EY728506

Overview
NameEY728506
Unique NameEY728506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728506 vs. ExPASy Swiss-Prot
Match: F135B_MOUSE (Protein FAM135B OS=Mus musculus GN=FAM135B PE=2 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 8.327e-27
Identity = 72/173 (41.62%), Postives = 104/173 (60.12%), Query Frame = 1
Query:  157 LKIVVFVHGFQGHHLDLRLIRNQWLLIDP--KIDFLMSEGNEEKTSGDFREMGFRLAHEVISFVKKKMDKVSRTVGLRNIKLSFVGHSIGNIIIRAALAESIMEPYLRYLNTYVSVSGPHLGYLYSSNSLFNSGMWLLLKKLKSTVCIHQPPFPIGPRSRENFL*QLSQQKNL 669
            + +VV VHG  G+  DLRL++    L  P  K+DFLMSE N+  T  DF  M  RL  E+I  ++     +SR        +SF+GHS+GNIIIR+ L       YL  L+T++S+SGPHLG LY++++L ++G+W L++KLK +  + Q  F      R+ FL QLSQ+  L
Sbjct: 1136 IHLVVCVHGLDGNSADLRLVKTFIELGLPGGKLDFLMSEKNQTDTFADFDTMTDRLLDEIIQHIQLYNLSISR--------ISFIGHSLGNIIIRSVLTRPRFRYYLNKLHTFLSLSGPHLGTLYNNSTLVSTGLW-LMQKLKKSGSLLQLTFRDNADLRKCFLYQLSQKTGL 1299          

HSP 2 Score: 24.2534 bits (51), Expect = 8.327e-27
Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  690 LLSSPQEGYVPYQSA 734
            L++SPQ+ YVP+ SA
Sbjct: 1307 LVASPQDRYVPFHSA 1321          
BLAST of EY728506 vs. ExPASy Swiss-Prot
Match: F135B_HUMAN (Protein FAM135B OS=Homo sapiens GN=FAM135B PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.084e-26
Identity = 72/173 (41.62%), Postives = 104/173 (60.12%), Query Frame = 1
Query:  157 LKIVVFVHGFQGHHLDLRLIRNQWLLIDP--KIDFLMSEGNEEKTSGDFREMGFRLAHEVISFVKKKMDKVSRTVGLRNIKLSFVGHSIGNIIIRAALAESIMEPYLRYLNTYVSVSGPHLGYLYSSNSLFNSGMWLLLKKLKSTVCIHQPPFPIGPRSRENFL*QLSQQKNL 669
            + +VV VHG  G+  DLRL++    L  P  K+DFLMSE N+  T  DF  M  RL  E+I  ++     +SR        +SF+GHS+GNIIIR+ L       YL  L+T++S+SGPHLG LY++++L ++G+W L++KLK +  + Q  F      R+ FL QLSQ+  L
Sbjct: 1139 IHLVVCVHGLDGNSADLRLVKTFIELGLPGGKLDFLMSEKNQMDTFADFDTMTDRLLDEIIQHIQLYNLSISR--------ISFIGHSLGNIIIRSVLTRPRFRYYLNKLHTFLSLSGPHLGTLYNNSTLVSTGLW-LMQKLKKSGSLLQLTFRDNADLRKCFLYQLSQKTGL 1302          

HSP 2 Score: 24.2534 bits (51), Expect = 1.084e-26
Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  690 LLSSPQEGYVPYQSA 734
            L++SPQ+ YVP+ SA
Sbjct: 1310 LVASPQDRYVPFHSA 1324          
BLAST of EY728506 vs. ExPASy Swiss-Prot
Match: F135B_XENLA (Protein FAM135B OS=Xenopus laevis GN=fam135b PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.837e-26
Identity = 71/173 (41.04%), Postives = 102/173 (58.96%), Query Frame = 1
Query:  157 LKIVVFVHGFQGHHLDLRLIRNQWLLIDP--KIDFLMSEGNEEKTSGDFREMGFRLAHEVISFVKKKMDKVSRTVGLRNIKLSFVGHSIGNIIIRAALAESIMEPYLRYLNTYVSVSGPHLGYLYSSNSLFNSGMWLLLKKLKSTVCIHQPPFPIGPRSRENFL*QLSQQKNL 669
