EY728597

Overview
NameEY728597
Unique NameEY728597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728597 vs. ExPASy Swiss-Prot
Match: WRK20_ARATH (Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 3
Query:   78 ERNDNSRLSVAAASGGMKDPLISNRMKDEVDNDDRPGSKRRKKDNFNANASPVEKLTGEHRVVQTLSEVDFVNDGYRWRKYGQKLVKGNPNPR 356
            E+  N  +   +AS    +   SNR KDE D+DD P SKRR+ +        V+ +     VVQTLSEVD ++DGYRWRKYGQK+V+GNPNPR
Sbjct:  310 EQTGNPEVPPISASDDGGEAAASNRNKDEPDDDD-PFSKRRRMEGAMEITPLVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPR 401          
BLAST of EY728597 vs. ExPASy Swiss-Prot
Match: WRKY1_ARATH (WRKY transcription factor 1 OS=Arabidopsis thaliana GN=WRKY1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 50/114 (43.86%), Postives = 67/114 (58.77%), Query Frame = 3
Query:   36 DKSSDTHGQTPRQTER---NDNSRLSVAAASGGMKDPLI-SNRMKDEVDNDD--RPGSKRRKKDNFNANASPVEKLTGEHR-VVQTLSEVDFVNDGYRWRKYGQKLVKGNPNPR 356
            +K+S +  QT RQTE    +    +SV   +  +K  +  S+R+  +  + D   P +KRRKK   N   SPVE+ T + R VV T +  D VNDGYRWRKYGQK VKG+P PR
Sbjct:  215 EKTSGSSVQTLRQTEPPKIHGGLHVSVIPPADDVKTDISQSSRITGDNTHKDYNSPTAKRRKKGG-NIELSPVERSTNDSRIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPR 327          
BLAST of EY728597 vs. ExPASy Swiss-Prot
Match: WRKY2_ARATH (Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12
Identity = 37/61 (60.66%), Postives = 43/61 (70.49%), Query Frame = 3
Query:  177 DRPGSKRRKKDNFNANASPVEKLTGEHRVV-QTLSEVDFVNDGYRWRKYGQKLVKGNPNPR 356
            D   SKRRK + F A  S   +   E RVV QT S+VD ++DGYRWRKYGQK+VKGNPNPR
Sbjct:  447 DESESKRRKLEAFAAEMSGSTRAIREPRVVVQTTSDVDILDDGYRWRKYGQKVVKGNPNPR 507          
BLAST of EY728597 vs. ExPASy Swiss-Prot
Match: WRK33_ARATH (Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12
Identity = 38/69 (55.07%), Postives = 45/69 (65.22%), Query Frame = 3
Query:  156 KDEVDNDDRPGSKRRKKDN-FNANASPVEKLTGEHR-VVQTLSEVDFVNDGYRWRKYGQKLVKGNPNPR 356
            +DE D    P +KR K DN  N       K   E R VVQT S++D ++DGYRWRKYGQK+VKGNPNPR
Sbjct:  314 RDEEDCGSEPEAKRWKGDNETNGGNGGGSKTVREPRIVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPR 382          
BLAST of EY728597 vs. ExPASy Swiss-Prot
Match: WRK58_ARATH (Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 3
Query:  159 DEVDNDDRPGSKRRKKDNFNANASPVEKLTGEHRVVQTLSEVDFVNDGYRWRKYGQKLVKGNPNPR 356
            D+ D++D P SK R+ D  +     V   T    +VQT SEVD ++DGYRWRKYGQK+VKGNP+PR
Sbjct:  264 DDEDDEDLPASKIRRIDGVSTTHRTV---TEPKIIVQTKSEVDLLDDGYRWRKYGQKVVKGNPHPR 326          
BLAST of EY728597 vs. ExPASy Swiss-Prot
Match: WRK34_ARATH (Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 3
