EY728491

Overview
NameEY728491
Unique NameEY728491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length383
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11752 contig Csv1_Contig11752:1..383. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
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BLAST of EY728491 vs. ExPASy Swiss-Prot
Match: Y1051_HAEIN (Uncharacterized ABC transporter ATP-binding protein HI1051 OS=Haemophilus influenzae GN=HI1051 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.292e-14
Identity = 34/117 (29.06%), Postives = 68/117 (58.12%), Query Frame = -2 
Query:    2 QTISPSLTTLVRWQNHRYVLNQGLAFFHNDFAGRVANRVLQTGYSLRDSAVQSVDALWHVILYAASALYLFAEADWRLVIPLVLWIVIYCCMLAYFVPRMQARAVIASEARSKLMGR 352
            QT+       +RW  HR +L Q L+F+ ++FAGRV+ +V+QT  ++RD+ +   +   +V++Y  ++  +    D   ++P + WI+++  +L   +P++   A   ++ARS + GR
Sbjct:  110 QTLQGVFPMRLRWNFHRLMLGQSLSFYQDEFAGRVSAKVMQTALAVRDTVLTLANMFVYVLVYFITSGVVLVALDSWFLLPFITWIILFGLILRTLIPKLSKTAQRQADARSLMTGR 226
The following BLAST results are available for this feature:
BLAST of EY728491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1051_HAEIN7.292e-1429.06Uncharacterized ABC transporter ATP-binding protei... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-E04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728491 ID=EY728491; Name=EY728491; organism=Citrus sinensis; type=EST; length=383bp
TGCGGCCCATCAGCTTGGAGCGCGCTTCCGAGGCGATGACGGCGCGCGCC
TGCATGCGCGGCACGAAGTACGCCAGCATGCAGCAGTAGATGACGATCCA
CAGCACCAGCGGGATCACCAGGCGCCAGTCGGCCTCGGCGAACAGATAGA
GCGCGCTGGCGGCGTACAGGATCACGTGCCACAGCGCGTCCACCGATTGC
ACCGCGGAATCGCGCAGCGAATAGCCGGTCTGCAGCACGCGGTTGGCGAC
GCGGCCGGCGAAGTCGTTGTGGAAGAACGCCAGGCCCTGGTTCAGCACGT
AGCGGTGGTTCTGCCAGCGCACCAGCGTGGTCAGGCTGGGCGAGATGGTC
TGGTGCGACAGCAGGTCGTGCGCCGCGATCGAC
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