            + +VV VHG  G+  DLRL++    L  P   +DFLMSE N+  T  DF  M  RL  E++  ++     +SR        +SF+GHS+G IIIR+ L       YL  L+T++S+SGPHLG LYS+++L N+G+W L++KLK +  + Q  F      R+ FL QLSQ+  L
Sbjct: 1109 IHLVVCVHGLDGNSADLRLVKTFLELGLPGANLDFLMSEKNQTDTFADFDAMTDRLIDEIVQHIQLYNLSISR--------ISFIGHSLGTIIIRSVLTRPRFRYYLNKLHTFLSLSGPHLGTLYSNSTLVNTGLW-LMQKLKKSGSLLQLTFRDNADLRKCFLYQLSQKPGL 1272          

HSP 2 Score: 24.2534 bits (51), Expect = 1.837e-26
Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  690 LLSSPQEGYVPYQSA 734
            L++SPQ+ YVP+ SA
Sbjct: 1280 LVASPQDRYVPFHSA 1294          
BLAST of EY728506 vs. ExPASy Swiss-Prot
Match: F135A_PONAB (Protein FAM135A OS=Pongo abelii GN=FAM135A PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.060e-24
Identity = 75/197 (38.07%), Postives = 110/197 (55.84%), Query Frame = 1
Query:  109 AGKKPCGTSQPQKGRE--LKIVVFVHGFQGHHLDLRLIRNQWLLIDP--KIDFLMSEGNEEKTSGDFREMGFRLAHEVISFVKKKMDKVSRTVGLRNIKLSFVGHSIGNIIIRAALAESIMEPYLRYLNTYVSVSGPHLGYLYSSNSLFNSGMWLLLKKLKS------TVCIHQPPFPIGPRSRENFL*QLSQQKNL 669
            A   P  + + + G E  + ++V VHG  G+  DLRL++    L  P  +IDFLMSE N+  T  DF  M  RL  E+I +++     VS        K+SF+GHS+GN+IIR+ L     + YL  L+T++S+SGPHLG LY+S++L N+G+W + K  KS      T   H  P       R+ FL +LS++  L
Sbjct:  810 ASSVPYFSVEEEDGSEDGVHLIVCVHGLDGNSADLRLVKTYIELGLPGGRIDFLMSERNQNDTFADFDSMTDRLLDEIIQYIQIYSLTVS--------KISFIGHSLGNLIIRSVLTRPRFKYYLNKLHTFLSLSGPHLGTLYNSSALVNTGLWFMQKWKKSGSLLQLTCRDHSDP-------RQTFLYKLSKKAGL 991          
BLAST of EY728506 vs. ExPASy Swiss-Prot
Match: F135A_HUMAN (Protein FAM135A OS=Homo sapiens GN=FAM135A PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.384e-24
Identity = 75/197 (38.07%), Postives = 109/197 (55.33%), Query Frame = 1
Query:  109 AGKKPCGTSQPQKGRE--LKIVVFVHGFQGHHLDLRLIRNQWLLIDP--KIDFLMSEGNEEKTSGDFREMGFRLAHEVISFVKKKMDKVSRTVGLRNIKLSFVGHSIGNIIIRAALAESIMEPYLRYLNTYVSVSGPHLGYLYSSNSLFNSGMWLLLKKLKS------TVCIHQPPFPIGPRSRENFL*QLSQQKNL 669
            A   P  + + + G E  + ++V VHG  G+  DLRL++    L  P  +IDFLMSE N+  T  DF  M  RL  E+I +++     VS        K+SF+GHS+GN+IIR+ L     + YL  L+T++S+SGPHLG LY+S++L N+G+W + K  KS      T   H  P       R+ FL +LS +  L
Sbjct: 1230 ASSVPYFSVEEEDGSEDGVHLIVCVHGLDGNSADLRLVKTYIELGLPGGRIDFLMSERNQNDTFADFDSMTDRLLDEIIQYIQIYSLTVS--------KISFIGHSLGNLIIRSVLTRPRFKYYLNKLHTFLSLSGPHLGTLYNSSALVNTGLWFMQKWKKSGSLLQLTCRDHSDP-------RQTFLYKLSNKAGL 1411          
BLAST of EY728506 vs. ExPASy Swiss-Prot