Query:  189 SKRRKKDNFNANASPVEKLTGEHRVV-QTLSEVDFVNDGYRWRKYGQKLVKGNPNPR 356
            SKRRK + +    S   + + E RVV QT S++D ++DGYRWRKYGQK+VKGNPNPR
Sbjct:  336 SKRRKLEAYATETSGSTRASREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPR 392          
BLAST of EY728597 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 43/99 (43.43%), Postives = 55/99 (55.56%), Query Frame = 3
Query:   75 TERNDNSRLSVAAASGGMKDPLISNRMKDEVDNDDRPGSKRRKKD-NFNANASPVEKLTGEHRVV-QTLSEVDFVNDGYRWRKYGQKLVKGNPNPRFAS 365
            +E +DN   S    S G KD             +D P  KRR  +   +  A   ++   E RV+ QT SEVD ++DGYRWRKYGQK+VKGNP PRF+S
Sbjct:  579 SEASDNEEDSNGETSEGEKD-------------EDEPEPKRRITEVQVSELADASDRTVREPRVIFQTTSEVDNLDDGYRWRKYGQKVVKGNPYPRFSS 664          
The following BLAST results are available for this feature:
BLAST of EY728597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
WRK20_ARATH4.439e-1649.46Probable WRKY transcription factor 20 OS=Arabidops... [more]
WRKY1_ARATH2.978e-1243.86WRKY transcription factor 1 OS=Arabidopsis thalian... [more]
WRKY2_ARATH5.079e-1260.66Probable WRKY transcription factor 2 OS=Arabidopsi... [more]
WRK33_ARATH8.664e-1255.07Probable WRKY transcription factor 33 OS=Arabidops... [more]
WRK58_ARATH1.132e-1153.03Probable WRKY transcription factor 58 OS=Arabidops... [more]
WRK34_ARATH4.300e-1157.89Probable WRKY transcription factor 34 OS=Arabidops... [more]
WRK19_ARATH5.616e-1143.43Probable WRKY transcription factor 19 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-A03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728597 ID=EY728597; Name=EY728597; organism=Citrus sinensis; type=EST; length=891bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGACAAATCGTCCGAC
ACACATGGGCAGACACCTCGTCAGACTGAACGAAATGACAACTCTCGACT
TTCAGTTGCTGCAGCGAGTGGTGGTATGAAAGATCCTTTGATATCAAATA
GGATGAAAGATGAGGTTGATAATGATGATAGACCGGGATCAAAACGCCGG
AAAAAGGACAATTTTAATGCTAATGCATCTCCGGTGGAAAAACTGACCGG
TGAACATCGTGTTGTTCAGACTTTGAGTGAGGTTGATTTTGTGAATGATG
GGTACCGCTGGCGTAAATATGGGCAGAAATTAGTGAAAGGCAATCCCAAT
CCGAGGTTTGCATCAATTTGATATTCTATGCATGGCTAATGGCAATTCTC
TGTGAATTTTCGTGTTATATTGCTTCCCTAAATATTGGTTATGGATATCT
GTATGCTGTTGAAAGTTGTAAGAAGAGATGTATCCTTAACTCTTTTATGG
AGACTGCAGTTGTTGCATATGTATCCATATCTGATAGCCGGGTATTCTAG
GCTCGTATGATTGTGTGGGGCAGTGTATGCTAGGTCGCTAACGGGATGTA
TGGTTCCGAAGTATGTGGGGATCACATAGGGGGGCCACTTGTGGAAACCA
GGCCATAAAAGAGTCGAAGGTGGGGCCGGTCCGCCCGGGGGGTCGCGGAG
CGGATGAGGGAGGAGTGAGGTTAAGAGCGCCCCTGCGGGCGGGAGGTCCG
AGTCTGGCACCCCGGTGAGGGGGAGGAGTCGGGGTGGAGGGGTGGGGAGG
TGTGGGTCGGGTGGGTGGGCGGGCGAGAGGGTGGGGCGGGGTTGGGTATA
GTATAGAGGGAGATCGGGCGGCGGTGGTGTGGAGCGCCTTT
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