EY728511

Overview
NameEY728511
Unique NameEY728511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728511 vs. ExPASy Swiss-Prot
Match: MAPT_ARATH (Microtubule-associated protein TORTIFOLIA1 OS=Arabidopsis thaliana GN=TOR1 PE=1 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 8.278e-52
Identity = 129/269 (47.96%), Postives = 167/269 (62.08%), Query Frame = 2
Query:   17 RGPSWRSDMSDAWDFTAYCASRNGQLGSRRAPGGGPVDSRSPKSE-HDNDQVG-GRRAWD-KGTGPVRLGEGPSARSVWQASKDEATLEAIRVAGEDSGTSRSARVAI-PELTAEAMGDD-NVGQERDPIWTSWTNAMDAIQVGDLDTAYAEVVSTGDDFLLVKLMDRSGPVVDQ-SQ*GSNEVCCYWAFHLANC*IVVWDL-V*WKSQLGEXCSEKEAPLLGPSSGMEKGPPG*SPEAPTTIDPLKNWEGRALNTLCTTNPG-WGIEL 799
            RG  W SDM+D W    + ASRNGQ G RR          SP+SE ++N+ +G GRR WD K +G +R GEGPSARSVWQASKDEATLEAIRVAGED    R  RVA+ PE  AEAMGDD N GQERDPIW SW+NAM +++VGD+D AYAEV+  GD  L++KLMD++GP +DQ S   +NE   + +  L +    ++D+ + W  QL E   +  A   G    ++        +A +T+DP ++WEG A   L       W I+L
Sbjct:  605 RGRMWNSDMADDWFIPPHAASRNGQAGPRR----------SPRSEQYENEHMGNGRRGWDNKASGTIRFGEGPSARSVWQASKDEATLEAIRVAGEDGAVPRPTRVAVAPE--AEAMGDDDNEGQERDPIWVSWSNAMHSLRVGDIDAAYAEVLCAGDQHLVIKLMDKTGPSLDQMSNEIANEALNFISQFLLD--HSLYDICLSWSQQLLELVLQDGADTFGVPMELKTEILYNLQDACSTMDPPEDWEGPAPEQLVVQLASVWEIDL 859          
The following BLAST results are available for this feature:
BLAST of EY728511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MAPT_ARATH8.278e-5247.96Microtubule-associated protein TORTIFOLIA1 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-H03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728511 ID=EY728511; Name=EY728511; organism=Citrus sinensis; type=EST; length=872bp
CTGCAAGTACCAGGGTAGGGGCCCTTCTTGGAGATCTGACATGTCTGATG
CTTGGGATTTTACTGCATATTGTGCTTCCAGAAATGGACAGCTTGGTTCT
AGGAGAGCTCCAGGTGGTGGTCCTGTGGATAGCAGATCACCTAAATCAGA
ACATGATAATGATCAGGTTGGTGGCAGGAGAGCATGGGATAAGGGGACTG
GACCTGTCAGGCTCGGTGAGGGGCCTTCTGCCAGAAGTGTCTGGCAAGCA
TCAAAGGATGAAGCTACCCTGGAAGCCATTCGGGTGGCTGGGGAAGACAG
TGGAACATCTCGGTCTGCCAGGGTTGCTATCCCCGAATTAACTGCAGAAG
CCATGGGTGATGACAATGTTGGGCAAGAGAGGGACCCAATCTGGACTTCT
TGGACTAATGCAATGGATGCCATTCAAGTGGGTGATTTGGATACAGCTTA
TGCTGAAGTTGTGTCTACGGGGGATGATTTCTTACTTGTGAAGCTAATGG
ACAGATCGGGACCTGTTGTTGACCAATCTCAATGAGGTAGCAATGAGGTC
TGCTGCTATTGGGCATTTCACTTAGCAAATTGTTGAATTGTTGTCTGGGA
TCTCGTGTGATGGAAATCCCAGTTGGGGGAGGNTTGTTCCGAAAAAGAGG
CCCCCCTGTTGGGCCCCTCCAGTGGAATGGAGAAAGGGCCTCCTGGTTAA
TCTCCTGAAGCTCCCACGACAATTGACCCCCTGAAAAACTGGGAAGGTCG
CGCCCTTAACACCTTGTGTACAACTAACCCCGGCTGGGGAATTGAACTGC
CACATTTGATAAGTAGTTACCTAAAGGCCGATGGGTGATTTCGGATTTTG
GTTGCCAACTCTTGAGGTGGTG
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