EY728593

Overview
NameEY728593
Unique NameEY728593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728593_ssr107 microsatellite EY728593_ssr107:107..118. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY728593 vs. ExPASy Swiss-Prot
Match: AL3H1_ARATH (Aldehyde dehydrogenase family 3 member H1 OS=Arabidopsis thaliana GN=ALDH3H1 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 3.844e-56
Identity = 117/208 (56.25%), Postives = 147/208 (70.67%), Query Frame = 3
Query:  120 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPXVGAIAAGYALVXKPSEVAPASSSLLGKLVGEYIGFVFHKGC*RGXC*NLCTA*SKVGXXCYTGTSKVAPIVMGAAANIL 743
            +VF +  AS  V ELR +F  G T+ Y WRV+QLK LM + +  EP+IV ALR DL KPELESS+YEV+LL+ SIK ALK+LK+WM PEKAKTS+TTFP+SAEIV EP GVVL+IS WNYPFLLS+DP +GAI+AG A+V KPSE+APASS+LL KL+ +Y+     +               K     YTG+SK+  ++M AAA  L
Sbjct:    5 KVFGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSALLEQKWDKIFYTGSSKIGRVIMAAAAKHL 212          
BLAST of EY728593 vs. ExPASy Swiss-Prot
Match: AL3I1_ARATH (Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 8.861e-53
Identity = 110/214 (51.40%), Postives = 148/214 (69.16%), Query Frame = 3
Query:  108 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPXVGAIAAGYALVXKPSEVAPASSSLLGKLVGEYIGFVFHKGC*RGXC*NLCTA*SKVGXXCYTGTSKVAPIVMGAAA-NILP 746
            K++   F  + A+L V ELR  F SG+TKSY WR+SQL+++ +M++E+E  I +AL QDL KPELE+ + E++  K+S   A+KELK+WM PE  KTS+TTFPSSA+IV EP GVVL+IS WN+PFLLS++P +GAIAAG A+V KPSE+APA+SSLL KL  EY+     +    G          K     +TG ++VA I+M AAA N+ P
Sbjct:   64 KEQASDFSGKEAALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKCITEALYQDLSKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSEPLGVVLVISAWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTIRVIEGGVPETTALLDQKWDKIFFTGGARVARIIMAAAARNLTP 277          
BLAST of EY728593 vs. ExPASy Swiss-Prot
Match: ALDH_CRAPL (Aldehyde dehydrogenase OS=Craterostigma plantagineum GN=ALDH PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.484e-49
Identity = 104/205 (50.73%), Postives = 138/205 (67.32%), Query Frame = 3
Query:  129 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPXVGAIAAGYALVXKPSEVAPASSSLLGKLVGEYIGFVFHKGC*RGXC*NLCTA*SKVGXXCYTGTSKVAPIVMGAAANIL 743
            DAE     V  LR T+ SGKTKSY WRVSQLK+L+K+    + ++V+ALR DL KPE E+ ++E+ ++  + KSALKEL  WM P+K KTS+ T+PSSAEIV EP GVVL+I+ WNYPFLL+LDP +GAIAAG  +V KPSE+APA+S+LL KL+ +Y+     +               +     YTG+SKV  IV+ +AA  L
Sbjct:    5 DAEGV---VDGLRRTYISGKTKSYEWRVSQLKALLKITTHHDKEVVEALRADLKKPEHEAYVHEIFMVSNACKSALKELHQWMKPQKVKTSLATYPSSAEIVSEPLGVVLVITAWNYPFLLALDPMIGAIAAGNCVVLKPSEIAPATSALLAKLLNQYVDTSAIRVVEGAVPEMQALLDQRWDKIFYTGSSKVGQIVLSSAAKHL 206          
BLAST of EY728593 vs. ExPASy Swiss-Prot
Match: AL3A2_RAT (Fatty aldehyde dehydrogenase OS=Rattus norvegicus GN=Aldh3a2 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.179e-30
Identity = 80/211 (37.91%), Postives = 115/211 (54.50%), Query Frame = 3
Query:  153 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPXVGAIAAGYALVXKPSEVAPASSSLLGKLVGEYIGFVFHKGC*RGXC*NLCTA*SKVGXXCYTGTSKVAPIVMGAAANILPHSFGALEETSPCF 785
            V+ LR TF SG+++   +R+ QL++L +M+ ERE DI+ A+  DL K EL +  +EV  +   I   L  L    +   AK ++ T    A + PEP GVVLII  WNYPF+L+L P VGAIAAG A + KPSE++  ++ +L +L+ +Y+    +     G          +     YTG + V  IVM AAA  L      L   SPC+
Sbjct:    5 VQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHEVITILGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVGAIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCY 215          
BLAST of EY728593 vs. ExPASy Swiss-Prot
Match: AL3A2_HUMAN (Fatty aldehyde dehydrogenase OS=Homo sapiens GN=ALDH3A2 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.070e-30
