EY728470

Overview
NameEY728470
Unique NameEY728470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_MYXXA (GTP pyrophosphokinase OS=Myxococcus xanthus GN=relA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.770e-23
Identity = 52/134 (38.81%), Postives = 85/134 (63.43%), Query Frame = 1
Query:   25 RISWLNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLREQ 420
            + +WL  + EWQ++       +EF++T+  DL    VFVFTP+G++++LP+GAT VD+AY IH+++GN+ V AKVNG +V   + + N + VE++T        + Q+H  K WL   KT  A+ +I  F+++Q
Sbjct:  375 KFAWLRQLMEWQQDL---KDPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGAKVNGKIVPLRYKMKNGDTVEVLT--------SPQQHPSKDWLTFVKTSRAQQRIRGFIKQQ 497          
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_BACSU (GTP pyrophosphokinase OS=Bacillus subtilis GN=relA PE=3 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 8.399e-23
Identity = 51/132 (38.64%), Postives = 85/132 (64.39%), Query Frame = 1
Query:   25 RISWLNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 420
            ++SW   I E+Q E   +  + EF++++  DL    V+VFTP+G++  LP G+  +D++Y IH+EIGNK + AKVNG +V+  H L   ++VEI+T     SK ++   + W++ A+T  A+HKI +F ++Q
Sbjct:  361 KLSWFREILEFQNE---STDAEEFMESLKIDLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGDIVEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 484          
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_STREQ (Putative GTP pyrophosphokinase OS=Streptococcus equisimilis GN=relA PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.019e-21
Identity = 50/137 (36.50%), Postives = 83/137 (60.58%), Query Frame = 1
Query:   10 ADAWVRISWLNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 420
            A+  V ++W+  + E Q+   G+    +FVD++  D+   R++VFTP G ++ LPK +  +D+AY IHT++G K + AKVNG +V  T  L   +VVEI+T     + ++F   + W++  KT  AR+KI +F + Q
Sbjct:  356 AEQKVGMNWIKELVELQDASNGDAV--DFVDSVKEDIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAIGAKVNGRMVPLTAKLKTGDVVEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485          
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_STAAW (GTP pyrophosphokinase OS=Staphylococcus aureus (strain MW2) GN=relA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.655e-20
Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 1
Query:   37 LNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 420
            LN ++E  E    +  ++EF++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   ++L   ++VEI T     SK ++   + WL+  K+ SA+ KI  F ++Q
Sbjct:  370 LNWLKELAEADHTSSDAQEFMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492          
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_STAAU (GTP pyrophosphokinase OS=Staphylococcus aureus GN=relA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.655e-20
Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 1
Query:   37 LNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 420
            LN ++E  E    +  ++EF++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   ++L   ++VEI T     SK ++   + WL+  K+ SA+ KI  F ++Q
Sbjct:  370 LNWLKELAEADHTSSDAQEFMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492          
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_STAAS (GTP pyrophosphokinase OS=Staphylococcus aureus (strain MSSA476) GN=relA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.655e-20
Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 1
Query:   37 LNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 420
            LN ++E  E    +  ++EF++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   ++L   ++VEI T     SK ++   + WL+  K+ SA+ KI  F ++Q
Sbjct:  370 LNWLKELAEADHTSSDAQEFMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492          
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_STAAR (GTP pyrophosphokinase OS=Staphylococcus aureus (strain MRSA252) GN=relA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.655e-20
Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 1
Query:   37 LNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 420
