EY728503

Overview
NameEY728503
Unique NameEY728503
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728503 vs. ExPASy Swiss-Prot
Match: YEAM_ECOLI (Uncharacterized HTH-type transcriptional regulator yeaM OS=Escherichia coli (strain K12) GN=yeaM PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 54/158 (34.18%), Postives = 78/158 (49.37%), Query Frame = 1 
Query:   19 LPQQTCVIATSALLLEAVRRAATWAEPQ-LEPPQARIAQVILDEIAGLPQEPFGLPLPQDPRLLRIAQALADDPSDNRLLEQWAQWASVSPRTLARRFVAETGFTFSQWXXXXXXXXXXXXXXXHVPVTRVALDLGYENVSAFIAMFRRTFGTTPGRY 489
            +P   C +  S L  E +   A     Q  EP   R+ QV+ DE+   PQ+   LP+   P++  + + +A  P +   L QWA + ++S R LAR  V ETG +F QW                  V +VA  LGY++ +AFI MF++  G TPGRY
Sbjct:   98 MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
The following BLAST results are available for this feature:
BLAST of EY728503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YEAM_ECOLI8.920e-1934.18Uncharacterized HTH-type transcriptional regulator... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-F09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728503 ID=EY728503; Name=EY728503; organism=Citrus sinensis; type=EST; length=853bp
CCTCAGGCGTGTGCCGGTCTGCCGCAACAGACGTGTGTTATCGCCACGTC
GGCCTTGTTACTGGAGGCTGTCAGGCGCGCGGCAACCTGGGCCGAGCCGC
AGCTGGAGCCGCCACAGGCGCGAATTGCCCAGGTGATCCTTGATGAAATC
GCCGGCTTGCCCCAGGAACCATTTGGCTTGCCGCTGCCCCAGGACCCGCG
GCTGTTGCGCATCGCCCAGGCGCTGGCTGACGACCCGAGCGACAACCGCC
TGCTGGAGCAATGGGCACAGTGGGCCAGCGTATCCCCGCGTACACTGGCC
CGGCGGTTTGTCGCCGAGACCGGGTTCACCTTCAGCCAATGGCGTCAGCG
TGCGCGGTTGTTGCGCGCCTTGGAGTTACTGGCGGCGCACGTACCGGTCA
CCCGGGTTGCGCTGGACTTGGGTTATGAAAACGTCAGTGCCTTTATTGCC
ATGTTCCGGCGCACGTTTGGGACGACGCCGGGGCGATACTTCATGGATGG
CGCAACCGACTACGGGCATACACCGCCACAATCACGAAACAGCCCATAGG
CAACAAATAAGCCAGCGCCACCGTGCTGTTATCCGCCANCTTGCCCATNC
AGTACGGCATCAACGCGCCGCCCGACATCGCCATGATCATGAACGAACTG
GCGCGCTTGGTGTGCGGGCCTAAGTTTTCACGCCCATGGCAACAACGTCG
GGGACATGATCGACATGAAGAAAACAACGCNATCANCGCGATCACCGAGA
TGCCTTTCAGCCCATCACCACCAGCGCACACAAGCGAAATTGATCAGGCC
TAAATTAGCAGAGGTTTTGGGCGCTGAACCGTCCCCTCAACAANTTTTTA
AGC
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