Identity = 78/213 (36.62%), Postives = 116/213 (54.46%), Query Frame = 3
Query:  147 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPXVGAIAAGYALVXKPSEVAPASSSLLGKLVGEYIGFVFHKGC*RGXC*NLCTA*SKVGXXCYTGTSKVAPIVMGAAANILPHSFGALEETSPCF 785
            L V+ +R  F SG+++   +R+ QL++L +M+ ERE DI+ A+  DL K E      EV  +   I   L+ L  W+T +  K ++ T    A I P+P GVVLII  WNYPF+L++ P +GAIAAG A++ KPSE++  ++ +L KL+ +Y+    +     G          +     YTG + V  IVM AAA  L      L   SPC+
Sbjct:    3 LEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQEVITVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPLIGAIAAGNAVIIKPSELSENTAKILAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIFYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCY 215          
BLAST of EY728593 vs. ExPASy Swiss-Prot
Match: AL3A2_PONAB (Fatty aldehyde dehydrogenase OS=Pongo abelii GN=ALDH3A2 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.054e-29
Identity = 78/213 (36.62%), Postives = 116/213 (54.46%), Query Frame = 3
Query:  147 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPXVGAIAAGYALVXKPSEVAPASSSLLGKLVGEYIGFVFHKGC*RGXC*NLCTA*SKVGXXCYTGTSKVAPIVMGAAANILPHSFGALEETSPCF 785
            L V+ +R  F SG+++   +R+ QL++L +M+ ERE DI+ A+  DL K E      EV  +   I   L+ L  W+T +  K ++ T    A I P+P GVVLII  WNYPF+L++ P +GAIAAG A++ KPSE++  ++ +L KL+ +Y+    +     G          +     YTG + V  IVM AAA  L      L   SPC+
Sbjct:    3 LEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLCKSEFNVYSQEVITVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPLIGAIAAGNAVIIKPSELSENTAKMLAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIFYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCY 215          
BLAST of EY728593 vs. ExPASy Swiss-Prot
Match: AL3A2_MACFA (Fatty aldehyde dehydrogenase OS=Macaca fascicularis GN=ALDH3A2 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.054e-29
Identity = 77/211 (36.49%), Postives = 116/211 (54.98%), Query Frame = 3
Query:  153 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPXVGAIAAGYALVXKPSEVAPASSSLLGKLVGEYIGFVFHKGC*RGXC*NLCTA*SKVGXXCYTGTSKVAPIVMGAAANILPHSFGALEETSPCF 785
            V+ +R  F SG+++   +R+ QL++L +M+ ERE DI+ A+  DL K EL +   EV  +   I   L+ L  W+T +  K ++ T    A I P+P GVVLII  WNYPF+L + P +GAIAAG A++ KPSE++  ++ ++ KL+ +Y+    +     G          +     YTG + V  IVM AAA  L      L   SPC+
Sbjct:    5 VQRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLCKSELNAYSQEVITVLGEIDFMLENLPEWVTAKPVKKNLLTMMDEAYIQPQPLGVVLIIGAWNYPFVLIIQPLIGAIAAGNAVIIKPSELSENTAKIVAKLLPQYLDQDLYVVINGGVEETTELLKQRFDHIFYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCY 215          
BLAST of EY728593 vs. ExPASy Swiss-Prot
Match: AL3B1_RAT (Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus GN=Aldh3b1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.348e-29
Identity = 77/211 (36.49%), Postives = 115/211 (54.50%), Query Frame = 3
Query:  153 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPXVGAIAAGYALVXKPSEVAPASSSLLGKLVGEYIGFVFHKGC*RGXC*NLCTA*SKVGXXCYTGTSKVAPIVMGAAANILPHSFGALEETSPCF 785
            +++LR  F +G+T+S  +R +QL+ L   L + +  + +AL QDL K   ES + E+A+ +  +  AL+ L+ WM  EK   ++ T   SA I  EPFG+VLII PWNYP  L+L P VGAIAAG  +V KPSE++ A+  +L +++  Y+          G          +     +TG + V  IVM AAA  L      L   +PC+
Sbjct:    8 LQQLREAFNAGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESEVSEIAISQAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPLNLTLVPLVGAIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFAVVLGGPQETGQLLEHRFDYIFFTGNTYVGKIVMAAAAKHLTPITLELGGKNPCY 218          
BLAST of EY728593 vs. ExPASy Swiss-Prot
Match: AL3B1_MOUSE (Aldehyde dehydrogenase family 3 member B1 OS=Mus musculus GN=Aldh3b1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.348e-29
