EY728496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728496 vs. ExPASy Swiss-Prot
Match: VPS35_DICDI (Vacuolar sorting protein 35 OS=Dictyostelium discoideum GN=vps35 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.119e-13 Identity = 42/128 (32.81%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 16 IIQVFPDEYHLQTLEILLGAFPQLQPSVDIQTVLSRLMERLSNYAASSPKILTEFLPVKTFSQLNHALGKGIKTPGDMPILGTVTLYSSLLTFTLPVHPGRVEYADQVLGACVKKLSGEGELGDNRAT 399 +IQVFPDE+HL TL+I+L QLQ VD++T+++ L++RL+N+A + ++ + +K F + + + I+ +M + + L+ SLL TL +P + A++VLG C + + + N+ T Sbjct: 269 LIQVFPDEFHLATLDIILQTCAQLQSGVDVKTIIASLIDRLANFATRNADLVPD--NIKIFDIFFNNVKEIIQARPNMELQDILGLHVSLLNLTLKCYPTNKDNANEVLGLCQSIIVNKAKEDINKPT 394
BLAST of EY728496 vs. ExPASy Swiss-Prot
Match: VPS35_BOVIN (Vacuolar protein sorting-associated protein 35 OS=Bos taurus GN=VPS35 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.722e-13 Identity = 48/144 (33.33%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 7 VRCIIQVFPDEYHLQTLEILLGAFPQLQPSVDIQTVLSRLMERLSNYA--ASSPKILTEFLPVKTFSQLNHALGKGIKTPGDMPILGTVTLYSSLLTFTLPVHPGRVEYADQVLGACVK---KLSGEGELGDNRATQRIVALFK 423 + CIIQVFPDE+HLQTL L A +L +V+++ ++ L++RL+ +A P I T+ +K F + + I++ DMP V+L SL+ + +P RV+Y D+VL V+ KL+ E + ++ + L K Sbjct: 263 MECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPTD---IKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLK 403
BLAST of EY728496 vs. ExPASy Swiss-Prot
Match: VPS35_MOUSE (Vacuolar protein sorting-associated protein 35 OS=Mus musculus GN=Vps35 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13 Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 1 Query: 7 VRCIIQVFPDEYHLQTLEILLGAFPQLQPSVDIQTVLSRLMERLSNYA--ASSPKILTEFLPVKTFSQLNHALGKGIKTPGDMPILGTVTLYSSLLTFTLPVHPGRVEYADQVLGACVK---KLSGEGELGDNRATQRIVALFK 423 + CIIQVFPDE+HLQTL L A +L +V+++ ++ L++RL+ +A P I E +K F + + I++ DMP V+L SL+ + +P RV+Y D+VL V+ KL+ E + ++ + L K Sbjct: 263 MECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPAE---IKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLK 403
BLAST of EY728496 vs. ExPASy Swiss-Prot
Match: VPS35_HUMAN (Vacuolar protein sorting-associated protein 35 OS=Homo sapiens GN=VPS35 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12 Identity = 47/144 (32.64%), Postives = 78/144 (54.17%), Query Frame = 1 Query: 7 VRCIIQVFPDEYHLQTLEILLGAFPQLQPSVDIQTVLSRLMERLSNYA--ASSPKILTEFLPVKTFSQLNHALGKGIKTPGDMPILGTVTLYSSLLTFTLPVHPGRVEYADQVLGACVK---KLSGEGELGDNRATQRIVALFK 423 + CIIQVFPDE+HLQTL L A +L +V+++ ++ L++RL+ +A P I + +K F + + I++ DMP V+L SL+ + +P RV+Y D+VL V+ KL+ E + ++ + L K Sbjct: 263 MECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPAD---IKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLK 403 The following BLAST results are available for this feature:
BLAST of EY728496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728496 ID=EY728496; Name=EY728496; organism=Citrus sinensis; type=EST; length=903bpback to top |