EY728555

Overview
NameEY728555
Unique NameEY728555
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 3.521e-85
Identity = 167/226 (73.89%), Postives = 171/226 (75.66%), Query Frame = 3
Query:  123 FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVISMQRCXXXXXXXXXXXXXXXXXXMHWQPRTXIVKAAEXXXXXXXXXXXXMNHDTQSCIDSHVMKRKWV 800
            FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVR+PAHIFLDELGIDYDEQDN  VI                               IVK               MNHDTQSC+D +VM+ K V
Sbjct:    9 FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVV 234          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.687e-60
Identity = 121/212 (57.08%), Postives = 141/212 (66.51%), Query Frame = 3
Query:  165 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVISMQRCXXXXXXXXXXXXXXXXXXMHWQPRTXIVKAAEXXXXXXXXXXXXMNHDTQSCIDSHVMKRKWV 800
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDPIKESIVSREMTRRYM DMITYADTD    GAGS+GL C YELSKNP++Q+AIIEQSVSPGGGAWLGGQLFS MVVR+PAH+FLDELGI+YDEQDN  VI                               IVK               MNHDTQSC+D +VM+ K V
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVV 230          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.477e-55
Identity = 118/224 (52.68%), Postives = 143/224 (63.84%), Query Frame = 3
Query:  132 SVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVISMQRCXXXXXXXXXXXXXXXXXXMHWQPRTXIVKAAEXXXXXXXXXXXXMNHDTQSCIDSHVMKRKWV 800
            S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDPIKESIVSREMTRRYMTDMITYA+TD    GAGSAGLS AYE+SKNPN+Q+AIIEQSVSPGGGAWLGGQLFSAM+VR+PAH+FLDE+G+ YDEQD   V+                               IVK                NH TQSC+D +VM+ K V
Sbjct:    9 SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIV 227          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.143e-51
Identity = 117/232 (50.43%), Postives = 140/232 (60.34%), Query Frame = 3
Query:  138 SSTTNKLFDSSFHGAPMSPSLLRLQPIK----------SSRPNNLSISASAS-PPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVISMQRCXXXXXXXXXXXXXXXXXXMHWQPRTXIVKAAEXXXXXXXXXXXXMNHDTQSCIDSHVMKRKWV 800
            ++  + L  SSF G+ + P+  R  P             + P   S+S S+S PPYDL +F+F PIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSK+P + IAI+EQSVSPGGGAWLGGQLFSAMVVR+PAH+FLDELG+ YDE ++  VI                               IV+               MNHDTQSC+D +VM+ K V
Sbjct:    3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVV 233          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.327e-51
Identity = 115/230 (50.00%), Postives = 137/230 (59.57%), Query Frame = 3
Query:  138 SSTTNKLFDSSFHGAPMSPSLLRLQ---------PIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVISMQRCXXXXXXXXXXXXXXXXXXMHWQPRTXIVKAAEXXXXXXXXXXXXMNHDTQSCIDSHVMKRKWV 800
            ++  + L  SSF G+ + PS  R           P     P   SIS S +PPYDL +F+F PIKESIVSREMTRRYMTDMIT+ADTD    GAGSAGLSCAYELSK+P + +AI+EQSVSPGGGAWLGGQLFSAMVVR PAH+FLDELG+ YDE ++  V+                               IV+               MNHDTQSC+D +VM+ K V
Sbjct:    3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVV 230          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.165e-38
Identity = 65/117 (55.56%), Postives = 91/117 (77.78%), Query Frame = 3
Query:  252 ASASPPYDLN-TFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVI 596
            + A P Y L+ +F F PI+ES VSR MTRRY +D+  YA++D    GAGSAGL+ AY + ++ P+++IAIIE SV+PGGGAWLGGQLFSAMVVR+PA +FL+E+G+ Y+++ +  V+
Sbjct:   37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVV 153          

HSP 2 Score: 48.521 bits (114), Expect = 2.165e-38
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 2
Query:  584 YVCDQHAALFTSTIMSKLLARPNVXLFNALAAED 685
            YV  +HAALFTST+M++ LA PNV LFNA A ED
Sbjct:  150 YVVVKHAALFTSTVMARTLALPNVKLFNATAVED 183          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.237e-38
Identity = 65/101 (64.36%), Postives = 79/101 (78.22%), Query Frame = 3
Query:  285 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDN 584
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L+K  P+++IAI+E SVSPGGGAWLGGQLFSAMV+R PA +FL+ELG+ Y+E  N
Sbjct:   48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDAN 148          

