EY728471
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728471 vs. ExPASy Swiss-Prot
Match: ETUD1_MOUSE (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Mus musculus GN=Eftud1 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.183e-24 Identity = 59/139 (42.45%), Postives = 82/139 (58.99%), Query Frame = 3 Query: 66 ETSQQSEQ-----HGIFSGAVMTAVKDACIQAVLKKKPRLVETMYFCELNTPVDSLSKMYGVVSPRRARVLKEEMLEGSALFTGHAYLPVSESIGFADELRKETXXXXXXXXXXXHWEELPEDPFFVPETGEDRGEHGD 467 ETSQ+ + +G FSG ++ +K+AC A+ K RL+ MY C++ D L ++Y V+S R RVL+EEM EG+ +F A LPV+ES GFADE+RK T HWE +P DPF+VP T E+ G+ Sbjct: 948 ETSQKGDSPVIDCYGPFSGQLIATMKEACRYALQVKPQRLMAAMYTCDIMATSDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVIPSDPFWVPTTEEEYLHFGE 1086
BLAST of EY728471 vs. ExPASy Swiss-Prot
Match: ETUD1_HUMAN (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Homo sapiens GN=EFTUD1 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 7.135e-24 Identity = 59/141 (41.84%), Postives = 82/141 (58.16%), Query Frame = 3 Query: 60 DSETSQQSEQ-----HGIFSGAVMTAVKDACIQAVLKKKPRLVETMYFCELNTPVDSLSKMYGVVSPRRARVLKEEMLEGSALFTGHAYLPVSESIGFADELRKETXXXXXXXXXXXHWEELPEDPFFVPETGEDRGEHGD 467 + TSQ+ E +G FSG ++ +K+AC A+ K RL+ MY C++ D L ++Y V+S R RVL+EEM EG+ +F A LPV+ES GFADE+RK T HWE +P DPF+VP T E+ G+ Sbjct: 939 EKRTSQKGESPLTDCYGPFSGQLIATMKEACRYALQVKPQRLMAAMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGE 1079
BLAST of EY728471 vs. ExPASy Swiss-Prot
Match: RIA1_YEAST (Ribosome assembly protein 1 OS=Saccharomyces cerevisiae GN=RIA1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.303e-17 Identity = 47/138 (34.06%), Postives = 79/138 (57.25%), Query Frame = 3 Query: 57 VDSETSQQSEQHGI-FSGAVMTAVKDACIQAVLKKKPRLVETMYFCELNTPVDSLSKMYGVVSPRRARVLKEEMLEGSALFTGHAYLPVSESIGFADELRKETXXXXXXXXXXXHWEELPEDPFFVPETGEDRGEHGD 467 ++S + +QH + SG ++T+ +DA +A L PR++ +Y C++ T VD L K+Y V+ R +++ EEM EG+ F A++PV E+ G ++++RK T +E + DPF+VP T E+ E GD Sbjct: 933 IESIEDPRYQQHIVDLSGRLITSTRDAIHEAFLDWSPRIMWAIYSCDIQTSVDVLGKVYAVILQRHGKIISEEMKEGTPFFQIEAHVPVVEAFGLSEDIRKRTSGAAQPQLVFSGFECIDLDPFWVPTTEEELEELGD 1070
BLAST of EY728471 vs. ExPASy Swiss-Prot
Match: RIA1_SCHPO (Ribosome assembly protein 1 OS=Schizosaccharomyces pombe GN=ria1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.441e-16 Identity = 48/121 (39.67%), Postives = 68/121 (56.20%), Query Frame = 3 Query: 105 GAVMTAVKDACIQAVLKKKPRLVETMYFCELNTPVDSLSKMYGVVSPRRARVLKEEMLEGSALFTGHAYLPVSESIGFADELRKETXXXXXXXXXXXHWEELPEDPFFVPETGEDRGEHGD 467 G V++ VK++ L PRL+ MY C++ + L ++YGVVS RR RV+ EEM EG+ F A +PV ES GFA E+ K T +E L E+PF+VP T E+ + G+ Sbjct: 841 GQVISVVKESIRHGFLGWSPRLMLAMYSCDVQATSEVLGRVYGVVSKRRGRVIDEEMKEGTPFFIVKALIPVVESFGFAVEILKRTSGAAYPQLIFHGFEMLDENPFWVPTTEEELEDLGE 961
BLAST of EY728471 vs. ExPASy Swiss-Prot
