EY728494

Overview
NameEY728494
Unique NameEY728494
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10374 contig Csv1_Contig10374:5..893. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PATT5_SOLTU (Patatin-T5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.152e-46
Identity = 108/224 (48.21%), Postives = 141/224 (62.95%), Query Frame = 3
Query:  117 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIATYRK 782
            G+ +TVLS              L FLE +LQE+D  + AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGPKIF Q S S F             GPKYDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAPT+FPPHY  T  S +G    F+LVDG VA  ++P LL+I+   K
Sbjct:   26 GEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTSTGGLLTAMITTPNETNRPFAAAKDIVPFYFEHGPKIF-QSSGSIF-------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTFFPPHYFATNTS-NGDKYEFNLVDGAVATVDDPALLSISVATK 234          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PT2K4_SOLTU (Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.117e-46
Identity = 107/224 (47.77%), Postives = 139/224 (62.05%), Query Frame = 3
Query:  117 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIATYRK 782
            G+ +TVLS              L FLE +LQE+D  + AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI        LGP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  E+   +A++ DIC ST+AAP YFPPHY  T  S+  R   F+LVDGGVA   +P LL+++   K
Sbjct:   14 GEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------LGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAESPQLDAKMYDICYSTAAAPIYFPPHYFVTHTSNGDRYE-FNLVDGGVATVGDPALLSLSVATK 222          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PT3K1_SOLTU (Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.377e-46
Identity = 105/219 (47.95%), Postives = 138/219 (63.01%), Query Frame = 3
Query:  117 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVAANNPTLLAIA 770
            G+ +TVLS              L FLE +LQE+D  + AR+ADYFDV+ GT TGGL+T M+T PN+   PF+AAKDI  FY +HGPKIF     S F           L+ PKYDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  +    +A++ DIC ST+AAPTYFPPHY  T  S +G    F+LVDG VAA +P+LL+I+
Sbjct:   14 GEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTGTGGLLTAMITTPNENNRPFAAAKDIIPFYFDHGPKIFEP---SGFH----------LVEPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKTPELDAKMYDICYSTAAAPTYFPPHYFATNTS-NGDQYDFNLVDGDVAAVDPSLLSIS 218          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PAT0_SOLTU (Patatin OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.552e-45
Identity = 104/220 (47.27%), Postives = 137/220 (62.27%), Query Frame = 3
Query:  117 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIA 770
            G+ +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI         GP+YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  E+   +A++ DIC ST+AAP YFPPH+  T  S +G T  F+LVDG VA   +P LL+++
Sbjct:   26 GEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAESPQLDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGAVATVGDPALLSLS 230          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PAT07_SOLTU (Patatin-07 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.552e-45
Identity = 107/236 (45.34%), Postives = 143/236 (60.59%), Query Frame = 3
Query:   93 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIATYRKK 785
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI         GP+YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A+++DIC ST+AAPTYFPPHY  T  S +G    F+LVDG VA   +P LL+++   ++
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMSDICYSTAAAPTYFPPHYFATNTS-NGDKYEFNLVDGAVATVADPALLSVSVATRR 235          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PAT05_SOLTU (Patatin-05 OS=Solanum tuberosum GN=pat1-k1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.944e-45
Identity = 101/225 (44.89%), Postives = 139/225 (61.78%), Query Frame = 3
Query:  117 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIATYRKK 785
            G+ +TVLS              L FLE +LQ++D  + AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY +HGP IF   +   F             GPKYDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A+++DIC ST+AAPTYFPPHY  T  S +G    F+LVDG VA   +P LL+++   ++
Sbjct:   26 GEMVTVLSIDGGGIKGIIPGIILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFQHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMSDICYSTAAAPTYFPPHYFATNTS-NGDKYEFNLVDGAVATVADPALLSVSVATRR 236          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PAT03_SOLTU (Patatin-03 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.764e-45
