EY728557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728557 vs. ExPASy Swiss-Prot
Match: ELAV3_MOUSE (ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.800e-13 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 83 PGHPGLRSNGAKPIKELDDTNLYIGYLPPTLDDDGLIKLFSTFGDIVMAKVIKDRVTGMSKGYGFVKYADIQMANNAIASMNGYRLEGRNIAVRVA 370 P P L +NGA + TNL + YLP + D LF + GDI K+++D++TG S GYGFV Y+D A+ AI ++NG +L+ + I V A Sbjct: 23 PNGPLLGTNGATDDSK---TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA 115
BLAST of EY728557 vs. ExPASy Swiss-Prot
Match: ELAV3_HUMAN (ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 5.800e-13 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 83 PGHPGLRSNGAKPIKELDDTNLYIGYLPPTLDDDGLIKLFSTFGDIVMAKVIKDRVTGMSKGYGFVKYADIQMANNAIASMNGYRLEGRNIAVRVA 370 P P L +NGA + TNL + YLP + D LF + GDI K+++D++TG S GYGFV Y+D A+ AI ++NG +L+ + I V A Sbjct: 23 PNGPLLGTNGATDDSK---TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA 115
BLAST of EY728557 vs. ExPASy Swiss-Prot
Match: ELAV1_XENTR (ELAV-like protein 1 OS=Xenopus tropicalis GN=elavl1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.575e-13 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 2 Query: 128 ELDDTNLYIGYLPPTLDDDGLIKLFSTFGDIVMAKVIKDRVTGMSKGYGFVKYADIQMANNAIASMNGYRLEGRNIAVRVA 370 ++ TNL + YLP + D L LFS+ G++ AK+I+D+V G S GYGFV Y + + A AI ++NG RL+ + I V VA Sbjct: 16 DIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSVA 96
BLAST of EY728557 vs. ExPASy Swiss-Prot
Match: RT19_ARATH (40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana GN=RPS19 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.292e-12 Identity = 37/77 (48.05%), Postives = 50/77 (64.94%), Query Frame = 2 Query: 140 TNLYIGYLPPTLDDDGLIKLFSTFGDIVMAKVIKDRVTGMSKGYGFVKYADIQMANNAIASMNGYRLEGRNIAVRVA 370 T LYIG L P D+ L FS+F + A+V+ ++VTG S+GYGFV + AN+AI++MNG L G NI+V VA Sbjct: 31 TKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVA 107
BLAST of EY728557 vs. ExPASy Swiss-Prot
Match: ELV1B_XENLA (ELAV-like protein 1-B OS=Xenopus laevis GN=elavl1-B PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.878e-12 Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 2 Query: 128 ELDDTNLYIGYLPPTLDDDGLIKLFSTFGDIVMAKVIKDRVTGMSKGYGFVKYADIQMANNAIASMNGYRLEGRNIAVRVA 370 ++ TNL + YLP + D L LFS+ G++ AK+I+D+V G S GYGFV Y + + A AI ++NG RL+ + I V A Sbjct: 16 DIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSFA 96
BLAST of EY728557 vs. ExPASy Swiss-Prot
Match: ELAV2_XENTR (ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12 Identity = 38/101 (37.62%), Postives = 57/101 (56.44%), Query Frame = 2 Query: 80 TPGHPGLRSNGAKPIK----ELDDTNLYIGYLPPTLDDDGLIKLFSTFGDIVMAKVIKDRVTGMSKGYGFVKYADIQMANNAIASMNGYRLEGRNIAVRVA 370 T P +N + P++ E TNL + YLP + + L LF + G+I K+++D++TG S GYGFV Y D + A AI ++NG RL+ + I V A Sbjct: 43 TANCPNTINNCSSPVESSNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 143
BLAST of EY728557 vs. ExPASy Swiss-Prot
Match: ELAV1_HUMAN (ELAV-like protein 1 OS=Homo sapiens GN=ELAVL1 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12 Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 2 Query: 128 ELDDTNLYIGYLPPTLDDDGLIKLFSTFGDIVMAKVIKDRVTGMSKGYGFVKYADIQMANNAIASMNGYRLEGRNIAVRVA 370 ++ TNL + YLP + D L LFS+ G++ AK+I+D+V G S GYGFV Y + A AI ++NG RL+ + I V A Sbjct: 16 DIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA 96
BLAST of EY728557 vs. ExPASy Swiss-Prot
Match: ELAV1_MOUSE (ELAV-like protein 1 OS=Mus musculus GN=Elavl1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.910e-12 Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = 2 Query: 128 ELDDTNLYIGYLPPTLDDDGLIKLFSTFGDIVMAKVIKDRVTGMSKGYGFVKYADIQMANNAIASMNGYRLEGRNIAVRVA 370 ++ TNL + YLP + + L LFS+ G++ AK+I+D+V G S GYGFV Y + A AI+++NG RL+ + I V A Sbjct: 16 DIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSYA 96
BLAST of EY728557 vs. ExPASy Swiss-Prot
Match: ROC2_NICPL (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.413e-12 Identity = 39/88 (44.32%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 110 GAKPIKELDDTN-LYIGYLPPTLDDDGLIKLFSTFGDIVMAKVIKDRVTGMSKGYGFVKYADIQMANNAIASMNGYRLEGRNIAVRVA 370 GA+ + +D +N +Y+G L +DD L +LFS G++V AKV+ DR +G S+G+GFV Y+ + N+AI S+NG L+GR+I V A Sbjct: 197 GARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAA 284
BLAST of EY728557 vs. ExPASy Swiss-Prot
Match: ELAV3_XENTR (ELAV-like protein 3 OS=Xenopus tropicalis GN=elavl3 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.413e-12 Identity = 36/96 (37.50%), Postives = 54/96 (56.25%), Query Frame = 2 Query: 83 PGHPGLRSNGAKPIKELDDTNLYIGYLPPTLDDDGLIKLFSTFGDIVMAKVIKDRVTGMSKGYGFVKYADIQMANNAIASMNGYRLEGRNIAVRVA 370 PG G+ NG + TNL + YLP + + LF + G+I K+++D++TG S GYGFV Y D A+ AI ++NG +L+ + I V A Sbjct: 17 PGSVGIL-NGTNGAADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYA 111 The following BLAST results are available for this feature:
BLAST of EY728557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728557 ID=EY728557; Name=EY728557; organism=Citrus sinensis; type=EST; length=872bpback to top |