EY728480
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728480 vs. ExPASy Swiss-Prot
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.723e-34 Identity = 85/142 (59.86%), Postives = 97/142 (68.31%), Query Frame = 2 Query: 281 MGSSVLFPATSVTGVSWSRVQE----KCRRFCVRASLDANVSHMSVNAPKGLFPPEPEHYR*PKLKVAIIGAGLAGMSTAVELLDQGHQVDIYESRSFIGGRVGSFVD*RGG-IWKWACAFSWDGRESVPIDEKVGADRNYL 691 M SS +S GV +V+ + + F +R++LD VS MSVNAPKGLFPPEPEHYR PKLKVAIIGAGLAGMSTAVELLDQGH+VDIYESR FIGG+VGSFVD RG I F + +KVGAD N L Sbjct: 1 MASSTCLIHSSSFGVGGKKVKMNTMIRSKLFSIRSALDTKVSDMSVNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRQFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADENLL 142
BLAST of EY728480 vs. ExPASy Swiss-Prot
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=2 SV=3) HSP 1 Score: 145.591 bits (366), Expect = 3.839e-34 Identity = 86/138 (62.32%), Postives = 99/138 (71.74%), Query Frame = 2 Query: 281 MGSSVLFPATSVTGVSWSRVQEKCRRFCVRASLDANVSHMSVNAPKGLFPPEPEHYR*PKLKVAIIGAGLAGMSTAVELLDQGHQVDIYESRSFIGGRVGSFVD*RGG-IWKWACAFSWDGRESVPIDEKVGADRNYL 691 M SSV+F AT S S K RRF V +SLD++VS MSVNAPKGLFPPEP Y+ PKLKVAIIGAGLAGMSTAVELLDQGH+VDIY+SR+FIGG+VGSFVD RG I F + +KVGA++N L Sbjct: 1 MASSVVFAATG----SLSVPPLKSRRFYVNSSLDSDVSDMSVNAPKGLFPPEPVPYKGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLMKKVGAEKNLL 134
BLAST of EY728480 vs. ExPASy Swiss-Prot
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.250e-33 Identity = 84/151 (55.63%), Postives = 98/151 (64.90%), Query Frame = 2 Query: 287 SSVLFPATSVTGVSWS---------------RVQEKCRRFCVRASLDANVSHMSVNAPKGLFPPEPEHYR*PKLKVAIIGAGLAGMSTAVELLDQGHQVDIYESRSFIGGRVGSFVD*RGG-IWKWACAFSWDGRESVPIDEKVGADRNYL 691 +S+ FPATS G S + K R+ VR+ LD +VS M NAPKGLFPPEPEHYR PKLKVAIIGAGLAGMSTAVELLDQGH+VDIYESR+FIGG+VGSFVD +G I F + +KVGA++N L Sbjct: 10 TSLCFPATSAAGARTSFRTTDTFLRYRRSRQLTRLKVRKAVVRSDLDRDVSDMRTNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKQGNHIEMGLHVFFGCYNNLFRLLKKVGAEKNLL 160
BLAST of EY728480 vs. ExPASy Swiss-Prot
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=ZDS PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.544e-33 Identity = 77/114 (67.54%), Postives = 87/114 (76.32%), Query Frame = 2 Query: 353 RRFCVRASLDANVSHMSVNAPKGLFPPEPEHYR*PKLKVAIIGAGLAGMSTAVELLDQGHQVDIYESRSFIGGRVGSFVD*RGG-IWKWACAFSWDGRESVPIDEKVGADRNYL 691 R+ +RA LD+ VS MS NAPKGLFPPEPEHYR PKLKVAIIGAGLAGMSTAVELLDQGH+VDIYESR+FIGG+VGSFVD RG I F + +KVGA++N L Sbjct: 44 RKSVIRADLDSMVSDMSTNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLLKKVGAEKNLL 157
BLAST of EY728480 vs. ExPASy Swiss-Prot
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=ZDS PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.693e-32 Identity = 75/110 (68.18%), Postives = 85/110 (77.27%), Query Frame = 2 Query: 365 VRASLDANVSHMSVNAPKGLFPPEPEHYR*PKLKVAIIGAGLAGMSTAVELLDQGHQVDIYESRSFIGGRVGSFVD*RGG-IWKWACAFSWDGRESVPIDEKVGADRNYL 691 +RA L++ VS MS NAPKGLFPPEPEHYR PKLKVAIIGAGLAGMSTAVELLDQGH+VDIYESR+FIGG+VGSFVD RG I F + +KVGA++N L Sbjct: 48 IRADLNSMVSDMSTNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGAEKNLL 157
BLAST of EY728480 vs. ExPASy Swiss-Prot
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.758e-24 Identity = 62/91 (68.13%), Postives = 68/91 (74.73%), Query Frame = 2 Query: 422 LFPPEPEHYR*PKLKVAIIGAGLAGMSTAVELLDQGHQVDIYESRSFIGGRVGSFVD*RGG-IWKWACAFSWDGRESVPIDEKVGADRNYL 691 LFPPEPEHYR PKLKVAIIGAGLAGMSTAVELLDQGH+VD+YESR FIGG+VGSFVD +G I F + +KVGAD N L Sbjct: 52 LFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDLYESRPFIGGKVGSFVDRQGNHIEMGLHVFFGCYSNLFRLMKKVGADNNLL 142
BLAST of EY728480 vs. ExPASy Swiss-Prot
Match: ZDS_SYNY3 (Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803) GN=crtQ PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.054e-16 Identity = 32/44 (72.73%), Postives = 43/44 (97.73%), Query Frame = 2 Query: 461 LKVAIIGAGLAGMSTAVELLDQGHQVDIYESRSFIGGRVGSFVD 592 ++VAI+GAGLAGM+TAVEL+D GH+V++YE+RSFIGG+VGS+VD Sbjct: 1 MRVAIVGAGLAGMATAVELVDAGHEVELYEARSFIGGKVGSWVD 44 HSP 2 Score: 29.6462 bits (65), Expect = 6.054e-16 Identity = 19/62 (30.65%), Postives = 29/62 (46.77%), Query Frame = 3 Query: 627 FLGMVGNLFRLMKKSG-RTEITCEGSDSSLLNPGG*DG*TEVRVPIASPRRGIRALLWPSSL 809 F G NLF LM+K G + + + + +N GG G + R +P G++A S L Sbjct: 57 FFGCYYNLFNLMEKVGAKQNLRLKEHTHTFVNQGGRIGELDFRFLTGAPFNGLKAFFTTSQL 118 HSP 3 Score: 21.9422 bits (45), Expect = 6.054e-16 Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 1 Query: 604 HMEMGLRVFLG 636 H+EMGL VF G Sbjct: 49 HIEMGLHVFFG 59 The following BLAST results are available for this feature:
BLAST of EY728480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728480 ID=EY728480; Name=EY728480; organism=Citrus sinensis; type=EST; length=930bpback to top |