EY728515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY728515 vs. ExPASy Swiss-Prot
Match: EMRK_ECOLI (Multidrug resistance protein K OS=Escherichia coli (strain K12) GN=emrK PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.058e-23 Identity = 61/131 (46.56%), Postives = 82/131 (62.60%), Query Frame = -2 Query: 1 KDTEIRAPFDGVVGQRKVRRQQYVMPGLPLLAVVPVEQAYVIANYKETQLQHMAPGQSVEIAVDSFA-GAQWHGKVESIAPGSGAVFALLPPDNATGNFTKIVQRFPVKIRLEPGESRVLP---GMSVIAT 381 K T+I++P G + QR V+ + V PG L+AVVP Q +V AN+KETQL + GQSV I D + +HG+V I G+G F+LLP NATGN+ KIVQR PV++ L+P E P G+S+ AT Sbjct: 207 KRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTAT 337
BLAST of EY728515 vs. ExPASy Swiss-Prot
Match: EMRA_HAEIN (Multidrug resistance protein A homolog OS=Haemophilus influenzae GN=emrA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 57/128 (44.53%), Postives = 80/128 (62.50%), Query Frame = -2 Query: 4 TEIRAPFDGVVGQRKVRRQQYVMPGLPLLAVVPVEQAYVIANYKETQLQHMAPGQSVEIAVDSFA-GAQWHGKVESIAPGSGAVFALLPPDNATGNFTKIVQRFPVKIRLEPGESRVLP---GMSVIA 375 T+IR+P DG V +R V+ Q V G L+AVV EQ ++ AN+KETQL +M GQ V+I D + ++ G + I G+G F+LLP NATGN+ K+VQR PV+I+L+P + P G+S A Sbjct: 216 TKIRSPIDGYVARRNVQVGQAVSVGGALMAVVSNEQMWLEANFKETQLTNMRIGQPVKIHFDLYGKNKEFDGVINGIEMGTGNAFSLLPSQNATGNWIKVVQRVPVRIKLDPQQFTETPLRIGLSATA 343
BLAST of EY728515 vs. ExPASy Swiss-Prot
Match: EMRA_ECOLI (Multidrug resistance protein A OS=Escherichia coli (strain K12) GN=emrA PE=3 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.183e-19 Identity = 52/129 (40.31%), Postives = 76/129 (58.91%), Query Frame = -2 Query: 1 TEIRAPFDGVVGQRKVRRQQYVMPGLPLLAVVPVEQAYVIANYKETQLQHMAPGQSVEIAVDSFA-GAQWHGKVESIAPGSGAVFALLPPDNATGNFTKIVQRFPVKIRLEPGESRVLP---GMSVIAT 375 T I +P G V +R V+ + P PL+AVVP +V AN+KETQ+ +M GQ V I D + ++ GKV + G+G+ F+LLP NATGN+ K+VQR PV+I L+ + P G+S + + Sbjct: 216 TRIISPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVS 344
BLAST of EY728515 vs. ExPASy Swiss-Prot
Match: YHBJ_BACSU (Putative efflux system component yhbJ OS=Bacillus subtilis GN=yhbJ PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16 Identity = 39/120 (32.50%), Postives = 69/120 (57.50%), Query Frame = -2 Query: 13 EIRAPFDGVVGQRKVRRQQYVMPGLPLLAVVPVEQAYVIANYKETQLQHMAPGQSVEIAVDSFAGAQWHGKVESIAPGSGAVFALLPPDNATGNFTKIVQRFPVKIRLEPGESRVLPGMS 372 ++++ DG + + +V+ Q V G + + ++ Y+ AN KET + + G SV++ VD + G VE I + + F +LP N++GN+TK+ Q+ PVKI ++ +VLPGM+ Sbjct: 95 DVKSIMDGTIVKNEVKNGQTVQAGTTIAQTIDMDNLYITANIKETDIADIEVGNSVDVVVDGDPDTTFDGTVEEIGYATNSTFDMLPSTNSSGNYTKVTQKVPVKISIKNPSDKVLPGMN 214
BLAST of EY728515 vs. ExPASy Swiss-Prot