Match: F135A_MOUSE (Protein FAM135A OS=Mus musculus GN=Fam135a PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.870e-24
Identity = 74/197 (37.56%), Postives = 108/197 (54.82%), Query Frame = 1
Query:  109 AGKKPCGTSQPQKGRE--LKIVVFVHGFQGHHLDLRLIRNQWLLIDP--KIDFLMSEGNEEKTSGDFREMGFRLAHEVISFVKKKMDKVSRTVGLRNIKLSFVGHSIGNIIIRAALAESIMEPYLRYLNTYVSVSGPHLGYLYSSNSLFNSGMWLLLKKLKS------TVCIHQPPFPIGPRSRENFL*QLSQQKNL 669
            A   P  +   + G E  + ++V VHG  G+  DLRL++    L  P  ++DFLMSE N+  T  DF  M  RL  E+I +++     VS        K+SF+GHS+GN+IIR+ L     + YL  L+T++S+SGPHLG LY+S++L N+G+W + K  KS      T   H  P       R+ FL +LS +  L
Sbjct: 1221 ASSAPYFSMDEEDGSEDGVHLIVCVHGLDGNSADLRLVKTYIELGLPGGRVDFLMSERNQNDTFADFDCMTDRLLDEIIQYIQIYSLTVS--------KISFIGHSLGNLIIRSVLTRPRFKYYLSKLHTFLSLSGPHLGTLYNSSALVNTGLWFMQKWKKSGSLLQLTCRDHSDP-------RQTFLYKLSNKAGL 1402          
The following BLAST results are available for this feature:
BLAST of EY728506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
F135B_MOUSE8.327e-2741.62Protein FAM135B OS=Mus musculus GN=FAM135B PE=2 SV... [more]
F135B_HUMAN1.084e-2641.62Protein FAM135B OS=Homo sapiens GN=FAM135B PE=2 SV... [more]
F135B_XENLA1.837e-2641.04Protein FAM135B OS=Xenopus laevis GN=fam135b PE=2 ... [more]
F135A_PONAB1.060e-2438.07Protein FAM135A OS=Pongo abelii GN=FAM135A PE=2 SV... [more]
F135A_HUMAN1.384e-2438.07Protein FAM135A OS=Homo sapiens GN=FAM135A PE=1 SV... [more]
F135A_MOUSE6.870e-2437.56Protein FAM135A OS=Mus musculus GN=Fam135a PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-G01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728506 ID=EY728506; Name=EY728506; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCTA
CTTTAGAAATGTTGATGTGATAGATAAGCTTGGTTCACAAACAGGACGTA
GCTCTGAAGCTGGAAAAAAGCCATGTGGTACTAGCCAGCCACAAAAGGGT
CGTGAATTGAAGATTGTTGTCTTTGTGCATGGGTTTCAGGGGCATCATCT
GGATTTGCGGCTTATTCGGAATCAATGGCTTTTAATAGATCCAAAGATAG
ATTTTCTCATGTCAGAGGGGAATGAAGAAAAAACATCTGGAGACTTCAGA
GAAATGGGATTTCGGCTGGCTCATGAAGTGATTTCTTTTGTTAAAAAGAA
AATGGATAAAGTGTCTCGAACTGTTGGCCTGAGAAACATCAAGCTCAGTT
TTGTTGGCCATTCTATAGGAAATATCATTATAAGGGCAGCATTAGCAGAG
AGTATTATGGAACCATACCTACGATACCTGAATACATATGTTTCGGTATC
TGGTCCACATTTGGGGTATCTTTACAGTTCAAACTCTTTATTCAACTCTG
GGATGTGGCTTCTGCTGAAGAAGTTGAAGAGTACAGTGTGCATTCATCAG
CCTCCTTTCCCGATAGGACCGAGATCTCGGGAGAACTTTTTGTAGCAACT
TTCTCAGCAGAAGAACTTGGGAAATTGTAGGCTTATGATCTGTTATCTTC
CCCACAGGAGGGTTATGTTCCGTATCAATCGGCCGGGATGTGACGTGGGC
CAGGCACATTCTTGGGACTACGCCAAAAAAGGGCAAGTGTTCCTGGAGAT
GCGTGACAATTGCGTGGGACGGAAAAGGGTCCCC
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