EY728485

Overview
NameEY728485
Unique NameEY728485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9784 contig Csv1_Contig9784:72..670. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728485 vs. ExPASy Swiss-Prot
Match: Y1926_ARATH (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thaliana GN=At1g79260 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 3.993e-58
Identity = 112/148 (75.68%), Postives = 129/148 (87.16%), Query Frame = 1
Query:   13 APISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 456
            AP+SYLLGTWRGQG G YPTI +F YGEE+ F+HSG KPVIAYTQKTWKL SG PMHAESGY+RP PDGSIEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV+E+SR FELV+G+L YVV+M+T     L+PHLKA+L KL
Sbjct:   21 APLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSG-KPVIAYTQKTWKLESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKVKEISREFELVDGKLSYVVRMSTT-TNPLQPHLKAILDKL 166          
BLAST of EY728485 vs. ExPASy Swiss-Prot
Match: Y1995_MYCMM (UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1995 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.411e-25
Identity = 64/147 (43.54%), Postives = 90/147 (61.22%), Query Frame = 1
Query:   28 LLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-----ELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 453
            LLGTW GQGSG YPTI  F+Y EE+ F+H G KP + Y QKT  +  G P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A   VI+++       +   A +V  +SR F +V  EL Y ++M    L  L+ HL A LR+
Sbjct:   15 LLGTWAGQGSGEYPTIEPFEYLEEVVFSHVG-KPFLVYAQKTRAVADGAPLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKEVTALSRSFRMVGDELSYRLRMGAVGL-PLQHHLGARLRR 159          
BLAST of EY728485 vs. ExPASy Swiss-Prot
Match: Y3360_MYCUA (UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_3360 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.600e-25
Identity = 63/147 (42.86%), Postives = 90/147 (61.22%), Query Frame = 1
Query:   28 LLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-----ELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 453
            LLGTW GQG+G YPTI  F+Y EE+ F+H G KP + Y QKT  +  G P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A   VI+++       +   A +V  +SR F +V  EL Y ++M    L  L+ HL A LR+
Sbjct:   15 LLGTWAGQGAGEYPTIEPFEYLEEVVFSHVG-KPFLVYAQKTRAVADGTPLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKEVTALSRSFRMVGDELSYRLRMGAVGL-PLQHHLGARLRR 159          
BLAST of EY728485 vs. ExPASy Swiss-Prot
Match: Y2833_MYCPA (UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycobacterium paratuberculosis GN=MAP_2833c PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.211e-24
Identity = 63/152 (41.45%), Postives = 91/152 (59.87%), Query Frame = 1
Query:   13 APISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 453
            A ++ LLGTW G+GSG YPTI  FDY EE+ F+H G KP +AY QKT     G+P+HAE+GY R    G +E+V+A  +G+ E++ G+Y     +I+++       L  +A +V  ++R F +   EL Y VQM       L+ HL AVL +
Sbjct:   10 AALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVG-KPFLAYAQKTRAAADGKPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPSAKEVTALARWFRIDGDELSYSVQMGAVG-QPLQDHLAAVLHR 159          
BLAST of EY728485 vs. ExPASy Swiss-Prot
Match: Y3611_MYCA1 (UPF0678 fatty acid-binding protein-like protein MAV_3611 OS=Mycobacterium avium (strain 104) GN=MAV_3611 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.097e-23
Identity = 62/152 (40.79%), Postives = 89/152 (58.55%), Query Frame = 1
Query:   13 APISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 453
            A ++ LLGTW G+GSG YPTI  FDY EE+ F+H G KP +AY QKT     G+P+HAE+GY R    G +E+V+A  +G+ E++ G+Y     +I+++       L   A +V  + R F +   +L Y VQM       L+ HL AVL +
Sbjct:   10 AALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVG-KPFLAYAQKTRAAADGKPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPTAKEVTALGRWFRIDGDKLSYSVQMGAVG-QPLQDHLAAVLHR 159          
BLAST of EY728485 vs. ExPASy Swiss-Prot
Match: Y449_MYCVP (UPF0678 fatty acid-binding protein-like protein Mvan_0449 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_0449 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.193e-23
Identity = 64/155 (41.29%), Postives = 90/155 (58.06%), Query Frame = 1
Query:   13 APISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELV-------GNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 456
            A ++ LLGTW G+GSG YPTI  F Y EE+ F H G KP + Y Q+T     G P+HAE+GY R +    IE ++A  TG+ E+Q+G   A+   +++  ELV       G+A +V +V R  EL    L Y ++MA      L+ HL AVLR++
Sbjct:   13 AALAPLLGTWVGEGSGEYPTIEPFGYTEEITFGHVG-KPFLTYAQRTRAADDGRPLHAETGYLRASAPDRIEWILAHPTGITEIQEGQLTADGDGLRM--ELVSSSIGRSGSAKEVTDVGRSIELRGDTLTYTLRMAAVG-QPLQHHLSAVLRRV 163          
BLAST of EY728485 vs. ExPASy Swiss-Prot