Match: MDTN_SHIFL (Multidrug resistance protein mdtN OS=Shigella flexneri GN=mdtN PE=3 SV=4) HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12 Identity = 44/130 (33.85%), Postives = 67/130 (51.54%), Query Frame = -2 Query: 4 TEIRAPFDGVVGQRKVRRQQYVMPGLPLLAVVPVEQAYVIANYKETQLQHMAPGQSVEIAVDSFAGAQWHGKVESIAPG-----SGAVFALLPPDNATGNFTKIVQRFPVKIRLE-PGESRVLPGMSVIA 375 T +RAPFDG + K Q+ P+ ++ YVIAN++ET L+++ G I + S +G + GKV+SI G G V LP + + N+ ++ QRFPVKI ++ P G S +A Sbjct: 209 TTVRAPFDGRIISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKTFEGKVDSIGYGVLPDDGGLVLGGLPKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGASAVA 338
BLAST of EY728515 vs. ExPASy Swiss-Prot
Match: MDTN_ECOLI (Multidrug resistance protein mdtN OS=Escherichia coli (strain K12) GN=mdtN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11 Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = -2 Query: 4 IRAPFDGVVGQRKVRRQQYVMPGLPLLAVVPVEQAYVIANYKETQLQHMAPGQSVEIAVDSFAGAQWHGKVESIAPG-----SGAVFALLPPDNATGNFTKIVQRFPVKIRLE-PGESRVLPGMSVIA 369 +RAPFDG V K Q+ P+ ++ YVIAN++ET L+++ G I + S +G + GKV+SI G G V LP + + N+ ++ QRFPVKI ++ P G S +A Sbjct: 211 VRAPFDGRVISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKTFEGKVDSIGYGVLPDDGGLVLGGLPKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGASAVA 338
BLAST of EY728515 vs. ExPASy Swiss-Prot
Match: MDTN_ECOL6 (Multidrug resistance protein mdtN OS=Escherichia coli O6 GN=mdtN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11 Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = -2 Query: 4 IRAPFDGVVGQRKVRRQQYVMPGLPLLAVVPVEQAYVIANYKETQLQHMAPGQSVEIAVDSFAGAQWHGKVESIAPG-----SGAVFALLPPDNATGNFTKIVQRFPVKIRLE-PGESRVLPGMSVIA 369 +RAPFDG V K Q+ P+ ++ YVIAN++ET L+++ G I + S +G + GKV+SI G G V LP + + N+ ++ QRFPVKI ++ P G S +A Sbjct: 211 VRAPFDGRVISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKTFEGKVDSIGYGVLPDDGGLVLGGLPKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGASAVA 338
BLAST of EY728515 vs. ExPASy Swiss-Prot
Match: MDTN_ECO57 (Multidrug resistance protein mdtN OS=Escherichia coli O157:H7 GN=mdtN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11 Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = -2 Query: 4 IRAPFDGVVGQRKVRRQQYVMPGLPLLAVVPVEQAYVIANYKETQLQHMAPGQSVEIAVDSFAGAQWHGKVESIAPG-----SGAVFALLPPDNATGNFTKIVQRFPVKIRLE-PGESRVLPGMSVIA 369 +RAPFDG V K Q+ P+ ++ YVIAN++ET L+++ G I + S +G + GKV+SI G G V LP + + N+ ++ QRFPVKI ++ P G S +A Sbjct: 211 VRAPFDGRVISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKTFEGKVDSIGYGVLPDDGGLVLGGLPKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGASAVA 338 The following BLAST results are available for this feature:
BLAST of EY728515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728515 ID=EY728515; Name=EY728515; organism=Citrus sinensis; type=EST; length=685bpback to top |