EY728481

Overview
NameEY728481
Unique NameEY728481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11750 contig Csv1_Contig11750:1..876. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP3_ARATH (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana GN=CLPP3 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.082e-67
Identity = 140/255 (54.90%), Postives = 175/255 (68.63%), Query Frame = 2 
Query:   71 KMEMSLTASSFSKPLFFSNQSLSKTHFLXXXXXXXXXXXIKTRRPTCIKAANS-SPSIAQTLSTNWDVSNFAVNNNTSSPY-LPKFEELDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            +M + L +SS S P+   N   +    +            KT +P C++++ S S    QTLS+NWDVS+F++++   SP  LP FEELDTTNMLLRQRI+FLGSQVDD+TAD +ISQLL LDAEDS++DI L INSPGGS+TAGMGIYDAMK CKADV T+CLGLAASMGAFLLA+G KGKRYCMPN++ MIH   G    ++          +  + K +KI SR TGK   +IE DT RDNF++ WEAK  G
Sbjct:    2 EMSLRLASSSTSNPICLLNPGKNLNFPIRNHRIP------KTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYG 250
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ANOFW (ATP-dependent Clp protease proteolytic subunit OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=clpP PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.579e-42
Identity = 92/166 (55.42%), Postives = 114/166 (68.67%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGS +DD  A+ I+SQLLFL AED +KDI L INSPGGS+TAGM IYD M+  K DV TIC+G+AASMGAFLLAAG KGKR+ +PN+  MIH   G    Q+   E    R +  + K ++ILS  TG+ ++ IE DT RDNFM A +AK  G
Sbjct:   19 DIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVQGQATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAEKAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_GEOTN (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus thermodenitrificans (strain NG80-2) GN=clpP PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.981e-42
Identity = 90/166 (54.22%), Postives = 115/166 (69.28%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RIIFLGS +DD  A+ I+SQLLFL AED +KDI L INSPGGS+TAG+ IYD M+  K DV TIC+G+AASMGAFLLAAG KGKR+ +PN+  MIH   G    Q+   E    R +  + K ++IL+  TG+ ++ IE DT RDNFM A +A+  G
Sbjct:   19 DIYSRLLKDRIIFLGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLRDKLNRILAENTGQPIEVIERDTDRDNFMTAQKAQEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_STAS1 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpP PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.020e-41
Identity = 89/166 (53.61%), Postives = 117/166 (70.48%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+D++KDI L INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG KGKR+ +PNA  MIH   G    Q+   E      +  + K ++IL+  TG+++++IE DT RDNF+ A EAK+ G
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTRAKLNQILAERTGQSIEKIEQDTDRDNFLSAEEAKDYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_STAES (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpP PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.020e-41
Identity = 90/166 (54.22%), Postives = 116/166 (69.88%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG KGKR+ +PNA  MIH   G    Q+   E      +  + K ++ILS  TG+++++I+ DT RDNF+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_STAEQ (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpP PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.020e-41
Identity = 90/166 (54.22%), Postives = 116/166 (69.88%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG KGKR+ +PNA  MIH   G    Q+   E      +  + K ++ILS  TG+++++I+ DT RDNF+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_STAAW (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain MW2) GN=clpP PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.020e-41
Identity = 90/166 (54.22%), Postives = 116/166 (69.88%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG KGKR+ +PNA  MIH   G    Q+   E      +  + K ++ILS  TG+++++I+ DT RDNF+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_STAAT (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=clpP PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.020e-41
Identity = 90/166 (54.22%), Postives = 116/166 (69.88%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG KGKR+ +PNA  MIH   G    Q+   E      +  + K ++ILS  TG+++++I+ DT RDNF+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_STAAS (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain MSSA476) GN=clpP PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.020e-41
Identity = 90/166 (54.22%), Postives = 116/166 (69.88%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG KGKR+ +PNA  MIH   G    Q+   E      +  + K ++ILS  TG+++++I+ DT RDNF+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_STAAR (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain MRSA252) GN=clpP PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.020e-41
Identity = 90/166 (54.22%), Postives = 116/166 (69.88%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG KGKR+ +PNA  MIH   G    Q+   E      +  + K ++ILS  TG+++++I+ DT RDNF+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYG 184
The following BLAST results are available for this feature:
BLAST of EY728481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP3_ARATH1.082e-6754.90ATP-dependent Clp protease proteolytic subunit 3, ... [more]
CLPP_ANOFW4.579e-4255.42ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_GEOTN5.981e-4254.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAS11.020e-4153.61ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAES1.020e-4154.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAEQ1.020e-4154.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAW1.020e-4154.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAT1.020e-4154.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAS1.020e-4154.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAR1.020e-4154.22ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-D02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728481 ID=EY728481; Name=EY728481; organism=Citrus sinensis; type=EST; length=875bp
CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAACTGAACCCACCC
AGCAAACAAATCCAAATAAGAAGATGGAGATGAGTTTGACAGCATCTTCA
TTTTCGAAGCCACTCTTCTTCTCAAACCAATCCCTATCGAAAACCCACTT
TCTCACTGCCGCTAATAACACTAACACTAGCACTACAATCAAAACGAGGA
GACCCACTTGCATAAAGGCCGCGAATAGTTCACCTTCAATAGCACAGACC
TTGTCTACCAACTGGGATGTCTCCAATTTTGCTGTTAATAATAATACTTC
ATCTCCATATCTGCCCAAATTTGAGGAGCTTGACACCACTAACATGCTTC
TCCGTCAGAGAATTATCTTCTTGGGATCCCAGGTTGATGACTTGACTGCT
GATTTCATCATAAGTCAGCTCTTATTTCTTGACGCCGAAGATTCTAAAAA
AGATATCAGGTTGTGTATTAATTCACCTGGTGGCTCTGTTACTGCTGGAA
TGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGTNNTCACTATT
TGCTTGGGGCTTGCTGCATCTATGGGTGCATTCCTGCTAGCAGCTGGGTT
CAAAGGGAAGAGATATTGCATGCCTAATGCAAGAAGTATGATCCATCNAN
CTCCTGGGGACTGCTGGAGGCAAAGCAACAGATATGAGCATACGGATTAA
AGAGATGTCTTACCACAGGGTAAGGCTGACAAGATATTATCTAGAGCTAC
CGGAAAGGCTGTGCAGCAGATTGAGCTGGACACTGGACGTGATAATTTCA
TGGATGCTTGGGAAGCAAAGAATACGGGGTGGTAAATGCGTCTCCGGTGA
TGGGAGCCGGAATAGTGGCCCTATT
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