Identity = 101/225 (44.89%), Postives = 138/225 (61.33%), Query Frame = 3
Query:  117 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIATYRKK 785
            G+ +TVLS              L FLE +LQ++D  + AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY +HGP IF   +   F             GPKYDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++   +   +A+++DIC ST+AAPTYFPPHY  T  S +G    F+LVDG VA   +P LL+++   ++
Sbjct:   26 GEMVTVLSIDGGGIKGIIPGIILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFQHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLARSPELDAKMSDICYSTAAAPTYFPPHYFATNTS-NGDKYEFNLVDGAVATVADPALLSVSVATRR 236          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PATM3_SOLTU (Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.324e-44
Identity = 108/231 (46.75%), Postives = 141/231 (61.04%), Query Frame = 3
Query:   93 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIA 770
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FYLEHGP IF      N+  SI        +GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPHY  T  S +G    F+LVDGGVA   +P LL+++
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYLEHGPHIF------NYSGSI--------IGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATVGDPALLSLS 230          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PAT15_SOLTU (Patatin-15 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.324e-44
Identity = 107/231 (46.32%), Postives = 141/231 (61.04%), Query Frame = 3
Query:   93 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIA 770
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI         GP+YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPH+  T  S +G T  F+LVDGGVA   +P LL+++
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGGVATVGDPALLSLS 230          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PAT13_SOLTU (Patatin-13 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.324e-44
Identity = 101/225 (44.89%), Postives = 138/225 (61.33%), Query Frame = 3
Query:  117 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIATYRKK 785
            G+ +TVLS              L FLE +LQ++D  + AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY +HGP IF   +   F             GPKYDGKYL  +  E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A+++DIC ST+AAPTYFPPHY  T  S +G    F+LVDG VA   +P LL+++   ++
Sbjct:   26 GEMVTVLSVDGGGIKGIIPGIILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFQHGPHIFNSSTGQFF-------------GPKYDGKYLMQVPQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMSDICYSTAAAPTYFPPHYFATNTS-NGDKYEFNLVDGAVATVADPALLSVSVATRR 236          
The following BLAST results are available for this feature:
BLAST of EY728494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PATT5_SOLTU3.152e-4648.21Patatin-T5 OS=Solanum tuberosum PE=1 SV=1[more]
PT2K4_SOLTU4.117e-4647.77Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 ... [more]
PT3K1_SOLTU5.377e-4647.95Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 ... [more]
PAT0_SOLTU4.552e-4547.27Patatin OS=Solanum tuberosum PE=3 SV=1[more]
PAT07_SOLTU4.552e-4545.34Patatin-07 OS=Solanum tuberosum PE=2 SV=1[more]
PAT05_SOLTU5.944e-4544.89Patatin-05 OS=Solanum tuberosum GN=pat1-k1 PE=1 SV... [more]
PAT03_SOLTU7.764e-4544.89Patatin-03 OS=Solanum tuberosum PE=2 SV=1[more]
PATM3_SOLTU1.324e-4446.75Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1[more]
PAT15_SOLTU1.324e-4446.32Patatin-15 OS=Solanum tuberosum PE=2 SV=1[more]
PAT13_SOLTU1.324e-4444.89Patatin-13 OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-E08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728494 ID=EY728494; Name=EY728494; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGGCAATAATTTCGAATTTAAAAGCTGCTCGATCTGATCGT
ACTTCTATTTAACTTCAAGAAGCTCTTTCAATTTGAAATAAAATGGCCAC
TGCCGGTTCTGCAGAAGGAAAGAAAATAACAGTTCTGAGCATCGATGGAG
GTGGCATTAGGGGCATTATTCCGGGCACTATTTTAGCCTTTCTTGAATCC
AAGCTCCAGGAATTGGATGGACCAAGTGCAAGAATTGCAGATTATTTTGA
TGTAGTAGCAGGAACAAGCACCGGCGGATTGGTAACCACCATGCTTACGG
CACCCAACAAGGAAGGCGGACCTTTCAGTGCTGCAAAGGATATCAATAAT
TTTTATCTTGAGCACGGTCCTAAAATTTTCCCTCAAATTAGCCGCAGCAA
CTTCTTGGAATCGATAGCAAGCTCTATCGATAAACTGCTGCTTGGACCAA
AGTATGATGGGAAGTACCTGCGGACACTAGTAAACGAGCTACTAGGAGAC
GTTACTGTGAAAGAGACTCTTACCAACGTGGTTATACCAACTTTTGACAT
CAAGCTTCTTCAACCAGTCATCTTCTCAACCACCGATGGAAAAGAGAACG
TTTTGAAGAATGCTCGGCTGGCTGATATATGCATAAGCACTTCTGCAGCG
CCCACTTACTTCCCACCTCACTACTTGGAGACTAAGGACAGTGACAGTGG
CAGAACCCGAACTTTTGATCTTGTTGACGGTGGAGTTGCTGCTAATAATC
CTACCCTATTGGCAATAGCCACATATCGAAAGAAATGGTGAAGCAAAACC
CCAGTTCAGGAACAAAACCCATTGACCGTAGAGAATGCTGGTACTATCAC
TAGCCAGGTCAGCCAGAAGAATGAGTAAATGCACCAAACCTC
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