Match: Y2745_MYCTA (UPF0678 fatty acid-binding protein-like protein MRA_2745 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_2745 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.703e-22
Identity = 59/153 (38.56%), Postives = 89/153 (58.17%), Query Frame = 1
Query:   19 ISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE--------LVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 453
            +S LLG+W G+G+G YPTI  F+Y EE+ F H G KP + YTQ+T  +  G+P+H+E+GY R    G +E+V+A  +G+ E++ GTY+    VI+L+          L   A +V  + R + +   EL Y +QM       L+ HL AVL +
Sbjct:   12 LSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVG-KPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAVG-QPLQDHLAAVLHR 162          
BLAST of EY728485 vs. ExPASy Swiss-Prot
Match: Y2736_MYCBO (UPF0678 fatty acid-binding protein-like protein Mb2736c OS=Mycobacterium bovis GN=Mb2736c PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.703e-22
Identity = 59/153 (38.56%), Postives = 89/153 (58.17%), Query Frame = 1
Query:   19 ISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE--------LVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 453
            +S LLG+W G+G+G YPTI  F+Y EE+ F H G KP + YTQ+T  +  G+P+H+E+GY R    G +E+V+A  +G+ E++ GTY+    VI+L+          L   A +V  + R + +   EL Y +QM       L+ HL AVL +
Sbjct:   12 LSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVG-KPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAVG-QPLQDHLAAVLHR 162          
BLAST of EY728485 vs. ExPASy Swiss-Prot
Match: Y2730_MYCBP (UPF0678 fatty acid-binding protein-like protein BCG_2730c OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=BCG_2730c PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.703e-22
Identity = 59/153 (38.56%), Postives = 89/153 (58.17%), Query Frame = 1
Query:   19 ISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE--------LVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 453
            +S LLG+W G+G+G YPTI  F+Y EE+ F H G KP + YTQ+T  +  G+P+H+E+GY R    G +E+V+A  +G+ E++ GTY+    VI+L+          L   A +V  + R + +   EL Y +QM       L+ HL AVL +
Sbjct:   12 LSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVG-KPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAVG-QPLQDHLAAVLHR 162          
BLAST of EY728485 vs. ExPASy Swiss-Prot
Match: Y2717_MYCTU (UPF0678 fatty acid-binding protein-like protein Rv2717c/MT2790 OS=Mycobacterium tuberculosis GN=Rv2717c PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.703e-22
Identity = 59/153 (38.56%), Postives = 89/153 (58.17%), Query Frame = 1
Query:   19 ISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE--------LVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 453
            +S LLG+W G+G+G YPTI  F+Y EE+ F H G KP + YTQ+T  +  G+P+H+E+GY R    G +E+V+A  +G+ E++ GTY+    VI+L+          L   A +V  + R + +   EL Y +QM       L+ HL AVL +
Sbjct:   12 LSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVG-KPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAVG-QPLQDHLAAVLHR 162          
The following BLAST results are available for this feature:
BLAST of EY728485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
Y1926_ARATH3.993e-5875.68UPF0678 fatty acid-binding protein-like protein At... [more]
Y1995_MYCMM3.411e-2543.54UPF0678 fatty acid-binding protein-like protein MM... [more]
Y3360_MYCUA7.600e-2542.86UPF0678 fatty acid-binding protein-like protein MU... [more]
Y2833_MYCPA2.211e-2441.45UPF0678 fatty acid-binding protein-like protein MA... [more]
Y3611_MYCA11.097e-2340.79UPF0678 fatty acid-binding protein-like protein MA... [more]
Y449_MYCVP3.193e-2341.29UPF0678 fatty acid-binding protein-like protein Mv... [more]
Y2745_MYCTA2.703e-2238.56UPF0678 fatty acid-binding protein-like protein MR... [more]
Y2736_MYCBO2.703e-2238.56UPF0678 fatty acid-binding protein-like protein Mb... [more]
Y2730_MYCBP2.703e-2238.56UPF0678 fatty acid-binding protein-like protein BC... [more]
Y2717_MYCTU2.703e-2238.56UPF0678 fatty acid-binding protein-like protein Rv... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-D06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728485 ID=EY728485; Name=EY728485; organism=Citrus sinensis; type=EST; length=599bp
CCACGCGTCCGAGCACCAATATCCTACTTGCTGGGAACATGGAGAGGCCA
AGGCTCGGGTGGGTACCCTACCATCAATGCCTTCGATTATGGAGAAGAGC
TCAATTTCACACATTCTGGTGGCAAGCCAGTGATAGCATATACCCAGAAG
ACTTGGAAACTGGGTTCAGGAGAGCCTATGCATGCTGAGAGTGGCTACTG
GAGGCCCAACCCTGATGGTTCCATTGAAGTTGTCATTGCTCAAAGCACTG
GCCTTGTTGAAGTTCAGAAAGGAACATATAATGCAGAAGAGAAAGTAATC
AAGCTTCAGAGTGAACTTGTGGGAAATGCTTCCAAGGTGCGAGAGGTAAG
CAGAGTTTTTGAGCTGGTTAATGGTGAACTGCGTTATGTGGTTCAAATGG
CTACCAACCACCTGACTAGTCTTCGTCCACATCTGAAAGCCGTGCTCAGG
AAACTATGATTGTACAATCACTATGTTATTTCTCTTGATATACTGGCAAA
GCGCTCTATGAATGAGCATCTGTTGTAGTGGTACTGACTTGTTGGGGAAG
GTTTTGGTTTCATAATAATAAAAAACTGCTCTCAAAAAAAAAAAAAAAA
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