Match: EF2_DROME (Elongation factor 2 OS=Drosophila melanogaster GN=Ef2b PE=1 SV=4) HSP 1 Score: 81.2629 bits (199), Expect = 7.907e-15 Identity = 38/106 (35.85%), Postives = 57/106 (53.77%), Query Frame = 3 Query: 105 GAVMTAVKDACIQAVLKKKPRLVETMYFCELNTPVDSLSKMYGVVSPRRARVLKEEMLEGSALFTGHAYLPVSESIGFADELRKETXXXXXXXXXXXHWEELPEDP 422 G ++ + A + KPRL+E +Y CE+ P ++ +YGV++ RR V +E + G+ +F AYLPV+ES GF +LR T HW+ LP DP Sbjct: 705 GQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 810
BLAST of EY728471 vs. ExPASy Swiss-Prot
Match: EF2_BOMMO (Translation elongation factor 2 OS=Bombyx mori GN=tef2 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.005e-14 Identity = 37/106 (34.91%), Postives = 57/106 (53.77%), Query Frame = 3 Query: 105 GAVMTAVKDACIQAVLKKKPRLVETMYFCELNTPVDSLSKMYGVVSPRRARVLKEEMLEGSALFTGHAYLPVSESIGFADELRKETXXXXXXXXXXXHWEELPEDP 422 G ++ + +L +PRL+E +Y CE+ P ++ +YGV++ RR V +E + G+ +F AYLPV+ES GF +LR T HW+ LP DP Sbjct: 705 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 810
BLAST of EY728471 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4) HSP 1 Score: 78.1814 bits (191), Expect = 6.694e-14 Identity = 37/107 (34.58%), Postives = 57/107 (53.27%), Query Frame = 3 Query: 105 GAVMTAVKDACIQAVLKKKPRLVETMYFCELNTPVDSLSKMYGVVSPRRARVLKEEMLEGSALFTGHAYLPVSESIGFADELRKETXXXXXXXXXXXHWEELPEDPF 425 G ++ + +VL +PRL+E +Y E+ P + +YGV++ +R V +E + G+ +F AYLPV+ES GF +LR T HW+ LP DPF Sbjct: 719 GQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPF 825
BLAST of EY728471 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 6.694e-14 Identity = 37/107 (34.58%), Postives = 57/107 (53.27%), Query Frame = 3 Query: 105 GAVMTAVKDACIQAVLKKKPRLVETMYFCELNTPVDSLSKMYGVVSPRRARVLKEEMLEGSALFTGHAYLPVSESIGFADELRKETXXXXXXXXXXXHWEELPEDPF 425 G ++ + +VL +PRL+E +Y E+ P + +YGV++ +R V +E + G+ +F AYLPV+ES GF +LR T HW+ LP DPF Sbjct: 719 GQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPF 825
BLAST of EY728471 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.694e-14 Identity = 37/107 (34.58%), Postives = 57/107 (53.27%), Query Frame = 3 Query: 105 GAVMTAVKDACIQAVLKKKPRLVETMYFCELNTPVDSLSKMYGVVSPRRARVLKEEMLEGSALFTGHAYLPVSESIGFADELRKETXXXXXXXXXXXHWEELPEDPF 425 G ++ + +VL +PRL+E +Y E+ P + +YGV++ +R V +E + G+ +F AYLPV+ES GF +LR T HW+ LP DPF Sbjct: 719 GQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPF 825
BLAST of EY728471 vs. ExPASy Swiss-Prot
Match: EF2_MESAU (Elongation factor 2 OS=Mesocricetus auratus GN=EEF2 PE=2 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 6.694e-14 Identity = 37/107 (34.58%), Postives = 57/107 (53.27%), Query Frame = 3 Query: 105 GAVMTAVKDACIQAVLKKKPRLVETMYFCELNTPVDSLSKMYGVVSPRRARVLKEEMLEGSALFTGHAYLPVSESIGFADELRKETXXXXXXXXXXXHWEELPEDPF 425 G ++ + +VL +PRL+E +Y E+ P + +YGV++ +R V +E + G+ +F AYLPV+ES GF +LR T HW+ LP DPF Sbjct: 719 GQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPF 825 The following BLAST results are available for this feature:
BLAST of EY728471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728471 ID=EY728471; Name=EY728471; organism=Citrus sinensis; type=EST; length=860bpback to top |