HSP 2 Score: 48.521 bits (114), Expect = 6.237e-38
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 2
Query:  584 YVCDQHAALFTSTIMSKLLARPNVXLFNALAAED 685
            YV  +HA+LFTST+MSK+L+ PNV LFNA A ED
Sbjct:  151 YVVVKHASLFTSTLMSKVLSFPNVKLFNATAVED 184          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.341e-37
Identity = 64/105 (60.95%), Postives = 80/105 (76.19%), Query Frame = 3
Query:  285 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVI 596
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L K  P+++IAIIE SVSPGGGAWLGGQLFSAM++R+PA  FL E+G+ Y+++ N  V+
Sbjct:   44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVV 148          

HSP 2 Score: 48.521 bits (114), Expect = 2.341e-37
Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 2
Query:  584 YVCDQHAALFTSTIMSKLLARPNVXLFNALAAED 685
            YV  +HAALFTSTIMSK+L  PN+ LFNA   ED
Sbjct:  145 YVVVKHAALFTSTIMSKVLQMPNIKLFNATCVED 178          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.527e-36
Identity = 64/134 (47.76%), Postives = 88/134 (65.67%), Query Frame = 3
Query:  207 LQPIKSSRPNNLSISASA---SPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVI 596
            + P+KS + +N +++  A    P  +L   KF PIKE  V R M RRY  DM   A +D    GAGSAGLSCAY L +  P+++I I+E +V+PGGG WLGGQL SAMV R+PA  FLD++G+ Y+++ N  V+
Sbjct:   24 MDPLKSKQQSNATVNKPAFKPEPAVNLTPIKFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVV 157          

HSP 2 Score: 48.521 bits (114), Expect = 2.527e-36
Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 2
Query:  584 YVCDQHAALFTSTIMSKLLARPNVXLFNALAAED 685
            +V  +HAALFTST++SK+LA PNV +FNA A ED
Sbjct:  154 FVVVKHAALFTSTVLSKVLAMPNVKMFNATACED 187          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.294e-36
Identity = 64/105 (60.95%), Postives = 79/105 (75.24%), Query Frame = 3
Query:  285 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVI 596
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS  Y L K  P+++IAIIE SVSPGGGAWLGGQLFSAMV+R+PA  FL E+G+ Y+++ N  V+
Sbjct:   48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVV 152          

HSP 2 Score: 46.595 bits (109), Expect = 3.294e-36
Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 2
Query:  584 YVCDQHAALFTSTIMSKLLARPNVXLFNALAAED 685
            YV  +HAALFTSTIMSK+L  PN  LFNA   ED
Sbjct:  149 YVVVKHAALFTSTIMSKVLQLPNCKLFNATCVED 182          
The following BLAST results are available for this feature:
BLAST of EY728555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
THI4_CITSI3.521e-8573.89Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL6.687e-6057.08Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH6.477e-5552.68Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE1.143e-5150.43Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE3.327e-5150.00Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI2_SCHPO2.165e-3855.56Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_ASPOR6.237e-3864.36Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]
THI4_FUSOX2.341e-3760.95Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_UROFA2.527e-3647.76Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]
THI4_FUSSH3.294e-3660.95Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-D11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728555 ID=EY728555; Name=EY728555; organism=Citrus sinensis; type=EST; length=903bp
CAAGCGTCCGCGGACGCGTGGGCACTGCTGCAAATCAAATTACTTCTCAT
TATCAAACTTCTAAGCAGCAGGGGAAGGAGGGGTAAAAAAAAAAAACCAT
GGCAGCCATGGCTTCTACAGCTTTCGCTCCTTCAGTTTCGTCCACCACCA
ATAAGCTCTTTGACTCATCCTTTCATGGGGCTCCCATGTCACCTTCTCTT
CTACGTCTTCAACCCATCAAATCTTCTCGTCCCAACAACTTGTCCATTTC
TGCTTCTGCTTCTCCTCCTTATGACTTGAACACTTTCAAGTTTGACCCCA
TCAAAGAATCCATTGTTTCTCGTGAAATGACACGCAGGTACATGACGGAC
ATGATCACTTATGCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGC
TGGCCTCTCTTGTGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTG
CTATTATCGAACAGTCTGTTAGCCCCGGCGGTGGCGCGTGGCTCGGTGGA
CAGCTCTTCTCTGCCATGGTTGTGCGCGAACCAGCCCACATCTTCCTTGA
CGAGCTTGGCATCGACTACGATGAGCAAGACAATATGTTTGTGATCAGCA
TGCAGCGCTGTTCACCTCCACTATAATGAGCAAGCTCCTGGCCCGCCCCA
ACGTCNAGCTCTTTAATGCATTGGCAGCCGAGGACTTNGATAGTCAAGGC
GGCAGAGTTGGTGGGTGTGGTGACCACTGGGGCGTTGGTGGTCATGAATC
ACGATACACAATCTTGCATTGATTCCCATGTAATGAAACGAAAGTGGGTG
TGAACTCTGGTGGCCTGATGGGCCTTTGGGGCCCTGGAGTAAGAGGTTGA
AAGTTCGGAATATGGAGAAATGCCTGAATGAAGCCTGGACTTACTCTTCA
AAA
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