EY728545

Overview
NameEY728545
Unique NameEY728545
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length330
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728545 vs. ExPASy Swiss-Prot
Match: ATMB_SALTY (Magnesium-transporting ATPase, P-type 1 OS=Salmonella typhimurium GN=mgtB PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 2.265e-15
Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = -3 
Query:    2 RGGVAKPTPMQKSRGFKTVQATAHTVASWGDGINDAPALRDADVGISVDSGADIAKETADIV 187
            R   A+ TP+QK+R  + +Q   HTV   GDGINDAPALRDADVGISVDS ADIAKE++DI+
Sbjct:  620 RAVFARLTPLQKTRILQALQKNGHTVGFLGDGINDAPALRDADVGISVDSAADIAKESSDII 681
[Close]
BLAST of EY728545 vs. ExPASy Swiss-Prot
Match: ATMA_SALTY (Magnesium-transporting ATPase, P-type 1 OS=Salmonella typhimurium GN=mgtA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = -3 
Query:    2 AKPTPMQKSRGFKTVQATAHTVASWGDGINDAPALRDADVGISVDSGADIAKETADIV 175
            A+ TPM K R    ++   H V   GDGINDAPALR AD+GISVD   DIA+E ADI+
Sbjct:  619 ARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADII 676
[Close]
BLAST of EY728545 vs. ExPASy Swiss-Prot
Match: ATMA_ECOLI (Magnesium-transporting ATPase, P-type 1 OS=Escherichia coli (strain K12) GN=mgtA PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = -3 
Query:    2 AKPTPMQKSRGFKTVQATAHTVASWGDGINDAPALRDADVGISVDSGADIAKETADIV 175
            A+ TPM K R    ++   H V   GDGINDAPALR AD+GISVD   DIA+E ADI+
Sbjct:  615 ARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADII 672
[Close]
BLAST of EY728545 vs. ExPASy Swiss-Prot
Match: ATMA_ECO57 (Magnesium-transporting ATPase, P-type 1 OS=Escherichia coli O157:H7 GN=mgtA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.592e-11
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = -3 
Query:    2 AKPTPMQKSRGFKTVQATAHTVASWGDGINDAPALRDADVGISVDSGADIAKETADIV 175
            A+ TPM K R    ++   H V   GDGINDAPALR AD+GISVD   DIA+E ADI+
Sbjct:  615 ARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADII 672
The following BLAST results are available for this feature:
BLAST of EY728545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ATMB_SALTY2.265e-1564.52Magnesium-transporting ATPase, P-type 1 OS=Salmone... [more]
ATMA_SALTY2.592e-1156.90Magnesium-transporting ATPase, P-type 1 OS=Salmone... [more]
ATMA_ECOLI2.592e-1156.90Magnesium-transporting ATPase, P-type 1 OS=Escheri... [more]
ATMA_ECO572.592e-1156.90Magnesium-transporting ATPase, P-type 1 OS=Escheri... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-C12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728545 ID=EY728545; Name=EY728545; organism=Citrus sinensis; type=EST; length=330bp
ACACGATGTCGGCGGTCTCCTTGGCGATGTCGGCGCCGCTGTCCACCGAG
ATGCCGACGTCGGCGTCGCGCAGCGCGGGGGCATCGTTGATGCCGTCACC
CCANGAAGCCACGGTGTGGGCGGTGGCCTGCACCGTCTTGAACCCCCGCG
ACTTCTGCATTGGCGTGGGCTTTGCGACACCCCCCCTGTCTCCGGTCCGG
GGGACACCGTAGTGTGGCCATCTTCTCGATGTGGGGCCCGAGGACCGCCC
TGCTGTCGTGGCCTAGACAGAACCGCTCGCGGGACTGATGGCCGACCGCG
GTATGACGCACGGCATCTTCTGGGCAGCTC
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