EY728585

Overview
NameEY728585
Unique NameEY728585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728585 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 50.447 bits (119), Expect = 4.684e-14
Identity = 37/120 (30.83%), Postives = 55/120 (45.83%), Query Frame = 1 
Query:   49 ELDVSRNNMTGGIYLRLFPDDQDQPTT--GLIGLTHFLLPDNELTGRIPEEICPCKLLTLLSLYGKFSNGPIPSSLGNXXXXXXXXXXXXXXXGDIPCSIGTLSKLSD*RLFIDKFSGGI 402
            EL + RNN+TG I           P++   L  +T   + +N+L+G IP EI     L  LSL+     GPIPS+LGN               G IP  +G +  + D  +  +K +G +
Sbjct:  242 ELCLDRNNLTGKI-----------PSSFGNLKNVTLLNMFENQLSGEIPPEIGNMTALDTLSLHTNKLTGPIPSTLGNIKTLAVLHLYLNQLNGSIPPELGEMESMIDLEISENKLTGPV 350

HSP 2 Score: 48.521 bits (114), Expect = 4.684e-14
Identity = 34/91 (37.36%), Postives = 45/91 (49.45%), Query Frame = 2 
Query:  395 GVFPEGLRDLSSLSVLHLSENNFTGQIPPLVCPGGKLIYFTAHVN--ESPVQYR*PYYCSSLYRDRLESNDLT-EISTRLWSLSKLTHVDL 658
            G  P G+ + + L+VL L  NNFTG +P  +C GGKL   T   N  E PV  +    C SL R R + N  + +IS        L  +DL
Sbjct:  372 GPIPPGIANSTELTVLQLDTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVP-KSLRDCKSLIRVRFKGNSFSGDISEAFGVYPTLNFIDL 461
The following BLAST results are available for this feature:
BLAST of EY728585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4885_ARATH4.684e-1430.83Probable LRR receptor-like serine/threonine-protei... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728585 ID=EY728585; Name=EY728585; organism=Citrus sinensis; type=EST; length=837bp
CACGCGTCCGCAGAAATATGCTTGCAAACACAGGACTATCTGGTATATGA
ACTTGATGTATCCCGAAACAATATGACCGGAGGAATATACCTGCGTTTGT
TTCCTGATGACCAAGATCAGCCCACGACTGGTCTTATTGGTCTTACCCAT
TTTCTCCTTCCAGATAACGAACTTACTGGCCGTATTCCTGAAGAGATATG
CCCTTGTAAATTGCTGACTCTTCTATCTCTATATGGGAAATTTTCCAATG
GTCCCATTCCTTCGTCTCTTGGTAATTTGAGTGATTTGGCAGTTCTAGTG
GTATCTTCTAACCTCCTTTCAGGAGACATTCCGTGCAGTATTGGTACTCT
GAGCAAATTATCTGATTAGCGCCTTTTCATTGACAAATTCTCTGGGGGTA
TTTCCTGAAGGATTAAGAGATCTTTCGTCGTTATCTGTTCTACATCTATC
TGAGAACAACTTCACTGGTCAGATACCTCCACTAGTGTGTCCAGGAGGAA
AGCTGATCTATTTCACTGCTCACGTCAACGAATCTCCGGTCCAATACCGA
TAGCCTTATTACTGCTCATCTCTGTACAGAGATCGGCTTGAATCAAATGA
TCTCACCGAGATTTCAACCAGATTGTGGAGTCTATCCAAGCTCACTCACG
TAGACTTGAGATACACAGATGCGGGGGTGAATCTCCCCACATGGGGGGGA
GTGCCACAATGGGCCTGCTGGGACTTGTGGGTATTCTATCCGCGGTACAT
CCTTGTGAGATGGGTTCTTGAGCCAAATGTAAAATTCACTTATCTCCCTT
CACTTTCAGGAAAATACTGCCATATTTGGATTTGACA
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