EY728560

Overview
NameEY728560
Unique NameEY728560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728560 vs. ExPASy Swiss-Prot
Match: Y3028_ARATH (Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.296e-23
Identity = 77/215 (35.81%), Postives = 108/215 (50.23%), Query Frame = 1
Query:   16 YIQKGVLLTAPPFSITHFVSLLRQSLSVALSHFPALAGRFST-----DSDGHISILCNDTGVDFIHAKATFLSVNSLLSPI-DVPDSFKEFFAFDRTISYTGHVRPLAAVQVTELADGVFVGCTVNHAVTDGTSFWHFFNTFAEITKGAKKISKVPDFSRDTVFDSPAVLKFPAGGPAVTFSGAVPLR-------ERIFHFSRE--AXLRMKFXG 615
            Y Q+G+L   P    THF+S LR SLS AL  +   AGR +      D      I C+ +G  FIHA +  +SV+ LL P   VPD F+ F+  +   S  G   PL A+QVTE+ DGVF+G   NH V DG S W+FF T+++I    ++ +  P   +    D    + FP   P      + P R       ER+FHF++   + L+ K  G
Sbjct:   39 YTQRGLLFPKPDPE-THFISRLRTSLSSALDIYFPFAGRLNKVENHEDETVSFYINCDGSGAKFIHAVSDSVSVSDLLRPDGSVPDFFRIFYPMNGVKSIDGLSEPLLALQVTEMRDGVFIGFGYNHMVADGASIWNFFRTWSKICSNGQRENLQPLALKGLFVDG---MDFPIHIPVSDTETSPPSRELSPTFKERVFHFTKRNISDLKAKVNG 249          
BLAST of EY728560 vs. ExPASy Swiss-Prot
Match: DCR_ARATH (BAHD acyltransferase DCR OS=Arabidopsis thaliana GN=DCR PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.141e-18
Identity = 72/197 (36.55%), Postives = 99/197 (50.25%), Query Frame = 1
Query:   37 LTAPPFSITHFVSLLRQSLSVALSHFPALAGRFSTDSDG--HISILCNDT---GVDFIHAKATFLSVNSLLSPIDVPDSFKEFFAFDRTISYTGHVRPLAAVQVTELADGVFVGCTVNHAVTDGTSFWHFFNTFAEITKGAKKISKVPDFSRDTVFDSPAVLKFPA-GGPAVTFSG---AVP------LRERIFHFS 582
            L  P F     V  L+  L + L  F  LAG+ + D +G   +     D+   GV+F  A A  ++V+ L +  D    FKE   ++  ++  G  RPL AVQVT+L DG+ +G   NHAV DGTS WHF +++AEI +GA+ IS  P   R    D+   L   A   P  T +G   A P      L E+IF FS
Sbjct:   52 LEEPTFQ-NEVVENLKDGLGLVLEDFYQLAGKLAKDDEGVFRVEYDAEDSEINGVEFSVAHAADVTVDDLTAE-DGTAKFKELVPYNGILNLEGLSRPLLAVQVTKLKDGLAMGLAFNHAVLDGTSTWHFMSSWAEICRGAQSISTQPFLDRSKARDTRVKLDLTAPKDPNETSNGEDAANPTVEPPQLVEKIFRFS 246          
The following BLAST results are available for this feature:
BLAST of EY728560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y3028_ARATH1.296e-2335.81Uncharacterized acetyltransferase At3g50280 OS=Ara... [more]
DCR_ARATH2.141e-1836.55BAHD acyltransferase DCR OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-E05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728560 ID=EY728560; Name=EY728560; organism=Citrus sinensis; type=EST; length=892bp
CACGCGTCCGGCCAGTACATTCAAAAGGGCGTCCTCCTCACGGCCCCTCC
ATTTTCAATCACCCATTTCGTTTCATTGCTCAGGCAATCACTTTCGGTCG
CTCTTTCCCACTTCCCCGCCCTCGCCGGCCGCTTCTCCACCGACTCCGAC
GGCCACATCAGCATCCTCTGCAACGATACGGGCGTCGACTTCATTCACGC
CAAGGCCACTTTCCTTTCCGTCAACAGCCTCCTCTCGCCCATCGACGTCC
CCGATTCTTTCAAGGAGTTCTTCGCTTTTGACAGAACCATCAGCTACACC
GGCCATGTCAGGCCCTTAGCCGCCGTCCAAGTGACGGAGCTAGCTGACGG
CGTCTTCGTCGGTTGTACGGTCAATCACGCCGTCACTGACGGTACCTCCT
TTTGGCACTTCTTTAATACATTCGCCGAAATCACTAAAGGCGCCAAGAAA
ATCTCGAAAGTTCCCGACTTCTCCCGCGACACCGTTTTTGACTCGCCGGC
GGTGCTCAAGTTCCCCGCCGGTGGCCCCGCTGTTACTTTCTCCGGCGCGG
TGCCGTTGCGTGAGAGAATCTTCCATTTCAGCAGGGAGGCTATNTTGAGG
ATGAAGTTCANGGGCTAATAGGGAATTTTAAAAAGTGATTACTACGAGTC
AGTAAATAACGAGATTATAGGCAAGCAAAGTAACGACAGTTGGAAAACGG
TTTACGGAGAGATACGTCCCTTTTTGAGACGCTGTTAAAACCAACACAAT
CGGACGGACGAAATTCTTTCTTCCAGTCACTGGGCCCCCAGCTATGGCGG
GGCGTGGAACGTGCGAGGAACTCGCGTCTGGCAAAAGAAAACTTTCGCAT
TGGTGGAAACTGCCCCACAGGTCCAGCCGTGGTTCAGTCGTA
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