EY728472

Overview
NameEY728472
Unique NameEY728472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728472 vs. ExPASy Swiss-Prot
Match: PAP8_ARATH (Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 6.867e-65
Identity = 129/214 (60.28%), Postives = 158/214 (73.83%), Query Frame = 1 
Query:   31 SKPINASFSASLPCK----RSPRTALKIVRAVSISSPDLRTGPDDLVASILSKVNQSDGGVSLXXXXXXXXXXXXXXLQKYCVEAPVKCPLIFGEWDVVYCSVPTSPGGGYRSAFGRLFFKTKEMIQAVEAPDTVRNKVSFTALGFLDGEVSLKGKLNALDEKWIQVVFEPPELKVGGLEFRYGGQSEVELRITSVHENIRLGV--RLTSFVFR 654
            S+ +N     S+P K    RS R  L +V +VS  + +LRTGPDDL++++LSKV  SDGGV+L              LQKYCV+ PVK PLIFG+W+VVYCS PTSPGGGYRS  GRLFFKTKEMIQA++APD VRNKVS  A GFLDG+VSL GKL ALD +W+QV+FEPPE+KVG LEF+YG +SEV+LRIT V E +RLG+  + + FVFR
Sbjct:   24 SRRLNLPLQYSIPYKVLRSRSRRLGL-VVSSVSAPNVELRTGPDDLISTLLSKVANSDGGVTLSPEQHKEVAQVAGELQKYCVKEPVKNPLIFGDWEVVYCSRPTSPGGGYRSVIGRLFFKTKEMIQAIDAPDIVRNKVSINAFGFLDGDVSLTGKLKALDSEWVQVIFEPPEIKVGSLEFKYGFESEVKLRITYVDEKLRLGLGSKGSLFVFR 236
The following BLAST results are available for this feature:
BLAST of EY728472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PAP8_ARATH6.867e-6560.28Probable plastid-lipid-associated protein 8, chlor... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728472 ID=EY728472; Name=EY728472; organism=Citrus sinensis; type=EST; length=898bp
CCACGCGTCCGATTCTGCACAAGTTATTATTCAAAACCCATAAACGCAAG
TTTTTCAGCTTCACTTCCTTGCAAAAGAAGTCCTCGCACCGCACTGAAAA
TCGTCAGGGCTGTTTCCATCTCCAGCCCAGATCTGCGAACCGGTCCCGAC
GATTTGGTTGCTTCTATCCTCTCCAAGGTGAACCAATCGGATGGAGGAGT
TTCACTAGCCAAAGAAGAACACAAAGAGGTCGCTGAAGTTGCTCAAGAGT
TGCAAAAATATTGTGTTGAAGCACCAGTAAAATGCCCTTTAATCTTTGGA
GAATGGGATGTCGTGTACTGTTCAGTGCCAACTTCACCTGGGGGTGGCTA
CAGAAGTGCATTTGGCCGTCTTTTCTTCAAAACAAAGGAAATGATTCAGG
CTGTTGAAGCTCCTGACACTGTTAGAAACAAGGTTTCCTTCACCGCTCTG
GGTTTTCTTGACGGAGAGGTCTCTTTGAAAGGAAAGCTTAATGCTCTGGA
TGAGAAATGGATTCAAGTTGTATTTGAGCCACCTGAACTGAAAGTTGGAG
GATTGGAGTTCCGATATGGCGGTCAGAGTGAGGTTGAGTTGCGGATTACG
TCCGTACATGAAAACATCAGGCTTGGGGTTAGGTTGACAAGTTTCGTATT
TCGTTTGTCGGATACCCCACCAGCGGGCGTAGGTGGGGGGAGTTAAGGTG
TGCCGCGGCGTGCCGGGAGCGGGGGGGCTGCGTCGGATTGCGGGCTGTGC
GCTGGGTGGCGAGGGGGCGGGAGAGGTGGGTGAGGCGCTGTGCGGAGTGG
CGTGGCATGGATCGTAGGCCGCCCGCGGTGGTGGAGTGGTGGGGGCGTAG
GTAGGCGTGGTTGCGGGGTGCCGCCGAGAACGGGGGTAGTGGGGGGGG
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