EY728565

Overview
NameEY728565
Unique NameEY728565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728565 vs. ExPASy Swiss-Prot
Match: FOLB_SHIFL (Dihydroneopterin aldolase OS=Shigella flexneri GN=folB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.361e-17
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 1
Query:    1 TVIGAYDWERGIRQCLRLDLSFAWDNRPXXXXXXXXXXXXXXSVSARIQAFAEQAQFQLVETFAERLTEVLMSEFQIPWLHLKLTKPGAVPAAKGVGVEIERG 309
            T IG YDWE+ I Q L  D+  AWDNR                ++  + +  E A+F LVE  AE + E+L++ F  PW+ +KL+KPGAV  A  VGV IERG
Sbjct:   13 TTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKSDDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAVARAANVGVIIERG 115          
BLAST of EY728565 vs. ExPASy Swiss-Prot
Match: FOLB_ECOLI (Dihydroneopterin aldolase OS=Escherichia coli (strain K12) GN=folB PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.361e-17
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 1
Query:    1 TVIGAYDWERGIRQCLRLDLSFAWDNRPXXXXXXXXXXXXXXSVSARIQAFAEQAQFQLVETFAERLTEVLMSEFQIPWLHLKLTKPGAVPAAKGVGVEIERG 309
            T IG YDWE+ I Q L  D+  AWDNR                ++  + +  E A+F LVE  AE + E+L++ F  PW+ +KL+KPGAV  A  VGV IERG
Sbjct:   13 TTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKSDDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAVARAANVGVIIERG 115          
BLAST of EY728565 vs. ExPASy Swiss-Prot
Match: FOLB_ECOL6 (Dihydroneopterin aldolase OS=Escherichia coli O6 GN=folB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.361e-17
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 1
Query:    1 TVIGAYDWERGIRQCLRLDLSFAWDNRPXXXXXXXXXXXXXXSVSARIQAFAEQAQFQLVETFAERLTEVLMSEFQIPWLHLKLTKPGAVPAAKGVGVEIERG 309
            T IG YDWE+ I Q L  D+  AWDNR                ++  + +  E A+F LVE  AE + E+L++ F  PW+ +KL+KPGAV  A  VGV IERG
Sbjct:   13 TTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKSDDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAVARAANVGVIIERG 115          
BLAST of EY728565 vs. ExPASy Swiss-Prot
Match: FOLB_HAEIN (Dihydroneopterin aldolase OS=Haemophilus influenzae GN=folB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.975e-12
Identity = 40/102 (39.22%), Postives = 53/102 (51.96%), Query Frame = 1
Query:    7 IGAYDWERGIRQCLRLDLSFAWDNRPXXXXXXXXXXXXXXSVSARIQAFAEQAQFQLVETFAERLTEVLMSEFQIPWLHLKLTKPGAVPAAKGVGVEIERGC 312
            IG YDWE+ I+Q L  DL  AWD +                VS  I  + E   F L+E  A  + ++L S +Q+  L +KL+KP AV  A+ VGV I RGC
Sbjct:   15 IGVYDWEQQIKQKLVFDLEMAWDCKQAAETDDVVYCLNYAEVSQAIIDYVESKPFLLIERVAYEVADLLESRYQLQGLKIKLSKPKAVAQARNVGVLIVRGC 116          
The following BLAST results are available for this feature:
BLAST of EY728565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
FOLB_SHIFL5.361e-1742.72Dihydroneopterin aldolase OS=Shigella flexneri GN=... [more]
FOLB_ECOLI5.361e-1742.72Dihydroneopterin aldolase OS=Escherichia coli (str... [more]
FOLB_ECOL65.361e-1742.72Dihydroneopterin aldolase OS=Escherichia coli O6 G... [more]
FOLB_HAEIN3.975e-1239.22Dihydroneopterin aldolase OS=Haemophilus influenza... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-E10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728565 ID=EY728565; Name=EY728565; organism=Citrus sinensis; type=EST; length=900bp
ACCGTGATCGGGGCCTACGACTGGGAACGCGGTATCCGGCAATGCCTGCG
TCTGGACCTGAGCTTCGCCTGGGATAACCGCCCGGCCGCTGCCGGTGATG
ACCTGACCCTGGCACTGGACTATGCCAGCGTGTCCGCACGTATCCAGGCC
TTTGCCGAGCAGGCGCAGTTCCAGCTGGTGGAAACCTTTGCCGAGCGCCT
TACCGAAGTCTTGATGAGTGAATTCCAGATTCCCTGGCTGCACCTCAAAC
TGACCAAGCCCGGCGCCGTTCCGGCAGCCAAGGGCGTGGGCGTGGAGATC
GAGCGCGGATGTCGCTAACTCAGGTTTACCTTGGTCTTGGCAGCAATATC
GAGCGTGAGGCCCATTTACGCGCTGGCCTCGATGCGCTGGCGGGTTTCCT
GACGGATCTGCGCTGTTCGGCGGTGTTTGAAAGCCAGCCGGTGGGCATCA
AGAGCGGGCCGTTCTTCAATCTGGTGGTGTCGGCGTATACCGACCTGCCG
CTGATGGAACTGGACCGTCGATTGAAGTTTATCGAGGCCGACAATGGCCG
CTATGCCCCGGATCGCAAGGGCTTGCCGCTGGATATCGACGTGCTGCTGT
ACGGCGAGCTGGTCGGTAATTTCGATGGCCTGATTCTTCCCCGGGCCGAA
ATCCTGAAGAACGCGNTTGTGCTTGTGGCCGCTGGTCCTGATGGGGCCGG
AGCCTGTGCACCCGGAGGGGGGCAGGAATTTGGCGGGCCTTGGAGGGATG
CGCGAATCAACAGGGCGGGGCGGCGGGCGTTGGGGGGGGGGGGGGTCGGG
GTTGACGCCGCAGGGGCTCCGTGAGGGTTGCAAGCCTGGAGCCGTGGGCT
GGGGGGGCGTACCGGAGGGGGAGCCGTTGAACCTGGGTGGTGTGCGGTGG
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