Identity = 77/211 (36.49%), Postives = 114/211 (54.03%), Query Frame = 3
Query:  153 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPXVGAIAAGYALVXKPSEVAPASSSLLGKLVGEYIGFVFHKGC*RGXC*NLCTA*SKVGXXCYTGTSKVAPIVMGAAANILPHSFGALEETSPCF 785
            +++LR  F  G+T+S  +R +QL+ L   L + +  + +AL QDL K   E+ + E+A+ +  +  AL+ L+ WM  EK   ++ T   SA I  EPFG+VLII PWNYP  L+L P VGAIAAG  +V KPSE++ A+  +L +++  Y+          G          K     +TG + V  IVM AAA  L      L   +PC+
Sbjct:    8 LQQLREAFKEGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFEAEVSEIAISQAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPINLTLVPLVGAIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFTVVLGGRQETGQLLEHKFDYIFFTGNAYVGKIVMAAAAKHLTPITLELGGKNPCY 218          
BLAST of EY728593 vs. ExPASy Swiss-Prot
Match: ALDH2_BACSU (Probable aldehyde dehydrogenase ywdH OS=Bacillus subtilis GN=ywdH PE=3 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 3.067e-29
Identity = 75/210 (35.71%), Postives = 111/210 (52.86%), Query Frame = 3
Query:  153 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPXVGAIAAGYALVXKPSEVAPASSSLLGKLVGEYIGFVFHKGC*RGXC*NLCTA*SKVGXXCYTGTSKVAPIVMGAAANILPHSFGALEETSPC 782
            + + +  FA+G T+    R++ L+ L + +   E D++ AL QDL K E E+   E+ ++   I   +K L+ W  P++ KT +T   S + I+PEP+G VL+I+PWNYP  L+L P +GAIAAG  +V KPSE  PA S++L KL+       +      G   +            +TG+  V  IVM AAA  L      L   SPC
Sbjct:    8 ISKHKAYFAAGHTRPLESRLNILRKLKQAVRTHEADLIAALYQDLHKSEQEAYSTEIGIVLEEISFVMKRLRKWSKPKRVKTPLTHLGSKSIIIPEPYGTVLVIAPWNYPLQLALSPLIGAIAAGNTVVLKPSEYTPAVSAILSKLISSVFPTDYVAMAEGGPDVSTALLQQPFDYIFFTGSVAVGKIVMEAAAKQLIPVTLELGGKSPC 217          
The following BLAST results are available for this feature:
BLAST of EY728593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
AL3H1_ARATH3.844e-5656.25Aldehyde dehydrogenase family 3 member H1 OS=Arabi... [more]
AL3I1_ARATH8.861e-5351.40Aldehyde dehydrogenase family 3 member I1, chlorop... [more]
ALDH_CRAPL3.484e-4950.73Aldehyde dehydrogenase OS=Craterostigma plantagine... [more]
AL3A2_RAT6.179e-3037.91Fatty aldehyde dehydrogenase OS=Rattus norvegicus ... [more]
AL3A2_HUMAN8.070e-3036.62Fatty aldehyde dehydrogenase OS=Homo sapiens GN=AL... [more]
AL3A2_PONAB1.054e-2936.62Fatty aldehyde dehydrogenase OS=Pongo abelii GN=AL... [more]
AL3A2_MACFA1.054e-2936.49Fatty aldehyde dehydrogenase OS=Macaca fasciculari... [more]
AL3B1_RAT2.348e-2936.49Aldehyde dehydrogenase family 3 member B1 OS=Rattu... [more]
AL3B1_MOUSE2.348e-2936.49Aldehyde dehydrogenase family 3 member B1 OS=Mus m... [more]
ALDH2_BACSU3.067e-2935.71Probable aldehyde dehydrogenase ywdH OS=Bacillus s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-H11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728593 ID=EY728593; Name=EY728593; organism=Citrus sinensis; type=EST; length=818bp
CACGCGTCCGTGTTTGTAACCGAAGCCAAAAAAAAAAAAACAGAATTCCA
AAATCCATCTGTCCTTCTCTCGCTTTGTTAATTGCAATGGGGAGTGAGGA
GGAGACGAAGAAGAAGAATGAGGTGTTCGATGCGGAGGCGGCGAGCTTGT
TCGTGAAGGAGCTGAGAGGAACTTTTGCGTCTGGAAAAACGAAGAGCTAC
GGATGGAGAGTGTCTCAGTTGAAGAGTTTGATGAAGATGCTTAACGAGCG
CGAGCCGGACATCGTCGACGCTCTTCGTCAAGATCTCGATAAGCCGGAAC
TTGAATCCTCCATTTACGAGGTAGCATTGTTGAAGACTTCTATCAAGTCA
GCACTCAAGGAACTAAAACACTGGATGACACCAGAGAAGGCTAAAACTTC
AATTACAACTTTTCCTTCATCAGCTGAAATAGTGCCAGAACCATTTGGTG
TTGTATTAATCATCTCACCATGGAATTATCCTTTCTTGTTGTCTCTCGAT
CCANTTGTTGGGGCTATTGCAGCTGGGTATGCTCTGGTTNCTAAGCCATC
TGAAGTTGCTCCAGCATCGTCTTCATTGCTTGGCAAACTAGTTGGTGAAT
ATATTGGATTTGTCTTCCATAAAGGTTGTTGAAGGGGCCNTTGCTGAAAC
CTCTGCACTGCTTGATCAAAAGTGGGATANNAATGTTATACAGGCACATC
CAAAGTTGCCCCCATTGTGATGGGTGCGGCTGCAAACATCTTACCCCATT
CCTTTGGAGCTTTGGAGGAAACCTCCCCTTGTTTTGATTCGGGCTTCATT
TAAAAATTGCTGTTGGCG
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