            LN ++E  E    +  ++EF++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   ++L   ++VEI T     SK ++   + WL+  K+ SA+ KI  F ++Q
Sbjct:  370 LNWLKELAEADHTSSDAQEFMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492          
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_STAAN (GTP pyrophosphokinase OS=Staphylococcus aureus (strain N315) GN=relA PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.655e-20
Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 1
Query:   37 LNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 420
            LN ++E  E    +  ++EF++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   ++L   ++VEI T     SK ++   + WL+  K+ SA+ KI  F ++Q
Sbjct:  370 LNWLKELAEADHTSSDAQEFMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492          
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_STAAM (GTP pyrophosphokinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=relA PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.655e-20
Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 1
Query:   37 LNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 420
            LN ++E  E    +  ++EF++T+  DL   +V+ FTP  ++  LP GA  +D+AY IH+E+GNKM+ AKVNG +V   ++L   ++VEI T     SK ++   + WL+  K+ SA+ KI  F ++Q
Sbjct:  370 LNWLKELAEADHTSSDAQEFMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492          
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: SPOT_AQUAE (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Aquifex aeolicus GN=spoT PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.483e-19
Identity = 57/130 (43.85%), Postives = 76/130 (58.46%), Query Frame = 1
Query:   31 SWLNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 420
            SWL   RE  E   G+    E ++ +  +L    VFVFTP+G++  LPKG+T VD AY IHTE+GN    AK NG +V   + L + +VVEIIT N   S S      +WL   KT  AR+KI +FL++Q
Sbjct:  356 SWL---RELVESIQGSTNPSEVLENLKSNLFFEEVFVFTPKGDLVVLPKGSTPVDLAYKIHTEVGNHCAGAKSNGRIVPLNYELKSGDVVEIIT-NPNKSPS-----YEWLSFVKTSRARNKIKQFLKKQ 476          
The following BLAST results are available for this feature:
BLAST of EY728470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RELA_MYXXA3.770e-2338.81GTP pyrophosphokinase OS=Myxococcus xanthus GN=rel... [more]
RELA_BACSU8.399e-2338.64GTP pyrophosphokinase OS=Bacillus subtilis GN=relA... [more]
RELA_STREQ6.019e-2136.50Putative GTP pyrophosphokinase OS=Streptococcus eq... [more]
RELA_STAAW6.655e-2038.28GTP pyrophosphokinase OS=Staphylococcus aureus (st... [more]
RELA_STAAU6.655e-2038.28GTP pyrophosphokinase OS=Staphylococcus aureus GN=... [more]
RELA_STAAS6.655e-2038.28GTP pyrophosphokinase OS=Staphylococcus aureus (st... [more]
RELA_STAAR6.655e-2038.28GTP pyrophosphokinase OS=Staphylococcus aureus (st... [more]
RELA_STAAN6.655e-2038.28GTP pyrophosphokinase OS=Staphylococcus aureus (st... [more]
RELA_STAAM6.655e-2038.28GTP pyrophosphokinase OS=Staphylococcus aureus (st... [more]
SPOT_AQUAE1.483e-1943.85Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-B12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728470 ID=EY728470; Name=EY728470; organism=Citrus sinensis; type=EST; length=892bp
CACGCGTCCGCGGACGCGTGGGTGAGGATTAGCTGGCTCAATGCAATTAG
AGAATGGCAAGAAGAGTTCGTGGGCAACATGACATCTAGAGAATTTGTAG
ATACCATTACAAGAGATCTCTTATGTAGTCGAGTCTTCGTTTTTACGCCA
AGGGGAGAGATTAAAAATCTGCCTAAAGGAGCGACAGTTGTTGACTATGC
TTACATGATACACACTGAAATTGGCAACAAGATGGTTGCTGCAAAGGTCA
ATGGGAATCTTGTTTCTCCAACACATGTGCTTGCCAATGCTGAAGTTGTG
GAGATAATCACCTATAATGCGCTCTCAAGTAAATCAGCTTTCCAAAGGCA
TAAGCAGTGGTTGGAACATGCTAAAACACGAAGTGCCAGACACAAAATTA
TGAAGTTTTTAAGGGAGCAAGCTGCACTATCTGCTTCAGAAATTACAGCA
GATACTGTAGGTGACTTCGTTGCTGATTCTGGAGAGGAGAGTGAAGTATA
AGATCTCTCAGATGGTTCCGAACAGGACAAACCTTTGTGGGAGAAAATCT
TATGAATGTTGTCCAAATGTGCGTCACTGTCAGAAATTCTAAAGCTGTCT
GTTCTGATGACAATGCTAGCCTTTGGGCTCCACAAGTTCACGGAAAACAT
AACAAGCGTGTGCATTATGTTGGTTCAAAAGCTGAGGGGGGAGTTGTCAT
CTCAAGAACATAGTTTTGCCAAATGATGCATGCTACTGTTCCAATGTATA
GGGAAATTTGCCCGGATTATAAACTGGCAACCCGTTAAATGCGGTTTGGC
CAACTGGAGGGGCCCCTATCCAAGGTTAATGTGGGTGGTAAACCAAAAGG
GTCCTGGGTGACTCCAAGGCATGGGACTGTTGGGGGACCAAA
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