQCRNGELQAHQXXXXXXXXXXXXXXXXXGQPAAAQDLR 700
            LLV  KA+    AV  L   L     ++L+ NG+ + + +  Q  Q   +  ++T  A R+ +  ++   +G T +G A Q      +L D+    +P  AW  +I   LWRKLA+NC INPLT ++ C NGEL+ H                  G   +A+DLR
Sbjct:   67 LLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEEL--QNIQQPLLMGTTTHAARRDGNV-IIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLR 228          
BLAST of EY728603 vs. ExPASy Swiss-Prot
Match: PANE_ECOLI (2-dehydropantoate 2-reductase OS=Escherichia coli (strain K12) GN=panE PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.401e-13
Identity = 52/165 (31.52%), Postives = 79/165 (47.88%), Query Frame = 2
Query:  212 LLVACKAYDAQ*AVAQLEHRLAPHAELILLQNGLRSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLGDASQPTPPL-WLDDLQAAGIPH-AWSTDILTRLWRKLALNCAINPLTVLYQCRNGELQAHQXXXXXXXXXXXXXXXXXGQPAAAQDLR 700
            LLV  KA+    AV  L   L     ++L+ NG+ + + +  Q  Q   +  ++T  A R+ +  ++   +G T +G A Q      +L D+    +P  AW  +I   LWRKLA+NC INPLT ++ C NGEL+ H                  G   +A+DLR
Sbjct:   67 LLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEEL--QNIQQPLLMGTTTHAARRDGNV-IIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLR 228          
BLAST of EY728603 vs. ExPASy Swiss-Prot
Match: PANE_SALTY (2-dehydropantoate 2-reductase OS=Salmonella typhimurium GN=panE PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12
Identity = 52/165 (31.52%), Postives = 78/165 (47.27%), Query Frame = 2
Query:  212 LLVACKAYDAQ*AVAQLEHRLAPHAELILLQNGLRSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLGDA-SQPTPPLWLDDLQAAGIPH-AWSTDILTRLWRKLALNCAINPLTVLYQCRNGELQAHQXXXXXXXXXXXXXXXXXGQPAAAQDLR 700
            LLV  KA+    AV  L   L   + ++L+ NG+ + + +  Q  Q   +  + T  A R+ +  ++   +G T +G A  Q     +L D+    +P  AW  +I   +WRKLA+NC INPLT L+ C NGEL+ H                  G   +A DLR
Sbjct:   67 LLVTLKAWQVSDAVRTLASTLPVTSPILLIHNGMGTIEEL--QNIQQPMLMGTITHAARRDGNI-IIHVANGTTHIGPAREQDGDYSYLADILQGVLPDVAWHNNIRAEMWRKLAVNCVINPLTALWNCPNGELRHHTDEINAICEEVAAVIEREGYHTSADDLR 228          
BLAST of EY728603 vs. ExPASy Swiss-Prot
Match: PANE_SALTI (2-dehydropantoate 2-reductase OS=Salmonella typhi GN=panE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11
Identity = 46/137 (33.58%), Postives = 72/137 (52.55%), Query Frame = 2
Query:  212 LLVACKAYDAQ*AVAQLEHRLAPHAELILLQNGLRSQDAVAAQLPQARCIFASSTEGAFRESDWRVVFAGHGYTWLGDA-SQPTPPLWLDDLQAAGIPH-AWSTDILTRLWRKLALNCAINPLTVLYQCRNGELQAH 616
            LLV  KA+    AV  L   L   + ++L+ NG+ + + +  Q  Q   +  + T  A R+ +  ++   +G T +G A  Q     +L ++    +P  AW  +I   +WRKLA+NC INPLT L+ C NGEL+ H
Sbjct:   67 LLVTLKAWQVSDAVRTLASTLPVTSPILLIHNGMGTIEEL--QSIQQPMLMGAITHAARRDGNI-IIHVANGTTHIGPAREQDGDYSYLAEILQGVLPDVAWHNNIRAEMWRKLAVNCVINPLTALWNCPNGELRHH 200          
The following BLAST results are available for this feature:
BLAST of EY728603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PANE_PSEAE6.624e-6454.78Probable 2-dehydropantoate 2-reductase OS=Pseudomo... [more]
PANE_YERPE5.686e-1536.622-dehydropantoate 2-reductase OS=Yersinia pestis G... [more]
PANE_VIBCH1.267e-1435.292-dehydropantoate 2-reductase OS=Vibrio cholerae G... [more]
PANE_ECO571.072e-1331.522-dehydropantoate 2-reductase OS=Escherichia coli ... [more]
PANE_SHIFL1.401e-1331.522-dehydropantoate 2-reductase OS=Shigella flexneri... [more]
PANE_ECOLI1.401e-1331.522-dehydropantoate 2-reductase OS=Escherichia coli ... [more]
PANE_SALTY1.549e-1231.522-dehydropantoate 2-reductase OS=Salmonella typhim... [more]
PANE_SALTI1.311e-1133.582-dehydropantoate 2-reductase OS=Salmonella typhi ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-A10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728603 ID=EY728603; Name=EY728603; organism=Citrus sinensis; type=EST; length=824bp
ACCTGGTCATGTCCTCGGCGCTGGCAGCCTCGGAACATTGTGGGCTGCCC
GCCTGGCCCGCGCCCGGTTGCCGGTGCGCCTGATCCTGCGGGACCACGCG
CGGCTGGCGAGCTATCAGACCGGCAAGGGCCTGACCCTGGTCGAGCACGG
CGTGGCTCACACCTATCCAGTCGTCGGCGAAACATCCGACAGCCCTGGGC
CGATTCATCCCCTGCTGGTGGCGTGCAAAGCCTACGACGCCCAATAGGCC
GTCGCACAGCTTGAACATCGTCTGGCACCCCACGCCGAGCTGATCCTGCT
GCAAAACGGGCTGCGCAGCCAGGATGCAGTCGCCGCCCAACTGCCCCAAG
CCCGCTGCATCTTCGCCTCCAGCACCGAAGGCGCGTTTCGCGAAAGCGAC
TGGCGGGTCGTATTTGCCGGCCATGGCTACACCTGGCTGGGAGATGCGAG
CCAGCCTACCCCGCCTCTGTGGCTGGATGACCTGCAAGCCGCCGGCATCC
CCCATGCATGGAGCACCGATATCCTCACCCGCCTGTGGCGCAAACTGGCC
CTGAACTGCGCCATCAACCCGCTGACTGTGCTGTATCAATGCCGCAATGG
GGAACTGCAAGCCCATCAGTGCGAAGTGGCCACCCTGTGCGCCGAACTCG
CCGAACTGCTGGAATGCTGCGGGCAACCCGCCGCCGCGCAGGATTTGAGA
GCGAAATGGAGCGGGTGATCCATGCCCCGGGTTGCCATTACTGCATCTAT
TTGCCAAAAATGGGCGAATGCCCGGGGCACGGATATCCATGTTTGGGTGA
GGTAGTCCTTGGCGAGGGGCGGCT
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